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Report for Sequence Feature Glyma.18g005600

Feature Type:gene_model
Chromosome:Gm18
Start:425934
stop:431714
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.18g005600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G43270.2AT SPL2 JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
KOG0004 KOG Ubiquitin/40S ribosomal protein S27a fusion JGI N/AIEA
PTHR31251PantherFam SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 JGI N/AIEA
PF03110Pfam SBP domain JGI N/AIEA

Gene model name correspondences to Glyma.18g005600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g00903 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g005600
>Glyma.18g005600.4 sequence-type=CDS polypeptide=Glyma.18g005600.4.p locus=Glyma.18g005600 id=Glyma.18g005600.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGTGGAATGCAAAATCTCTCGGGCAATGGGACTGGGAGCACTTATTCTTCAATACAAAAGCAGCTGAGAATCCAAGGTTACAACCAACTGATTGTAGCAGTGAAGCAGATCCAGAAATCAATGTTGGACTGTTGTATCCATCAGGTGGTAGTGCTTGTTCTGGCTCTGAACTAATACATGCTTCTTCATCAAGGAGCTCAAAATCAGCTTCCAACAATTCATCATCAAATGGGGATAGCAGGGAATCTATATTGACTCTGGAAGGTTCTCAGGATGATTCCACTGGGAAGAAAGAATTGTGCAATGGAGAGCCGGTTGAAACTTCTCCAGCAGCAGTGCCCTCTCCTGTCTCTGGTGAACCATTGCTCACTCTAAAGCTTGGTAAACGATTGTACTTTGAGGATGTCTGCACCGGAAGTGATTCCAAGAAACCATCTTCCTTTGAGGTTCCCATTTTATCAGGGAAGAAATATAAAACAAGTAGTCAGACTGTACAGCATCCAAGCTGCCAGGTGGAAGGCTGTGGCCTTGACCTCTCATCTGCTAAAGATTACCATCGCAAACACAGAGTTTGTGAAGCTCATTCCAAATCCCCTAAGGTGGTTATAGCTGGTTTGGAACGTCGATTTTGCCAGCAATGTAGCAGGTTCCATGCTCTGTCAGAGTTTGATGACAAAAAAAGAAGCTGTAGGCAACGACTTTCAGATCACAATGCAAGGCGCCGCAAAACTCAGCCTGACTCAATCCAATTAAATCCATCAGCTTTGTCTTCATCTCCCTATGATGGGAGGCAAATAATGAGCCCATTTGCATTTTCAAGGACTGCTACAAATTTAGCTTGGCAAGATATGCACAGCAGCAAGCACCCCCAAACAAAAGAATTCCTCCCGAAGCCTGCCAAAGCCTTCAATAAGATACCGAGTATAGTCTCTATGCTTTCTGATGATTCCAGTGGCCTTCTAACATCTAGAGGCATAGCAACGAAGAGTATTGTTCCAGGTATGGAAGTTCCAAATGGTACACAAGATGTTAACCGTGCTCTCTCTCTTCTGTCAACGAATTCATCATGGTGTCCATATGAGACCAAGTCCCTTTCTCTGGAACACTCCACTCGGACAACACACTCAATCACTCAGCATCGTTTACCACTTCCTTCCTCGGAGTATTGGCACACTGATCAACAAAATTCAAGCATGTGTATCTCATTCTCGGATTGCGATAGCAGCAATCGCTTTCAAGACTTTCAGCTCTTGAGCTCACCCTATGAATCAGGTTTTCCGTGCAACCAACTGGATTAA

>Glyma.18g005600.7 sequence-type=CDS polypeptide=Glyma.18g005600.7.p locus=Glyma.18g005600 id=Glyma.18g005600.7.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGTGGAATGCAAAATCTCTCGGGCAATGGGACTGGGAGCACTTATTCTTCAATACAAAAGCAGCTGAGAATCCAAGGTTACAACCAACTGATTGTAGCAGTGAAGCAGATCCAGAAATCAATGTTGGACTGTTGTATCCATCAGGTGGTAGTGCTTGTTCTGGCTCTGAACTAATACATGCTTCTTCATCAAGGAGCTCAAAATCAGCTTCCAACAATTCATCATCAAATGGGGATAGCAGGGAATCTATATTGACTCTGGAAGGTTCTCAGGATGATTCCACTGGGAAGAAAGAATTGTGCAATGGAGAGCCGGTTGAAACTTCTCCAGCAGCAGTGCCCTCTCCTGTCTCTGGTGAACCATTGCTCACTCTAAAGCTTGGTAAACGATTGTACTTTGAGGATGTCTGCACCGGAAGTGATTCCAAGAAACCATCTTCCTTTGAGGTTCCCATTTTATCAGGGAAGAAATATAAAACAAGTAGTCAGACTGTACAGCATCCAAGCTGCCAGGTGGAAGGCTGTGGCCTTGACCTCTCATCTGCTAAAGATTACCATCGCAAACACAGAGTTTGTGAAGCTCATTCCAAATCCCCTAAGGTGGTTATAGCTGGTTTGGAACGTCGATTTTGCCAGCAATGTAGCAGGTTCCATGCTCTGTCAGAGTTTGATGACAAAAAAAGAAGCTGTAGGCAACGACTTTCAGATCACAATGCAAGGCGCCGCAAAACTCAGCCTGACTCAATCCAATTAAATCCATCAGCTTTGTCTTCATCTCCCTATGATGGGAGGCAAATAATGAGCCCATTTGCATTTTCAAGGACTGCTACAAATTTAGCTTGGCAAGATATGCACAGCAGCAAGCACCCCCAAACAAAAGAATTCCTCCCGAAGCCTGCCAAAGCCTTCAATAAGATACCGAGTATAGTCTCTATGCTTTCTGATGATTCCAGTGGCCTTCTAACATCTAGAGGCATAGCAACGAAGAGTATTGTTCCAGGTATGGAAGTTCCAAATGGTACACAAGATGTTAACCGTGCTCTCTCTCTTCTGTCAACGAATTCATCATGGTGTCCATATGAGACCAAGTCCCTTTCTCTGGAACACTCCACTCGGACAACACACTCAATCACTCAGCATCGTTTACCACTTCCTTCCTCGGAGTATTGGCACACTGATCAACAAAATTCAAGCATGTGTATCTCATTCTCGGATTGCGATAGCAGCAATCGCTTTCAAGACTTTCAGCTCTTGAGCTCACCCTATGAATCAGGTTTTCCGTGCAACCAACTGGATTAA
Predicted protein sequences of Glyma.18g005600
>Glyma.18g005600.4.p sequence-type=predicted peptide transcript=Glyma.18g005600.4 locus=Glyma.18g005600 id=Glyma.18g005600.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEWNAKSLGQWDWEHLFFNTKAAENPRLQPTDCSSEADPEINVGLLYPSGGSACSGSELIHASSSRSSKSASNNSSSNGDSRESILTLEGSQDDSTGKKELCNGEPVETSPAAVPSPVSGEPLLTLKLGKRLYFEDVCTGSDSKKPSSFEVPILSGKKYKTSSQTVQHPSCQVEGCGLDLSSAKDYHRKHRVCEAHSKSPKVVIAGLERRFCQQCSRFHALSEFDDKKRSCRQRLSDHNARRRKTQPDSIQLNPSALSSSPYDGRQIMSPFAFSRTATNLAWQDMHSSKHPQTKEFLPKPAKAFNKIPSIVSMLSDDSSGLLTSRGIATKSIVPGMEVPNGTQDVNRALSLLSTNSSWCPYETKSLSLEHSTRTTHSITQHRLPLPSSEYWHTDQQNSSMCISFSDCDSSNRFQDFQLLSSPYESGFPCNQLD*

>Glyma.18g005600.7.p sequence-type=predicted peptide transcript=Glyma.18g005600.7 locus=Glyma.18g005600 id=Glyma.18g005600.7.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEWNAKSLGQWDWEHLFFNTKAAENPRLQPTDCSSEADPEINVGLLYPSGGSACSGSELIHASSSRSSKSASNNSSSNGDSRESILTLEGSQDDSTGKKELCNGEPVETSPAAVPSPVSGEPLLTLKLGKRLYFEDVCTGSDSKKPSSFEVPILSGKKYKTSSQTVQHPSCQVEGCGLDLSSAKDYHRKHRVCEAHSKSPKVVIAGLERRFCQQCSRFHALSEFDDKKRSCRQRLSDHNARRRKTQPDSIQLNPSALSSSPYDGRQIMSPFAFSRTATNLAWQDMHSSKHPQTKEFLPKPAKAFNKIPSIVSMLSDDSSGLLTSRGIATKSIVPGMEVPNGTQDVNRALSLLSTNSSWCPYETKSLSLEHSTRTTHSITQHRLPLPSSEYWHTDQQNSSMCISFSDCDSSNRFQDFQLLSSPYESGFPCNQLD*






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