SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.17g246600

Feature Type:gene_model
Chromosome:Gm17
Start:40347086
stop:40362499
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.17g246600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G47550.1AT SEC3A JGI N/AIEA
PTHR16092PantherFam SEC3/SYNTAXIN-RELATED JGI N/AIEA
PF04129Pfam Vps52 / Sac2 family JGI N/AIEA
PF09763Pfam Exocyst complex component Sec3 JGI N/AIEA
PF15277Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH JGI N/AIEA

Gene model name correspondences to Glyma.17g246600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma17g36540 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.17g246600
>Glyma.17g246600.1 sequence-type=CDS polypeptide=Glyma.17g246600.1.p locus=Glyma.17g246600 id=Glyma.17g246600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGAAATCGAGCGCCGACGACGGTGAGCTCCGGCGAGCTTGCGACGCCGCAATTGAGGACCCGAAGCAGAAGATCGTGATGGCGCTGCGCGTCGCCAAGAGTCACGGCATCTTAGGAAAACCTTCCTCCAAGCTCGGTCGCATGGCCAAGCCTAGGGTTCTCGCTCTCTCCATTGTTGGTGACGACGTGGTGTTTCCTGCAGCGAAATCCAAGGGGCAGAGGACAACGGCTTTTCTTCGAGTTTTGAAGTATTCTACGGGAGGAGTTCTTGAACCTGCAAAACTATACAAGCTAAAGCACCTGTCAAAAGTGGAAGTTGTAGCAAATGATCCCAGTGGATGTACATTTACTCTGGGATTTGATAACCTTAGAAGCCAGAGTGTGGCTCCTCCTCAATGGACCATGCGCAATATCGATGACAGGAATCGCCTCCTTCTTTGCATCTTGAACATCTGTAAAGATGTTTTGGGCCGCCTTCCTAAGGTTGTTGGTATAGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACACCACCTGTTTCTGCTCAGAATAAAGTGCGAGATGGTGGTCCTGTTGCATCTGTTGTGACTGAAACAGAAATCACAGAATTGAAAGTCAATGTTGAAAAGGAACTTGTTTCGCAGGCAGAGGAAGAGGACATGGAGGCTCTTTTGGGAACTTATGTCATGGGTATTGGTGAAGCAGAGGAATTTTCTGAAAGGTTGAAGAGAGAGCTCCAGGCTCTGGAAGCTGCAAATGTGCATGCTCTTTTAGAAAGTGAACCTTTGATGGATGAGGTGTTGCAAGGACTTGATGCCGCAACCAGTGTTGTGGAAGATATGGATGAATGGTTAAGCATATTCAATGTAAAACTCCGGCACATGAGGGAGGATATTGCATCAATAGAAACTCGCAATAACAACCTGGAAATGCAATCAGTAAATAACAAATCTCTCATTGAAGAGCTTGATAAGCTTCTTGAGCGATTGCGTGTCCCTTCTGAGTATGCCACAAGTTTGACAGGAGGTTCATTTGATGAAGCCCGAATGCTTCAAAATGTAGAAGCATGTGAATGGTTGACCAGTGCCTTGCGTGGTCTTGAAATGCCTAATCTAGACCCTAGTTATGCAAACATGAGAGCTGTTAAAGAGAAGCGTGCAGAACTTGAAAAATTAAAATCTACTTTTGTCAGGAGAGCCTCTGAATTCTTGAGAAATTATTTTGCTAGTTTGGTGGACTTCATGATAAGTGATAAAAGTTACTTTTCTCAGCGGGGACAGTTAAAGAGGCCTGATCATGCTGACCTGCGGTACAAGTGCAGGACATATGCACGTCTTCTGCAACATTTGAAGAGTCTTGACAAGAATTGTTTGGGTCCATTGAGGAAAGCTTATTGCAGTTCTCTAAACTTGCTTCTTCGCAGAGAGGCCCGTGAGTTTGCAAATGAACTTCGTGCTAGTACTAAAGCATCTAGAAATCCAACTGTTTGGCTTGAAGGTTCCACAGGTTCTGGTCAGAATGTAAATGCTACTGACACTTCCACAGTCTCTGATGCTTATGCAAAGATGCTTACGATTTTCATCCCGCTTCTAGTGGATGAGAGTTCTTTTTTTGCACACTTCATGTGCTTTGAAGTTCCTACACTTGTTCCTCCTGGAGGTGTTGTTAATGGCAACAAAGCTGGATATGATGATGATGATGATTTGGGAATTATGGACATTGATGAGAATGACAGCAAATCTGGTAAAAATTCTGTGGAGCTTGAAGCTTTGAATAAATCACTTAAGGATTTACTTGATGGAATACAAGAAGACTTCTATGCTGTTGTGGATTGGGCTTACAAGATTGACCCTTTACGCTGTATATCAATGCACGGAATAACAGAACGCTATCTCTCTGGTCAGAAAGCTGATGCAGCAGGATTTGTACGTGATTTGCTTCGTGACCTGGAGTCTCGGATATCTATGCAGTTCAACCGATTTGTTGACGAAGCTTGCCATCAAATTGAAAGAAATGAACGCAATGTTCGCCAAATGGGTGTCCTATCCTACATTCCCAGATTTGCAACCCTTGCAACTCGGATGGAGCAGTACATCCAGGGTCAGTCTAGGGATTTGGTTGACCAAGCATATACAAAATTTGTTAGCATAATGTTTGCAACTTTAGAAAAAATTGCACAAACAGATCCAAAGTATGCAGATATTTTCCTTTTTGAGAACTATGCTGCTTTTCAGAATAGTTTGTATGACCTCGCCAACATTGTGCCTACTTTGGCCAAGTTTTATCATCAGGCCAGTGAAGCCTATGAACAAGCTTGTACACGCCATATTAGCATGATTATCTACTATCAATTTGAACGCCTTTTCCAGTTTGCTCGAAGGATTGAAGACTTGATGTTCACTGTTGCACCTGAAGAGATTCCTTTTCAGCTTGGACTGTCAAAAATGGATCTTCGGAAGATGTTAAAATCCAGTTTATCTGGGGTTGACAAGTCCATTGCTGCGATGTATAAGAAACTGCAAAAGAATTTGACTTCGGAGGAATTGTTACCCTCCTTATGGGACAAATGCAAGAAGGAATTTCTTGATAAGTACGAAAGTTTTGCCCAACTCGTGTCTAAGATTTACCCTACTGAGACGATCCCGTCTGTAGCAGAGATGAGAGACCTTTTAGCTTCCATGTAG
Predicted protein sequences of Glyma.17g246600
>Glyma.17g246600.1.p sequence-type=predicted peptide transcript=Glyma.17g246600.1 locus=Glyma.17g246600 id=Glyma.17g246600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAKSSADDGELRRACDAAIEDPKQKIVMALRVAKSHGILGKPSSKLGRMAKPRVLALSIVGDDVVFPAAKSKGQRTTAFLRVLKYSTGGVLEPAKLYKLKHLSKVEVVANDPSGCTFTLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICKDVLGRLPKVVGIDVVEMALWAKENTPPVSAQNKVRDGGPVASVVTETEITELKVNVEKELVSQAEEEDMEALLGTYVMGIGEAEEFSERLKRELQALEAANVHALLESEPLMDEVLQGLDAATSVVEDMDEWLSIFNVKLRHMREDIASIETRNNNLEMQSVNNKSLIEELDKLLERLRVPSEYATSLTGGSFDEARMLQNVEACEWLTSALRGLEMPNLDPSYANMRAVKEKRAELEKLKSTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKASRNPTVWLEGSTGSGQNVNATDTSTVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGVVNGNKAGYDDDDDLGIMDIDENDSKSGKNSVELEALNKSLKDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRDLLRDLESRISMQFNRFVDEACHQIERNERNVRQMGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSIMFATLEKIAQTDPKYADIFLFENYAAFQNSLYDLANIVPTLAKFYHQASEAYEQACTRHISMIIYYQFERLFQFARRIEDLMFTVAPEEIPFQLGLSKMDLRKMLKSSLSGVDKSIAAMYKKLQKNLTSEELLPSLWDKCKKEFLDKYESFAQLVSKIYPTETIPSVAEMRDLLASM*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo