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Report for Sequence Feature Glyma.18G273600

Feature Type:gene_model
Chromosome:Gm18
Start:55909695
stop:55918160
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.18G273600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G60910.1AT AGL8,FUL JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0003700GO-mf DNA-binding transcription factor activity JGI N/AIEA
GO:0046983GO-mf protein dimerization activity JGI N/AIEA
K09264KEGG Transcription factors JGI N/AIEA
KOG0014 KOG MADS box transcription factor JGI N/AIEA
PTHR11945PantherFam MADS BOX PROTEIN JGI N/AIEA
PF00319Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) JGI N/AIEA
PF01486Pfam K-box region JGI N/AIEA

Proteins Associated with Glyma.18G273600
LocusGene SymbolProtein Name
DT2 MADS-box protein Dt2

Gene model name correspondences to Glyma.18G273600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.18g273600 Wm82.a4.v1ISS As supplied by JGI
Glyma18g50910 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18G273600
>Glyma.18g273600.1 sequence-type=CDS polypeptide=Glyma.18g273600.1.p locus=Glyma.18g273600 id=Glyma.18g273600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGAAGGGGTAGGGTTCAGCTGAAGCGGATCGAGAACAAAACAAGCCAGCAAGTGACGTTTTTCAAGCGTAGATCGGGACTTCTCAAGAAAGCCAGCGAAATCTCTGTGCTATGTGATGCTCAAGTTGCTTTGATTATATTTTCTACCAAAGGCAAACTTTTTGAGTATTCCTCTGAACGCAGCATGGAAGACCTCCTTGAACGTTACGAGAGATGTAGCCATACAGCACTTGCTGGAGCTAACAATGTCGAATCACCGGGATTTTGGTCTTTCGAACATATCAAGCTCACCGCTAAAGTTGAAGTCTTGGAGAGGAACATAATGAATTTCTTTGGAAATGATCTGGATCCCTTGAGTTTGAAAGAGCTTCACAGTTTGGAGCAGCAGATTGAGACATCTCTGAAGCGCATCCGAACTAGAAAGAATCAAGTTATGAATCAATCCGTCTCAGACCTGCATAAAAAGGCAAGGACATTACAAGTGCAAAACAGATGGCTAGGAAAGATGAAGGAGAAAGCGAAGACAGTGACTGAAGGTCCACACAACGGCCCAGAAACTCTAGGCTTTGATTCATCCACACTCAACTTATCTTCTCCACAGCTACCACCACCACCATCACCACAAAGACTGGTTCCTTCTCTAACTCTCAGTGAGACAATGCAAGGAGGAACACCAGTGGAAGAAACGGGTGAGGCTCAAACAGTCCCTAGTGGCAATTCTCTCATCCCACCATGGATGCTGCGCTGCATGTCTGACTAG

>Glyma.18g273600.2 sequence-type=CDS polypeptide=Glyma.18g273600.2.p locus=Glyma.18g273600 id=Glyma.18g273600.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTACTTATTCCTTAACCCTCCTGTTACCCTTTTTAGCTATTTCTATTTGTGCTGCTTTCATAGAATTGCTAGTTACGTGGGAGAATTAAGCACCAAGAAGATGGGAAGGGGTAGGGTTCAGCTGAAGCGGATCGAGAACAAAACAAGCCAGCAAGTGACGTTTTTCAAGCGTAGATCGGGACTTCTCAAGAAAGCCAGCGAAATCTCTGTGCTATGTGATGCTCAAGTTGCTTTGATTATATTTTCTACCAAAGGCAAACTTTTTGAGTATTCCTCTGAACGCAGCATGGAAGACCTCCTTGAACGTTACGAGAGATGTAGCCATACAGCACTTGCTGGAGCTAACAATGTCGAATCACCGGGATTTTGGTCTTTCGAACATATCAAGCTCACCGCTAAAGTTGAAGTCTTGGAGAGGAACATAATGAATTTCTTTGGAAATGATCTGGATCCCTTGAGTTTGAAAGAGCTTCACAGTTTGGAGCAGCAGATTGAGACATCTCTGAAGCGCATCCGAACTAGAAAGAATCAAGTTATGAATCAATCCGTCTCAGACCTGCATAAAAAGGCAAGGACATTACAAGTGCAAAACAGATGGCTAGGAAAGATGAAGGAGAAAGCGAAGACAGTGACTGAAGGTCCACACAACGGCCCAGAAACTCTAGGCTTTGATTCATCCACACTCAACTTATCTTCTCCACAGCTACCACCACCACCATCACCACAAAGACTGGTTCCTTCTCTAACTCTCAGTGAGACAATGCAAGGAGGAACACCAGTGGAAGAAACGGGTGAGGCTCAAACAGTCCCTAGTGGCAATTCTCTCATCCCACCATGGATGCTGCGCTGCATGTCTGACTAG
Predicted protein sequences of Glyma.18G273600
>Glyma.18g273600.1.p sequence-type=predicted peptide transcript=Glyma.18g273600.1 locus=Glyma.18g273600 id=Glyma.18g273600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGRGRVQLKRIENKTSQQVTFFKRRSGLLKKASEISVLCDAQVALIIFSTKGKLFEYSSERSMEDLLERYERCSHTALAGANNVESPGFWSFEHIKLTAKVEVLERNIMNFFGNDLDPLSLKELHSLEQQIETSLKRIRTRKNQVMNQSVSDLHKKARTLQVQNRWLGKMKEKAKTVTEGPHNGPETLGFDSSTLNLSSPQLPPPPSPQRLVPSLTLSETMQGGTPVEETGEAQTVPSGNSLIPPWMLRCMSD*

>Glyma.18g273600.2.p sequence-type=predicted peptide transcript=Glyma.18g273600.2 locus=Glyma.18g273600 id=Glyma.18g273600.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MYLFLNPPVTLFSYFYLCCFHRIASYVGELSTKKMGRGRVQLKRIENKTSQQVTFFKRRSGLLKKASEISVLCDAQVALIIFSTKGKLFEYSSERSMEDLLERYERCSHTALAGANNVESPGFWSFEHIKLTAKVEVLERNIMNFFGNDLDPLSLKELHSLEQQIETSLKRIRTRKNQVMNQSVSDLHKKARTLQVQNRWLGKMKEKAKTVTEGPHNGPETLGFDSSTLNLSSPQLPPPPSPQRLVPSLTLSETMQGGTPVEETGEAQTVPSGNSLIPPWMLRCMSD*






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