SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.17g259000

Feature Type:gene_model
Chromosome:Gm17
Start:41411921
stop:41417844
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.17g259000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G20080.1AT ATSYTB,NTMC2T1.2,NTMC2TYPE1.2,SYT2,SYTB JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
KOG1012 KOG Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain JGI N/AIEA
PTHR10774PantherFam EXTENDED SYNAPTOTAGMIN-RELATED JGI N/AIEA
PF00168Pfam C2 domain JGI N/AIEA
PF17047Pfam Synaptotagmin-like mitochondrial-lipid-binding domain JGI N/AIEA

Proteins Associated with Glyma.17g259000
LocusGene SymbolProtein Name
C2-155 C2 domain containing protein gene 155

Gene model name correspondences to Glyma.17g259000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma17g37850 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.17g259000
>Glyma.17g259000.1 sequence-type=CDS polypeptide=Glyma.17g259000.1.p locus=Glyma.17g259000 id=Glyma.17g259000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGAATTTTGAGTACTATTGCAAGCTTTTTTGGATTTGGAGTGGGAACTTCAATTGGGCTAGTCATTGGCTACTATTTGTTCATATACTTCCAGCCAACAGATGTTAAGGATCCAGTAATTCAACCTTTGGTTGAGCAAGATGCTAAAACATTACAACTGTTGCTTCCAGAGATACCCACTTGGATTAAAAACCCAGACTATGACCGTCTCGACTGGCTTAATAAATTTATATTGTATATGTGGCCTTATCTGGACAAGGCAATTTGCAAGACTGCAAGGAGTATAGCAAAGCCCATTATTGCTGAGCAAATTCCGAAGTACAAAATTGATTCAGTTGAATTTGAAGAACTTAGCTTGGGTTCTCTGCCACCAACTTTTCAAGGAATGAAAGTCTATGTGACTGACGAAAAGGAGTTGATTATGGAACCATCAGTGAAGTGGGCTGGGAATCCTAACATTATAGTTGCAATTAAAGCATTTGGGCTTCGAGCCACAGTCCAGGTTGTTGATCTGCAAGTATTTGCTGCTCCGCGTATAACTCTGAAGCCTTTGGTTCCAAGTTTTCCATGTTTTGCCAATATTTACATGTCTCTCATGGAGAAGCCGCATGTTGATTTTGGACTAAAACTGCTTGGAGCTGATGCAATGTCTATTCCTGGCCTTTATAGGATTGTCCAGGAAATCATTAAAGACCAAGTCGCAAACATGTATCTGTGGCCAAAGGCCTTAGAGGTGCAAATAATGGATCCAACAAAGGCCATGAAAGTTCCAGTTGGAATCCTTCATGTGAAAGTTGTGAGGGCAGAGAAGCTTAAAAAGAAAGATCTACTGGGGGCGTCAGACCCTTATGTGAAACTCAAACTCACAGAAGAGAAACTTCCTTCAAAGAAAACAACTGTGAAATACAAGAATTTGAATCCGGAATGGAATGAGGAATTTAATGTAGTCGTCAAAGATCCAGAATCTCAAGTCTTGGAGCTTACAGTTTATGACTGGGAGCAGATTGGCAAGCATGACAAGATGGGTATGAATGTCATTCCACTGAAAGAGATTACACCTGATGAACCTAAAGTGGTGACTCTTAATTTACTCAAGACCATGGACCCTAATGATCCTGAGAATGAGAAGTTGCGCGGGCAGCTAACTGTTGAAGTTCTGTACAAACCTTTTAAGGAGGATGAGTTACCTCAGAGTACAGAAGATTCCAATGCAATAGAAAAGGCTCCTGAAGGAACACCTGCTAGTGGTGGTTTACTTGTAATTATCGTCCATGAAGCTGAAGATGTGGAAGGAAAACACCACACAAATCCATATGTGCGACTGCTATTTAAGGGAGAAGAGAGAAAAACCAAGCATGTCAAGAAAAATAGAGATCCAAGATGGGGTGAGTCGTTTCAATTTATGCTTGAGGAACCGCCAACCAATGAGAGACTATATGTTGAAGTGCAAAGTGCCTCCTCAAAGCTAGGCCTGCTGCATCCTAAGGAAAGTCTGGGTTACGTGGATATAAAATTGTCTGACGTTGTTACCAACAAAAGAATCAACGAGAAATATCATCTCATTGACTCAAGAAATGGACGAATTCAAATTGAGCTTCAGTGGAGAACTCCTTGA
Predicted protein sequences of Glyma.17g259000
>Glyma.17g259000.1.p sequence-type=predicted peptide transcript=Glyma.17g259000.1 locus=Glyma.17g259000 id=Glyma.17g259000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGILSTIASFFGFGVGTSIGLVIGYYLFIYFQPTDVKDPVIQPLVEQDAKTLQLLLPEIPTWIKNPDYDRLDWLNKFILYMWPYLDKAICKTARSIAKPIIAEQIPKYKIDSVEFEELSLGSLPPTFQGMKVYVTDEKELIMEPSVKWAGNPNIIVAIKAFGLRATVQVVDLQVFAAPRITLKPLVPSFPCFANIYMSLMEKPHVDFGLKLLGADAMSIPGLYRIVQEIIKDQVANMYLWPKALEVQIMDPTKAMKVPVGILHVKVVRAEKLKKKDLLGASDPYVKLKLTEEKLPSKKTTVKYKNLNPEWNEEFNVVVKDPESQVLELTVYDWEQIGKHDKMGMNVIPLKEITPDEPKVVTLNLLKTMDPNDPENEKLRGQLTVEVLYKPFKEDELPQSTEDSNAIEKAPEGTPASGGLLVIIVHEAEDVEGKHHTNPYVRLLFKGEERKTKHVKKNRDPRWGESFQFMLEEPPTNERLYVEVQSASSKLGLLHPKESLGYVDIKLSDVVTNKRINEKYHLIDSRNGRIQIELQWRTP*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo