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A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT4G24190.1 | AT | Chaperone protein htpG family protein | JGI | N/A | IEA |
GO:0006457 | GO-bp | protein folding | EnsemblGenomes | N/A | IEA |
GO:0006457 | GO-bp | protein folding | JGI | N/A | IEA |
GO:0006950 | GO-bp | response to stress | EnsemblGenomes | N/A | IEA |
GO:0006950 | GO-bp | response to stress | JGI | N/A | IEA |
GO:0016311 | GO-bp | dephosphorylation | EnsemblGenomes | N/A | IEA |
GO:0005737 | GO-cc | cytoplasm | EnsemblGenomes | N/A | IEA |
GO:0000287 | GO-mf | magnesium ion binding | EnsemblGenomes | N/A | IEA |
GO:0005524 | GO-mf | ATP binding | EnsemblGenomes | N/A | IEA |
GO:0005524 | GO-mf | ATP binding | JGI | N/A | IEA |
GO:0008253 | GO-mf | 5'-nucleotidase activity | EnsemblGenomes | N/A | IEA |
GO:0051082 | GO-mf | unfolded protein binding | EnsemblGenomes | N/A | IEA |
GO:0051082 | GO-mf | unfolded protein binding | JGI | N/A | IEA |
KOG0020 | KOG | Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family | JGI | N/A | IEA |
PTHR11528 | Panther | HEAT SHOCK PROTEIN 90 | JGI | N/A | IEA |
PTHR11528:SF36 | Panther | JGI | N/A | IEA | |
PF00183 | PFAM | Hsp90 protein | JGI | N/A | IEA |
PF02518 | PFAM | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | JGI | N/A | IEA |
Glyma.17g258700 not represented in the dataset |
Glyma.17g258700 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Paralog | Evidence | Comments |
---|---|---|
Glyma.14g219700 | IGC | Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35. |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma17g37820 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.17g258700.2 sequence-type=transcript locus=Glyma.17g258700 ID=Glyma.17g258700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATCCAAACTAAACGGATCTCTTCTTCAGTGGTGGAAGCTACTAGAACACTAGTTTGTTGAGCACTGCGATGAGGAAGTGGACGGTTGcttccgctctccttcttctctctctcctctttctcttTGCAGATCAAGGTCGAAAGTTTCAGGCGAATGCCGAGGGAGATTCCGACGAGCTTGTAGATCCTCCGAAGGTGGAGGACAAGATCGGTGCTGTGCCTCATGGCCTTTCCACCGATTCAGATGTCGTCAAGAGGGAGTCGGAGTCGATCTCGAAGAGATCTCTCCGGAGCAATGCGGAGAAGTTTGAGTTCCAAGCGGAAGTGTCACGGCTTATGGATATTATCATCAATTCTCTCTACAGTAACAAGGATATCTTCCTCAGAGAGTTGATTTCCAATGCTTCTGATGCTTTGGACAAGATTAGGTTCCTTTCCCTCACGGATAAGGACGTTTTGGGAGAAGGTGATAACACCAAGCTTGATATTCAGATTAAGTTGGACAAGGAAAAGAAAATTCTCTCAATTCGAGACAGAGGTATTGGTATGACGAAGGAGGATTTGATAAAGAATTTGGGGACAATAGCAAAATCTGGAACTTCTGCATTTGTTGAGAAGATGCAAACAAGTGGAGATCTCAATCTGATTGGGCAGTTTGGAGTCGGCTTCTACTCTGTTTATCTCGTGGCTGACTATGTCGAAGTCATTAGCAAGAATAATGATGATAAACAGTATGTATGGGAATCAAAAGCTGATGGAGCATTTGCAATTTCAGAAGATACATGGAATGAACCTCTAGGGCGTGGAACTGAGATTAGATTACACCTCAAGGAAGAGGCTGGGGAGTACTTGCAGGAGTCTAAACTGAAAGAATTGGTGAAGAGATACTCTGAATTTATTAACTTCCCTATCTATATTTGGGCAAGCAAAGAGGTTGATGTGGAGGTTCCCGCTGATGAAGATGATTCCAGTGATGAAGAGGATTCATCTGAAAGCAGCTCCAAGGAGGAaagcgaagatgaagatgctgataaaagtgaagacgaagaaaaaaagcccaagacaaagacgGTGAAGGAAACAACTTATGAATGGGAACTTTTAAATGATGTGAAAGCTATATGGCTGAGGAATCCAAAGGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAGGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGCGATGTCGAGTTCAAGGCAGTCCTGTTTGTACCACCTAAGGCACCTCAAGATTTATACGAGAGCTATTATAACGCAAACAAATCCAACCTGAAGTTGTATGTTAGACGTGTGTTCATTTCAGATGAATTTAATGAACTGTTGCCTAAGTACCTAAACTTTTTGCTGGGTCTTGTTGATTCTGACACATTGCCACTTAATGTATCGCGAGAAATGCTTCAGCAACATAGTAGTCTAAAGACAATCAAGAAGAAACTTATTAGGAAAGCCCTTGATATGATCCGTAGGATTGCTGATGAGGATCCTGATGAGTCCACTGACAAAGAAAAGAAAGATACGTCATCTGACAATAATGAGAAGAAAGGTCAATATTCCAAGTTCTGGAATGAGTTTGGTAAATCCATTAAACTTGGTATCATCGAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAGCACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAATGAAAGCTGGGCAGAAGGATATCTTTTACATAACTGGAACCAGCAAAGAACAACTGGAAAACTCTCCATTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGGTTATTTTCTTCACGGATCCAGTTGATGAATACTTGATGCAATACCTGATGGATTATGAAGACAAGAAGTTCCAAAATGTGTCCAAGGAGGGTTTGAAACTCGGGAAAGATTCAAAAGACAAGGAACTGAAGGAATCCTTCAAGGACCTTACCAAGTGGTGGAAAACTGCTCTTTCCAAAGACAATGTTGATGATGTGAAGATTTCCAACCGATTGGACAACACTCCTTGTGTAGTGGTAACATCAAAATTTGGTTGGAGTGCTAACATGGAGAGAATCATGCAGTCTCAAACTTTGTCTGATGCTAGCAAGCAAGCATACATGCGCGGCAAGAGGGTTCTTGAGGTCAATCCTAGGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGGATGAGGGTGTGAAACATACAGCACAGTTGATGTACCAGACCGCACTCTTCGAAAGTGGCTTCCTGCTTGATGATCCCAAGGATTTTGCTTCCCGTATTTATGATTCAGTTAAGACCAGCTTGGACATCAGTCCTGAAGCAACAGTTGAGGAGGAAGATGACACCGAAGTAGAGGCTGAAAGTGATTCAAAGCctgaagctgatgcggttcatgatggtgatgttgatgatgCCAAGGACGAGTTGTAGATTTGCATGACATCCACTATTTAATGACGGTGCTGTCGGTTCCCTTTGTTTTTCATGGTTTCAGCTTTAAGATAGACCGTAAAAGCCTTCTCTAGCATGAGTTTTTTATTTCACAAGTTGTTAAAGGAGAACATTAGTCTTACTGTAATCATACTATCCCTTGGAATTTTGCCGTACCATATCAGTCTTAACACAATGTTCAAGTTCCTAGAAAATATGCTTGTCTTTTTTATATTTTATTTTTAGCAGCAGTGCAGCGCCCCTTAATTGAAATCATGAATGTCCTCCTGGTAATGGGTTTATAAATAATTGCCCACTCCTAGAATGAGTAAAGGCCGAAATAAACTCTTGAATTTCAACAGGATAGCTTTTAC
>Glyma.17g258700.1 sequence-type=CDS polypeptide=Glyma.17g258700.1.p locus=Glyma.17g258700 ID=Glyma.17g258700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGAGGAAGTGGACGGTTGCTTCCGCTCTCCTTCTTCTCTCTCTCCTCTTTCTCTTTGCAGATCAAGGTCGAAAGTTTCAGGCGAATGCCGAGGGAGATTCCGACGAGCTTGTAGATCCTCCGAAGGTGGAGGACAAGATCGGTGCTGTGCCTCATGGCCTTTCCACCGATTCAGATGTCGTCAAGAGGGAGTCGGAGTCGATCTCGAAGAGATCTCTCCGGAGCAATGCGGAGAAGTTTGAGTTCCAAGCGGAAGTGTCACGGCTTATGGATATTATCATCAATTCTCTCTACAGTAACAAGGATATCTTCCTCAGAGAGTTGATTTCCAATGCTTCTGATGCTTTGGACAAGATTAGGTTCCTTTCCCTCACGGATAAGGACGTTTTGGGAGAAGGTGATAACACCAAGCTTGATATTCAGATTAAGTTGGACAAGGAAAAGAAAATTCTCTCAATTCGAGACAGAGGTATTGGTATGACGAAGGAGGATTTGATAAAGAATTTGGGGACAATAGCAAAATCTGGAACTTCTGCATTTGTTGAGAAGATGCAAACAAGTGGAGATCTCAATCTGATTGGGCAGTTTGGAGTCGGCTTCTACTCTGTTTATCTCGTGGCTGACTATGTCGAAGTCATTAGCAAGAATAATGATGATAAACAGTATGTATGGGAATCAAAAGCTGATGGAGCATTTGCAATTTCAGAAGATACATGGAATGAACCTCTAGGGCGTGGAACTGAGATTAGATTACACCTCAAGGAAGAGGCTGGGGAGTACTTGCAGGAGTCTAAACTGAAAGAATTGGTGAAGAGATACTCTGAATTTATTAACTTCCCTATCTATATTTGGGCAAGCAAAGAGGTTGATGTGGAGGTTCCCGCTGATGAAGATGATTCCAGTGATGAAGAGGATTCATCTGAAAGCAGCTCCAAGGAGGAAAGCGAAGATGAAGATGCTGATAAAAGTGAAGACGAAGAAAAAAAGCCCAAGACAAAGACGGTGAAGGAAACAACTTATGAATGGGAACTTTTAAATGATGTGAAAGCTATATGGCTGAGGAATCCAAAGGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAGGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGCGATGTCGAGTTCAAGGCAGTCCTGTTTGTACCACCTAAGGCACCTCAAGATTTATACGAGAGCTATTATAACGCAAACAAATCCAACCTGAAGTTGTATGTTAGACGTGTGTTCATTTCAGATGAATTTAATGAACTGTTGCCTAAGTACCTAAACTTTTTGCTGGGTCTTGTTGATTCTGACACATTGCCACTTAATGTATCGCGAGAAATGCTTCAGCAACATAGTAGTCTAAAGACAATCAAGAAGAAACTTATTAGGAAAGCCCTTGATATGATCCGTAGGATTGCTGATGAGGATCCTGATGAGTCCACTGACAAAGAAAAGAAAGAAGATACGTCATCTGACAATAATGAGAAGAAAGGTCAATATTCCAAGTTCTGGAATGAGTTTGGTAAATCCATTAAACTTGGTATCATCGAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAGCACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAATGAAAGCTGGGCAGAAGGATATCTTTTACATAACTGGAACCAGCAAAGAACAACTGGAAAACTCTCCATTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGGTTATTTTCTTCACGGATCCAGTTGATGAATACTTGATGCAATACCTGATGGATTATGAAGACAAGAAGTTCCAAAATGTGTCCAAGGAGGGTTTGAAACTCGGGAAAGATTCAAAAGACAAGGAACTGAAGGAATCCTTCAAGGACCTTACCAAGTGGTGGAAAACTGCTCTTTCCAAAGACAATGTTGATGATGTGAAGATTTCCAACCGATTGGACAACACTCCTTGTGTAGTGGTAACATCAAAATTTGGTTGGAGTGCTAACATGGAGAGAATCATGCAGTCTCAAACTTTGTCTGATGCTAGCAAGCAAGCATACATGCGCGGCAAGAGGGTTCTTGAGGTCAATCCTAGGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGGATGAGGGTGTGAAACATACAGCACAGTTGATGTACCAGACCGCACTCTTCGAAAGTGGCTTCCTGCTTGATGATCCCAAGGATTTTGCTTCCCGTATTTATGATTCAGTTAAGACCAGCTTGGACATCAGTCCTGAAGCAACAGTTGAGGAGGAAGATGACACCGAAGTAGAGGCTGAAAGTGATTCAAAGCCTGAAGCTGATGCGGTTCATGATGGTGATGTTGATGATGCCAAGGACGAGTTGTAG >Glyma.17g258700.2 sequence-type=CDS polypeptide=Glyma.17g258700.2.p locus=Glyma.17g258700 ID=Glyma.17g258700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGAGGAAGTGGACGGTTGCTTCCGCTCTCCTTCTTCTCTCTCTCCTCTTTCTCTTTGCAGATCAAGGTCGAAAGTTTCAGGCGAATGCCGAGGGAGATTCCGACGAGCTTGTAGATCCTCCGAAGGTGGAGGACAAGATCGGTGCTGTGCCTCATGGCCTTTCCACCGATTCAGATGTCGTCAAGAGGGAGTCGGAGTCGATCTCGAAGAGATCTCTCCGGAGCAATGCGGAGAAGTTTGAGTTCCAAGCGGAAGTGTCACGGCTTATGGATATTATCATCAATTCTCTCTACAGTAACAAGGATATCTTCCTCAGAGAGTTGATTTCCAATGCTTCTGATGCTTTGGACAAGATTAGGTTCCTTTCCCTCACGGATAAGGACGTTTTGGGAGAAGGTGATAACACCAAGCTTGATATTCAGATTAAGTTGGACAAGGAAAAGAAAATTCTCTCAATTCGAGACAGAGGTATTGGTATGACGAAGGAGGATTTGATAAAGAATTTGGGGACAATAGCAAAATCTGGAACTTCTGCATTTGTTGAGAAGATGCAAACAAGTGGAGATCTCAATCTGATTGGGCAGTTTGGAGTCGGCTTCTACTCTGTTTATCTCGTGGCTGACTATGTCGAAGTCATTAGCAAGAATAATGATGATAAACAGTATGTATGGGAATCAAAAGCTGATGGAGCATTTGCAATTTCAGAAGATACATGGAATGAACCTCTAGGGCGTGGAACTGAGATTAGATTACACCTCAAGGAAGAGGCTGGGGAGTACTTGCAGGAGTCTAAACTGAAAGAATTGGTGAAGAGATACTCTGAATTTATTAACTTCCCTATCTATATTTGGGCAAGCAAAGAGGTTGATGTGGAGGTTCCCGCTGATGAAGATGATTCCAGTGATGAAGAGGATTCATCTGAAAGCAGCTCCAAGGAGGAAAGCGAAGATGAAGATGCTGATAAAAGTGAAGACGAAGAAAAAAAGCCCAAGACAAAGACGGTGAAGGAAACAACTTATGAATGGGAACTTTTAAATGATGTGAAAGCTATATGGCTGAGGAATCCAAAGGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAGGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGCGATGTCGAGTTCAAGGCAGTCCTGTTTGTACCACCTAAGGCACCTCAAGATTTATACGAGAGCTATTATAACGCAAACAAATCCAACCTGAAGTTGTATGTTAGACGTGTGTTCATTTCAGATGAATTTAATGAACTGTTGCCTAAGTACCTAAACTTTTTGCTGGGTCTTGTTGATTCTGACACATTGCCACTTAATGTATCGCGAGAAATGCTTCAGCAACATAGTAGTCTAAAGACAATCAAGAAGAAACTTATTAGGAAAGCCCTTGATATGATCCGTAGGATTGCTGATGAGGATCCTGATGAGTCCACTGACAAAGAAAAGAAAGATACGTCATCTGACAATAATGAGAAGAAAGGTCAATATTCCAAGTTCTGGAATGAGTTTGGTAAATCCATTAAACTTGGTATCATCGAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAGCACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAATGAAAGCTGGGCAGAAGGATATCTTTTACATAACTGGAACCAGCAAAGAACAACTGGAAAACTCTCCATTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGGTTATTTTCTTCACGGATCCAGTTGATGAATACTTGATGCAATACCTGATGGATTATGAAGACAAGAAGTTCCAAAATGTGTCCAAGGAGGGTTTGAAACTCGGGAAAGATTCAAAAGACAAGGAACTGAAGGAATCCTTCAAGGACCTTACCAAGTGGTGGAAAACTGCTCTTTCCAAAGACAATGTTGATGATGTGAAGATTTCCAACCGATTGGACAACACTCCTTGTGTAGTGGTAACATCAAAATTTGGTTGGAGTGCTAACATGGAGAGAATCATGCAGTCTCAAACTTTGTCTGATGCTAGCAAGCAAGCATACATGCGCGGCAAGAGGGTTCTTGAGGTCAATCCTAGGCACCCTATTATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAACCCTGAGGATGAGGGTGTGAAACATACAGCACAGTTGATGTACCAGACCGCACTCTTCGAAAGTGGCTTCCTGCTTGATGATCCCAAGGATTTTGCTTCCCGTATTTATGATTCAGTTAAGACCAGCTTGGACATCAGTCCTGAAGCAACAGTTGAGGAGGAAGATGACACCGAAGTAGAGGCTGAAAGTGATTCAAAGCCTGAAGCTGATGCGGTTCATGATGGTGATGTTGATGATGCCAAGGACGAGTTGTAG
>Glyma.17g258700.1.p sequence-type=predicted peptide transcript=Glyma.17g258700.1 locus=Glyma.17g258700 ID=Glyma.17g258700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MRKWTVASALLLLSLLFLFADQGRKFQANAEGDSDELVDPPKVEDKIGAVPHGLSTDSDVVKRESESISKRSLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKDVLGEGDNTKLDIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKNNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLKEEAGEYLQESKLKELVKRYSEFINFPIYIWASKEVDVEVPADEDDSSDEEDSSESSSKEESEDEDADKSEDEEKKPKTKTVKETTYEWELLNDVKAIWLRNPKEVTEEEYTKFYHSLAKDFSDEKPLAWSHFTAEGDVEFKAVLFVPPKAPQDLYESYYNANKSNLKLYVRRVFISDEFNELLPKYLNFLLGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRRIADEDPDESTDKEKKEDTSSDNNEKKGQYSKFWNEFGKSIKLGIIEDATNRNRLAKLLRFESTKSEGKLTSLDQYISRMKAGQKDIFYITGTSKEQLENSPFLERLKKKNFEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSKDKELKESFKDLTKWWKTALSKDNVDDVKISNRLDNTPCVVVTSKFGWSANMERIMQSQTLSDASKQAYMRGKRVLEVNPRHPIIKELRERVVKNPEDEGVKHTAQLMYQTALFESGFLLDDPKDFASRIYDSVKTSLDISPEATVEEEDDTEVEAESDSKPEADAVHDGDVDDAKDEL* >Glyma.17g258700.2.p sequence-type=predicted peptide transcript=Glyma.17g258700.2 locus=Glyma.17g258700 ID=Glyma.17g258700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 MRKWTVASALLLLSLLFLFADQGRKFQANAEGDSDELVDPPKVEDKIGAVPHGLSTDSDVVKRESESISKRSLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKDVLGEGDNTKLDIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKNNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLKEEAGEYLQESKLKELVKRYSEFINFPIYIWASKEVDVEVPADEDDSSDEEDSSESSSKEESEDEDADKSEDEEKKPKTKTVKETTYEWELLNDVKAIWLRNPKEVTEEEYTKFYHSLAKDFSDEKPLAWSHFTAEGDVEFKAVLFVPPKAPQDLYESYYNANKSNLKLYVRRVFISDEFNELLPKYLNFLLGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRRIADEDPDESTDKEKKDTSSDNNEKKGQYSKFWNEFGKSIKLGIIEDATNRNRLAKLLRFESTKSEGKLTSLDQYISRMKAGQKDIFYITGTSKEQLENSPFLERLKKKNFEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSKDKELKESFKDLTKWWKTALSKDNVDDVKISNRLDNTPCVVVTSKFGWSANMERIMQSQTLSDASKQAYMRGKRVLEVNPRHPIIKELRERVVKNPEDEGVKHTAQLMYQTALFESGFLLDDPKDFASRIYDSVKTSLDISPEATVEEEDDTEVEAESDSKPEADAVHDGDVDDAKDEL*
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