Glyma.17g253900

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Report for Sequence Feature Glyma.17g253900

Feature Type:	gene_model
Chromosome:	Gm17
Start:	40774876
stop:	40782121
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.17g253900

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G57960.1	AT	GTP-binding protein, HflX	JGI	N/A	IEA
GO:0015684	GO-bp	ferrous iron transport	JGI	N/A	IEA
GO:0005737	GO-cc	cytoplasm	EnsemblGenomes	N/A	IEA
GO:0016021	GO-cc	integral component of membrane	JGI	N/A	IEA
GO:0003924	GO-mf	GTPase activity	JGI	N/A	IEA
GO:0005525	GO-mf	GTP binding	EnsemblGenomes	N/A	IEA
GO:0005525	GO-mf	GTP binding	JGI	N/A	IEA
GO:0015093	GO-mf	ferrous iron transmembrane transporter activity	JGI	N/A	IEA
GO:0043022	GO-mf	ribosome binding	EnsemblGenomes	N/A	IEA
KOG0410	KOG	Predicted GTP binding protein	JGI	N/A	IEA
PTHR10229	Panther	GTP-BINDING PROTEIN HFLX	JGI	N/A	IEA
PF01926	PFAM	50S ribosome-binding GTPase	JGI	N/A	IEA

Expression Patterns of Glyma.17g253900

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.17g253900 not represented in the dataset	Glyma.17g253900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.17g253900 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma17g37250	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.17g253900

Limit To All Plant Sequences

>Glyma.17g253900.2 sequence-type=transcript locus=Glyma.17g253900 ID=Glyma.17g253900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTTGGCAGCATAATAGTAATAATAAGTTACTAATAACTAAAAAAAGCGAACGCAATCCATCATTGGAATACATAGAAAAAGAGAAGAGCTTATGGTGGAAGGTTGAAGAAAGAGATGAGTGGAACTGGAACATTCTTCTACGGTTCGGTAATTCAGCCGTTGATTCGCTACCATTATCTATCACCACCAATCCCTATTCGTCCCTTATGCTGCATATCCCCTCTCATCACCTCCATTCACTCCAACGACGCCGTTTCTCCGCAAAACGGAACGCTTCGCTTCCAGACAGAGCATCAGCAGCACAGCGAAGAACCGCTTCCCGTTCCGTCACTCTCTGCCGCCGAAGAAAACAAAGCAACAACGAAGCTTCGAAAGAAGAAAGAAGACGACGTCGTTTCCGATAACCGCTTCAAGCTCCGCAACGGAAGAGAGGTTTTTGAAGAAAAAGCGTACCTCGTAGGCGTTGAGCGCAAGAACGATGTTCAGGATTTCGGCATCGAAGAGTCTCTGAGCGAATTGTCGCAGTTAGTTGACACTGCTGGATTATTGGTTGTTGGCTCTACTTACCAGAAGCTTACTTCTCCAAATCCTAGGACGTACATTGGCTCTGGCAAGGTTTCTGAAATTAAGAGTGCAATTCATGCATTGGGCGTTGAAACTGTTATCTTTGATGATGAGCTGTCAGCTGGGCAATTGCGCAACTTGGAGAAGATTTTTGGTGGAGATGTGAGAGTTTGTGATCGAACTGCTCTCATCCTTGATATATTTAATCAACGAGCAGCAACACATGAAGCGTCTTTACAGGTTTCATTAGCACAAATGGAATACCAACTACCTCGTCTAACAAAAATGTGGACTCATCTTGAGCGTCAAGCAGGAGGAAAGGTGAAGGGAATGGGTGAAAAACAAATAGAAGTGGACAAACGTATTCTGCGCAACCAAATTGGTATTCTTAAAAAAGAGCTAGAATCTGTTAGGAAACATCGAAAGCAGTACCGTAACAGGCGTTTCTCAGTACCTGTGGCAGTTGTATCCTTGGTGGGTTACACAAATGCTGGTAAGAGTACACTTTTGAATCAACTAACAGGAGCAGATGTTCTTGCCGAGGATAAATTATTTGCAACTTTAGATCCTACTACGAGGAGGGTACAGATGAAGAATGGAAAGGAGTTTCTCCTAACAGACACTGTTGGTTTTATTCAGAAGTTACCTACTACACTAGTTGCTGCCTTCAGAGCTACACTGGAGGAGATATCGGAGTCATCGCTCTTGGTGCATGTGGTTGATATAAGTCACCCGCTGGCTGAGCAACAGATAAATGCTGTGGACAAAGTCCTGTCAGAACTAGATGTATCGTCAATTCCAAAATTGATTGTCTGGAACAAGCAATGAAATTCTTCTCTTAAAATTGGCACAAGTATGCTTTTTAAGAGGACTG

>Glyma.17g253900.3 sequence-type=transcript locus=Glyma.17g253900 ID=Glyma.17g253900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTTGGCAGCATAATAGTAATAATAAGTTACTAATAACTAAAAAAAGCGAACGCAATCCATCATTGGAATACATAGAAAAAGAGAAGAGCTTATGGTGGAAGGTTGAAGAAAGAGATGAGTGGAACTGGAACATTCTTCTACGGTTCGGTAATTCAGCCGTTGATTCGCTACCATTATCTATCACCACCAATCCCTATTCGTCCCTTATGCTGCATATCCCCTCTCATCACCTCCATTCACTCCAACGACGCCGTTTCTCCGCAAAACGGAACGCTTCGCTTCCAGACAGAGCATCAGCAGCACAGCGAAGAACCGCTTCCCGTTCCGTCACTCTCTGCCGCCGAAGAAAACAAAGCAACAACGAAGCTTCGAAAGAAGAAAGAAGACGACGTCGTTTCCGATAACCGCTTCAAGCTCCGCAACGGAAGAGAGGTTTTTGAAGAAAAAGCGTACCTCGTAGGCGTTGAGCGCAAGAACGATGTTCAGGATTTCGGCATCGAAGAGTCTCTGAGCGAATTGTCGCAGTTAGTTGACACTGCTGGATTATTGGTTGTTGGCTCTACTTACCAGAAGCTTACTTCTCCAAATCCTAGGACGTACATTGGCTCTGGCAAGGTTTCTGAAATTAAGAGTGCAATTCATGCATTGGGCGTTGAAACTGTTATCTTTGATGATGAGCTGTCAGCTGGGCAATTGCGCAACTTGGAGAAGATTTTTGGTGGAGATGTGAGAGTTTGTGATCGAACTGCTCTCATCCTTGATATATTTAATCAACGAGCAGCAACACATGAAGCGTCTTTACAGGTTTCATTAGCACAAATGGAATACCAACTACCTCGTCTAACAAAAATGTGGACTCATCTTGAGCGTCAAGCAGGAGGAAAGGTGAAGGGAATGGGTGAAAAACAAATAGAAGTGGACAAACGTATTCTGCGCAACCAAATTGGTATTCTTAAAAAAGAGCTAGAATCTGTTAGGAAACATCGAAAGCAGTACCGTAACAGGCGTTTCTCAGTACCTGTGGCAGTTGTATCCTTGGTGGGTTACACAAATGCTGGTAAGAGTACACTTTTGAATCAACTAACAGGAGCAGATGTTCTTGCCGAGGATAAATTATTTGCAACTTTAGATCCTACTACGAGGAGGGTACAGATGAAGAATGGAAAGGAGTTTCTCCTAACAGACACTGTTGGTTTTATTCAGAAGTTACCTACTACACTAGTTGCTGCCTTCAGAGCTACACTGGAGGAGATATCGGAGTCATCGCTCTTGGTGCATGTGGTTGATATAAGTCACCCGCTGGCTGAGCAACAGATAAATGCTGTGGACAAAGTCCTGTCAGAACTAGATGTATCGTCAATTCCAAAATTGATTGTCTGGAACAAGCATTGATATCCTGTCATTTAAATTAGCATCATCAGATACTGGGATCAATGAAATTCTTCTCTTAAAATTGGCACAAGTATGCTTTTTAAGAGGACTG

Coding sequences of Glyma.17g253900

Limit To All Plant Sequences

>Glyma.17g253900.1 sequence-type=CDS polypeptide=Glyma.17g253900.1.p locus=Glyma.17g253900 ID=Glyma.17g253900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGTGGAACTGGAACATTCTTCTACGGTTCGGTAATTCAGCCGTTGATTCGCTACCATTATCTATCACCACCAATCCCTATTCGTCCCTTATGCTGCATATCCCCTCTCATCACCTCCATTCACTCCAACGACGCCGTTTCTCCGCAAAACGGAACGCTTCGCTTCCAGACAGAGCATCAGCAGCACAGCGAAGAACCGCTTCCCGTTCCGTCACTCTCTGCCGCCGAAGAAAACAAAGCAACAACGAAGCTTCGAAAGAAGAAAGAAGACGACGTCGTTTCCGATAACCGCTTCAAGCTCCGCAACGGAAGAGAGGTTTTTGAAGAAAAAGCGTACCTCGTAGGCGTTGAGCGCAAGAACGATGTTCAGGATTTCGGCATCGAAGAGTCTCTGAGCGAATTGTCGCAGTTAGTTGACACTGCTGGATTATTGGTTGTTGGCTCTACTTACCAGAAGCTTACTTCTCCAAATCCTAGGACGTACATTGGCTCTGGCAAGGTTTCTGAAATTAAGAGTGCAATTCATGCATTGGGCGTTGAAACTGTTATCTTTGATGATGAGCTGTCAGCTGGGCAATTGCGCAACTTGGAGAAGATTTTTGGTGGAGATGTGAGAGTTTGTGATCGAACTGCTCTCATCCTTGATATATTTAATCAACGAGCAGCAACACATGAAGCGTCTTTACAGGTTTCATTAGCACAAATGGAATACCAACTACCTCGTCTAACAAAAATGTGGACTCATCTTGAGCGTCAAGCAGGAGGAAAGGTGAAGGGAATGGGTGAAAAACAAATAGAAGTGGACAAACGTATTCTGCGCAACCAAATTGGTATTCTTAAAAAAGAGCTAGAATCTGTTAGGAAACATCGAAAGCAGTACCGTAACAGGCGTTTCTCAGTACCTGTGGCAGTTGTATCCTTGGTGGGTTACACAAATGCTGGTAAGAGTACACTTTTGAATCAACTAACAGGAGCAGATGTTCTTGCCGAGGATAAATTATTTGCAACTTTAGATCCTACTACGAGGAGGGTACAGATGAAGAATGGAAAGGAGTTTCTCCTAACAGACACTGTTGGTTTTATTCAGAAGTTACCTACTACACTAGTTGCTGCCTTCAGAGCTACACTGGAGGAGATATCGGAGTCATCGCTCTTGGTGCATGTGGTTGATATAAGTCACCCGCTGGCTGAGCAACAGATAAATGCTGTGGACAAAGTCCTGTCAGAACTAGATGTATCGTCAATTCCAAAATTGATTGTCTGGAACAAGGTTGACAAAGTTGGTGATCCCCAGAAACTCAGGCTAGAAGCTGAAAAAAGAGATGATGTTGTATGCATATCTGCTTTAAGTGGTAATGGCTTGCAAGAATTTTGTAATGCAGTTCAAGACAAGCTAAAGGACTCCATGGTTTGGGTGGAAGCTCTGGTCCCATTTGAAAATGGGGACCTTCTCAGCACCATACACCAGGTTGGAATGGTTGAGAAAACTGAATATACAGAGCAAGGGACATATATCAAGGCACATGTGCCCCTGCGTTTTGCAAGAATGCTTACACCCATGAGGCAACTGTGCGTATCGCAACCTTAA

>Glyma.17g253900.2 sequence-type=CDS polypeptide=Glyma.17g253900.2.p locus=Glyma.17g253900 ID=Glyma.17g253900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGTGGAACTGGAACATTCTTCTACGGTTCGGTAATTCAGCCGTTGATTCGCTACCATTATCTATCACCACCAATCCCTATTCGTCCCTTATGCTGCATATCCCCTCTCATCACCTCCATTCACTCCAACGACGCCGTTTCTCCGCAAAACGGAACGCTTCGCTTCCAGACAGAGCATCAGCAGCACAGCGAAGAACCGCTTCCCGTTCCGTCACTCTCTGCCGCCGAAGAAAACAAAGCAACAACGAAGCTTCGAAAGAAGAAAGAAGACGACGTCGTTTCCGATAACCGCTTCAAGCTCCGCAACGGAAGAGAGGTTTTTGAAGAAAAAGCGTACCTCGTAGGCGTTGAGCGCAAGAACGATGTTCAGGATTTCGGCATCGAAGAGTCTCTGAGCGAATTGTCGCAGTTAGTTGACACTGCTGGATTATTGGTTGTTGGCTCTACTTACCAGAAGCTTACTTCTCCAAATCCTAGGACGTACATTGGCTCTGGCAAGGTTTCTGAAATTAAGAGTGCAATTCATGCATTGGGCGTTGAAACTGTTATCTTTGATGATGAGCTGTCAGCTGGGCAATTGCGCAACTTGGAGAAGATTTTTGGTGGAGATGTGAGAGTTTGTGATCGAACTGCTCTCATCCTTGATATATTTAATCAACGAGCAGCAACACATGAAGCGTCTTTACAGGTTTCATTAGCACAAATGGAATACCAACTACCTCGTCTAACAAAAATGTGGACTCATCTTGAGCGTCAAGCAGGAGGAAAGGTGAAGGGAATGGGTGAAAAACAAATAGAAGTGGACAAACGTATTCTGCGCAACCAAATTGGTATTCTTAAAAAAGAGCTAGAATCTGTTAGGAAACATCGAAAGCAGTACCGTAACAGGCGTTTCTCAGTACCTGTGGCAGTTGTATCCTTGGTGGGTTACACAAATGCTGGTAAGAGTACACTTTTGAATCAACTAACAGGAGCAGATGTTCTTGCCGAGGATAAATTATTTGCAACTTTAGATCCTACTACGAGGAGGGTACAGATGAAGAATGGAAAGGAGTTTCTCCTAACAGACACTGTTGGTTTTATTCAGAAGTTACCTACTACACTAGTTGCTGCCTTCAGAGCTACACTGGAGGAGATATCGGAGTCATCGCTCTTGGTGCATGTGGTTGATATAAGTCACCCGCTGGCTGAGCAACAGATAAATGCTGTGGACAAAGTCCTGTCAGAACTAGATGTATCGTCAATTCCAAAATTGATTGTCTGGAACAAGCAATGA

>Glyma.17g253900.3 sequence-type=CDS polypeptide=Glyma.17g253900.3.p locus=Glyma.17g253900 ID=Glyma.17g253900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGTGGAACTGGAACATTCTTCTACGGTTCGGTAATTCAGCCGTTGATTCGCTACCATTATCTATCACCACCAATCCCTATTCGTCCCTTATGCTGCATATCCCCTCTCATCACCTCCATTCACTCCAACGACGCCGTTTCTCCGCAAAACGGAACGCTTCGCTTCCAGACAGAGCATCAGCAGCACAGCGAAGAACCGCTTCCCGTTCCGTCACTCTCTGCCGCCGAAGAAAACAAAGCAACAACGAAGCTTCGAAAGAAGAAAGAAGACGACGTCGTTTCCGATAACCGCTTCAAGCTCCGCAACGGAAGAGAGGTTTTTGAAGAAAAAGCGTACCTCGTAGGCGTTGAGCGCAAGAACGATGTTCAGGATTTCGGCATCGAAGAGTCTCTGAGCGAATTGTCGCAGTTAGTTGACACTGCTGGATTATTGGTTGTTGGCTCTACTTACCAGAAGCTTACTTCTCCAAATCCTAGGACGTACATTGGCTCTGGCAAGGTTTCTGAAATTAAGAGTGCAATTCATGCATTGGGCGTTGAAACTGTTATCTTTGATGATGAGCTGTCAGCTGGGCAATTGCGCAACTTGGAGAAGATTTTTGGTGGAGATGTGAGAGTTTGTGATCGAACTGCTCTCATCCTTGATATATTTAATCAACGAGCAGCAACACATGAAGCGTCTTTACAGGTTTCATTAGCACAAATGGAATACCAACTACCTCGTCTAACAAAAATGTGGACTCATCTTGAGCGTCAAGCAGGAGGAAAGGTGAAGGGAATGGGTGAAAAACAAATAGAAGTGGACAAACGTATTCTGCGCAACCAAATTGGTATTCTTAAAAAAGAGCTAGAATCTGTTAGGAAACATCGAAAGCAGTACCGTAACAGGCGTTTCTCAGTACCTGTGGCAGTTGTATCCTTGGTGGGTTACACAAATGCTGGTAAGAGTACACTTTTGAATCAACTAACAGGAGCAGATGTTCTTGCCGAGGATAAATTATTTGCAACTTTAGATCCTACTACGAGGAGGGTACAGATGAAGAATGGAAAGGAGTTTCTCCTAACAGACACTGTTGGTTTTATTCAGAAGTTACCTACTACACTAGTTGCTGCCTTCAGAGCTACACTGGAGGAGATATCGGAGTCATCGCTCTTGGTGCATGTGGTTGATATAAGTCACCCGCTGGCTGAGCAACAGATAAATGCTGTGGACAAAGTCCTGTCAGAACTAGATGTATCGTCAATTCCAAAATTGATTGTCTGGAACAAGCATTGA

Predicted protein sequences of Glyma.17g253900

Limit To All Plant Sequences

>Glyma.17g253900.1.p sequence-type=predicted peptide transcript=Glyma.17g253900.1 locus=Glyma.17g253900 ID=Glyma.17g253900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSGTGTFFYGSVIQPLIRYHYLSPPIPIRPLCCISPLITSIHSNDAVSPQNGTLRFQTEHQQHSEEPLPVPSLSAAEENKATTKLRKKKEDDVVSDNRFKLRNGREVFEEKAYLVGVERKNDVQDFGIEESLSELSQLVDTAGLLVVGSTYQKLTSPNPRTYIGSGKVSEIKSAIHALGVETVIFDDELSAGQLRNLEKIFGGDVRVCDRTALILDIFNQRAATHEASLQVSLAQMEYQLPRLTKMWTHLERQAGGKVKGMGEKQIEVDKRILRNQIGILKKELESVRKHRKQYRNRRFSVPVAVVSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQINAVDKVLSELDVSSIPKLIVWNKVDKVGDPQKLRLEAEKRDDVVCISALSGNGLQEFCNAVQDKLKDSMVWVEALVPFENGDLLSTIHQVGMVEKTEYTEQGTYIKAHVPLRFARMLTPMRQLCVSQP*

>Glyma.17g253900.2.p sequence-type=predicted peptide transcript=Glyma.17g253900.2 locus=Glyma.17g253900 ID=Glyma.17g253900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSGTGTFFYGSVIQPLIRYHYLSPPIPIRPLCCISPLITSIHSNDAVSPQNGTLRFQTEHQQHSEEPLPVPSLSAAEENKATTKLRKKKEDDVVSDNRFKLRNGREVFEEKAYLVGVERKNDVQDFGIEESLSELSQLVDTAGLLVVGSTYQKLTSPNPRTYIGSGKVSEIKSAIHALGVETVIFDDELSAGQLRNLEKIFGGDVRVCDRTALILDIFNQRAATHEASLQVSLAQMEYQLPRLTKMWTHLERQAGGKVKGMGEKQIEVDKRILRNQIGILKKELESVRKHRKQYRNRRFSVPVAVVSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQINAVDKVLSELDVSSIPKLIVWNKQ*

>Glyma.17g253900.3.p sequence-type=predicted peptide transcript=Glyma.17g253900.3 locus=Glyma.17g253900 ID=Glyma.17g253900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSGTGTFFYGSVIQPLIRYHYLSPPIPIRPLCCISPLITSIHSNDAVSPQNGTLRFQTEHQQHSEEPLPVPSLSAAEENKATTKLRKKKEDDVVSDNRFKLRNGREVFEEKAYLVGVERKNDVQDFGIEESLSELSQLVDTAGLLVVGSTYQKLTSPNPRTYIGSGKVSEIKSAIHALGVETVIFDDELSAGQLRNLEKIFGGDVRVCDRTALILDIFNQRAATHEASLQVSLAQMEYQLPRLTKMWTHLERQAGGKVKGMGEKQIEVDKRILRNQIGILKKELESVRKHRKQYRNRRFSVPVAVVSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQINAVDKVLSELDVSSIPKLIVWNKH*

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