Glyma.17g233800

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Report for Sequence Feature Glyma.17g233800

Feature Type:	gene_model
Chromosome:	Gm17
Start:	38930183
stop:	38939118
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.17g233800

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G25230.1	AT	rotamase FKBP 1	JGI	N/A	IEA
GO:0000413	GO-bp	protein peptidyl-prolyl isomerization	EnsemblGenomes	N/A	IEA
GO:0006457	GO-bp	protein folding	JGI	N/A	IEA
GO:0061077	GO-bp	chaperone-mediated protein folding	EnsemblGenomes	N/A	IEA
GO:0005737	GO-cc	cytoplasm	EnsemblGenomes	N/A	IEA
GO:0003755	GO-mf	peptidyl-prolyl cis-trans isomerase activity	EnsemblGenomes	N/A	IEA
GO:0005515	GO-mf	protein binding	EnsemblGenomes	N/A	IEA
GO:0005515	GO-mf	protein binding	JGI	N/A	IEA
GO:0005528	GO-mf	FK506 binding	EnsemblGenomes	N/A	IEA
GO:0016853	GO-mf	isomerase activity	EnsemblGenomes	N/A	IEA
KOG0543	KOG	FKBP-type peptidyl-prolyl cis-trans isomerase	JGI	N/A	IEA
PTHR10516	Panther	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	JGI	N/A	IEA
PTHR10516:SF66	Panther		JGI	N/A	IEA
PF00254	PFAM	FKBP-type peptidyl-prolyl cis-trans isomerase	JGI	N/A	IEA

Expression Patterns of Glyma.17g233800

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.17g233800 not represented in the dataset	Glyma.17g233800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.17g233800 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma17g35210	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.17g233800

Limit To All Plant Sequences

>Glyma.17g233800.2 sequence-type=transcript locus=Glyma.17g233800 ID=Glyma.17g233800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATTTTTTATTCACTCACACAGACACAGTTCAGGAGGCACACATGTGACACCTGATTGTTGTTCTAACAATCCGAGGAAGATTGTTCGAGAATAGACTAGAAAGGAAAAAACATGGTGGTGCTGTTGTCGGAGGAGGATGAATTCGACGAGGAGCCCGGCGAGGTAGTGGATTCAGCGCCGCCGCAGAAGGTCGGCGAAGAGAGAGAATTCAGTGGTTTCAAGAAGAAGCTTTTCAAACCCGGACAGGGATTGGAATTCCCCAACTTCGACGACGTCGTAACTGTTCGCTGTGTTGGAATTGGAACATTGCTCGATGGAACAACGTTTGATTCCACTAGGGAGAGGGATCAACCTAGGACGTTTGCTCTTGGAAAAGATGACATTGGTGCTGGTTTGGACCGTGCCATTATCACTATGAAGAAAGGGGAGGTGGCATTGTTCACGTTGCCCGGAGATGGTGGTGATGGCGATGTTTCGCTTGATTCCGACGACTCTTCGGCTGTGCGGTTTGAGGTGGAGCTCGTTTCGTGGATCACGGTGGTGGATGTTTGCAAAGATGGTGGAGTTGTCAAGAAAATTCTGGAGAAGGGGAGTGGCATTGAGCGCCCTGGTGATCTTGATGAAGTGCTTGTAAAGTATCGGGTGGTGCTTGGTGATGGCACTGTTGTTGTGGAGACGCTGGAAGGAGGAGTTGAGTTTCACATGAAGGATGGTCATCTTTTTCCTATATTGCCAAAAGTAATCATGACTATGACAAGGGGAGAGAAGGCTGAATTAATTCTCCAACCCCAGTATGCCTTTGGGGAGAAGGGGAGAGAAGCTGGCAGTGGGCTCTGTTCAATTCCTCCGAATTCAGTGCTGCATGTTAATATTGAATTGGTGTCCTTCAAGCCTGTCATAAATGTTACTGGTGACTCCAAGGTGATTAAAAAGATTTTGAAAGAAGGGGAGGGTGCTTTCACAGCCAATGAAGGTGCAAATGTTACTGTGAGCTTCACAGCTATGCTAGAAGATGGCACTGTATTTGAGAAAAGAGGAATTGGTGAAACACTACCCTTGGAATTCATAACTGATGAGGAACAAGTGATTACTGGTCTAGACCGAGCTGTGGCAACAATGAAGAAGGGTGAGAGGGCGATAATTAGCATACATCCTGATTATGCATTTGGAGATGTTGAAGTGAGACGAGATATTGCTATTGTGCCACCGGGCTCAAATGTAGTCTATGACATTGAGATGATGGATTTTATTAAGGAGAAAGCACCATGGGAATTGAATAGTAAGGAGAAAATTGAGGTGGCTGGGAGGATGAAAGAAGAAGGAAATGTATTATTTAAAGTTGGCAATTATCAGCGAGCAGGAAAGAAATATGAAAAGGCTGCTGATTTTGTTGATGAAGATGGATCCTTTGGGTTTGATGAGCAAAAGCAAGCTCAGACACTGAAAGTGTCATGCTGGTTGAATAGTGCAGCTTGTAGCCTTAAACTTAATGACTTTCCTGGAGCAATCAAGCTATGTTCACAGGTGCTTGATGTTGAATTTTGCAATGTGAAAGCTTTTTACAGACGAGCACAAGCATATATAGAAACTGGAGATTATCTTTTAGCAGATGTAGACATCAAGAAAGCTCTTGTGGTGGACCCACAAAACAGAGATGTTAAGGTAATTCAGAAGAAATTGAAGCAACTTCAAGCTGACAGTGACAAAAAAGATGCTAAGCTATATGAAAACATGCTTGCACGTAAAACAAAGGACCCATCTATGGCTATAAAGAGATTGAAGGTAGAGAAAGATCAGGGGGAAAATGAAGAGGTTGCAAGAATGGAAATTGACGAAGTTGCTGATAGCGCAGTGATTCAATAGTTGATTCTTGTTGAACATGTATAGATTATAATATAAAGCTTCTATTAACAAAATATGTAAACTAGTAGATGGAAGTTGCAAATTGGATTCGGATGAAAACCTACATGTTCCAATAGAGTACATTTATGTATTCCATCAACTTGTAATCTTGCCACATTTCAGATGAACATTATACATACTACATTCGCATGCAAATCTTGTTTAATTGTTAGCTCTTTACATTTATTTTGGATA

Coding sequences of Glyma.17g233800

Limit To All Plant Sequences

>Glyma.17g233800.1 sequence-type=CDS polypeptide=Glyma.17g233800.1.p locus=Glyma.17g233800 ID=Glyma.17g233800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGGTGCTGTTGTCGGAGGAGGATGAATTCGACGAGGAGCCCGGCGAGGTAGTGGATTCAGCGCCGCCGCAGAAGGTCGGCGAAGAGAGAGAATTCAGTGGTTTCAAGAAGAAGCTTTTCAAACCCGGACAGGGATTGGAATTCCCCAACTTCGACGACGTCGTAACTGTTCGCTGTGTTGGAATTGGAACATTGCTCGATGGAACAACGTTTGATTCCACTAGGGAGAGGGATCAACCTAGGACGTTTGCTCTTGGAAAAGATGACATTGGTGCTGGTTTGGACCGTGCCATTATCACTATGAAGAAAGGGGAGGTGGCATTGTTCACGTTGCCCGGAGATGGTGGTGATGGCGATGTTTCGCTTGATTCCGACGACTCTTCGGCTGTGCGGTTTGAGGTGGAGCTCGTTTCGTGGATCACGGTGGTGGATGTTTGCAAAGATGGTGGAGTTGTCAAGAAAATTCTGGAGAAGGGGAGTGGCATTGAGCGCCCTGGTGATCTTGATGAAGTGCTTGTAAAGTATCGGGTGGTGCTTGGTGATGGCACTGTTGTTGTGGAGACGCTGGAAGGAGGAGTTGAGTTTCACATGAAGGATGGTCATCTTTTTCCTATATTGCCAAAAGTAATCATGACTATGACAAGGGGAGAGAAGGCTGAATTAATTCTCCAACCCCAGTATGCCTTTGGGGAGAAGGGGAGAGAAGCTGGCAGTGGGCTCTGTTCAATTCCTCCGAATTCAGTGCTGCATGTTAATATTGAATTGGTGTCCTTCAAGCCTGTCATAAATGTTACTGGTGACTCCAAGGTGATTAAAAAGATTTTGAAAGAAGGGGAGGGTGCTTTCACAGCCAATGAAGGTGCAAATGTTACTGTGAGCTTCACAGCTATGCTAGAAGATGGCACTGTATTTGAGAAAAGAGGAATTGGTGAAACACTACCCTTGGAATTCATAACTGATGAGGAACAAGTGATTACTGGTCTAGACCGAGCTGTGGCAACAATGAAGAAGGGTGAGAGGGCGATAATTAGCATACATCCTGATTATGCATTTGGAGATGTTGAAGTGAGACGAGATATTGCTATTGTGCCACCGGGCTCAAATGTAGTCTATGACATTGAGATGATGGATTTTATTAAGGAGAAAGCACCATGGGAATTGAATAGTAAGGAGAAAATTGAGGTGGCTGGGAGGATGAAAGAAGAAGGAAATGTATTATTTAAAGTTGGCAATTATCAGCGAGCAGGAAAGAAATATGAAAAGGCTGCTGATTTTGTTGATGAAGATGGATCCTTTGGGTTTGATGAGCAAAAGCAAGCTCAGACACTGAAAGTGTCATGCTGGTTGAATAGTGCAGCTTGTAGCCTTAAACTTAATGACTTTCCTGGAGCAATCAAGCTATGTTCACAGGTGCTTGATGTTGAATTTTGCAATGTGAAAGCTTTTTACAGACGAGCACAAGCATATATAGAAACTGGAGATTATCTTTTAGCAGATGTAGACATCAAGAAAGCTCTTGTGGTGGACCCACAAAACAGAGATGTTAAGGTAATTCAGAAGAAATTGAAGCAACTTCAAGCTGACAGTGACAAAAAAGATGCTAAGCTATATGAAAACATGCTTGCACGTAAAACAAAGGACCCATCTATGGCTATAAAGAGATTGAAGGTAGAGAAAGATCAGGGGGAAAATGAAGAGGTTGCAAGAATGGAAATTGACGAAGTTGCTGATAGCGCAGTGATTCAATAG

>Glyma.17g233800.2 sequence-type=CDS polypeptide=Glyma.17g233800.2.p locus=Glyma.17g233800 ID=Glyma.17g233800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGGTGCTGTTGTCGGAGGAGGATGAATTCGACGAGGAGCCCGGCGAGGTAGTGGATTCAGCGCCGCCGCAGAAGGTCGGCGAAGAGAGAGAATTCAGTGGTTTCAAGAAGAAGCTTTTCAAACCCGGACAGGGATTGGAATTCCCCAACTTCGACGACGTCGTAACTGTTCGCTGTGTTGGAATTGGAACATTGCTCGATGGAACAACGTTTGATTCCACTAGGGAGAGGGATCAACCTAGGACGTTTGCTCTTGGAAAAGATGACATTGGTGCTGGTTTGGACCGTGCCATTATCACTATGAAGAAAGGGGAGGTGGCATTGTTCACGTTGCCCGGAGATGGTGGTGATGGCGATGTTTCGCTTGATTCCGACGACTCTTCGGCTGTGCGGTTTGAGGTGGAGCTCGTTTCGTGGATCACGGTGGTGGATGTTTGCAAAGATGGTGGAGTTGTCAAGAAAATTCTGGAGAAGGGGAGTGGCATTGAGCGCCCTGGTGATCTTGATGAAGTGCTTGTAAAGTATCGGGTGGTGCTTGGTGATGGCACTGTTGTTGTGGAGACGCTGGAAGGAGGAGTTGAGTTTCACATGAAGGATGGTCATCTTTTTCCTATATTGCCAAAAGTAATCATGACTATGACAAGGGGAGAGAAGGCTGAATTAATTCTCCAACCCCAGTATGCCTTTGGGGAGAAGGGGAGAGAAGCTGGCAGTGGGCTCTGTTCAATTCCTCCGAATTCAGTGCTGCATGTTAATATTGAATTGGTGTCCTTCAAGCCTGTCATAAATGTTACTGGTGACTCCAAGGTGATTAAAAAGATTTTGAAAGAAGGGGAGGGTGCTTTCACAGCCAATGAAGGTGCAAATGTTACTGTGAGCTTCACAGCTATGCTAGAAGATGGCACTGTATTTGAGAAAAGAGGAATTGGTGAAACACTACCCTTGGAATTCATAACTGATGAGGAACAAGTGATTACTGGTCTAGACCGAGCTGTGGCAACAATGAAGAAGGGTGAGAGGGCGATAATTAGCATACATCCTGATTATGCATTTGGAGATGTTGAAGTGAGACGAGATATTGCTATTGTGCCACCGGGCTCAAATGTAGTCTATGACATTGAGATGATGGATTTTATTAAGGAGAAAGCACCATGGGAATTGAATAGTAAGGAGAAAATTGAGGTGGCTGGGAGGATGAAAGAAGAAGGAAATGTATTATTTAAAGTTGGCAATTATCAGCGAGCAGGAAAGAAATATGAAAAGGCTGCTGATTTTGTTGATGAAGATGGATCCTTTGGGTTTGATGAGCAAAAGCAAGCTCAGACACTGAAAGTGTCATGCTGGTTGAATAGTGCAGCTTGTAGCCTTAAACTTAATGACTTTCCTGGAGCAATCAAGCTATGTTCACAGGTGCTTGATGTTGAATTTTGCAATGTGAAAGCTTTTTACAGACGAGCACAAGCATATATAGAAACTGGAGATTATCTTTTAGCAGATGTAGACATCAAGAAAGCTCTTGTGGTGGACCCACAAAACAGAGATGTTAAGGTAATTCAGAAGAAATTGAAGCAACTTCAAGCTGACAGTGACAAAAAAGATGCTAAGCTATATGAAAACATGCTTGCACGTAAAACAAAGGACCCATCTATGGCTATAAAGAGATTGAAGGTAGAGAAAGATCAGGGGGAAAATGAAGAGGTTGCAAGAATGGAAATTGACGAAGTTGCTGATAGCGCAGTGATTCAATAG

Predicted protein sequences of Glyma.17g233800

Limit To All Plant Sequences

>Glyma.17g233800.1.p sequence-type=predicted peptide transcript=Glyma.17g233800.1 locus=Glyma.17g233800 ID=Glyma.17g233800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVVLLSEEDEFDEEPGEVVDSAPPQKVGEEREFSGFKKKLFKPGQGLEFPNFDDVVTVRCVGIGTLLDGTTFDSTRERDQPRTFALGKDDIGAGLDRAIITMKKGEVALFTLPGDGGDGDVSLDSDDSSAVRFEVELVSWITVVDVCKDGGVVKKILEKGSGIERPGDLDEVLVKYRVVLGDGTVVVETLEGGVEFHMKDGHLFPILPKVIMTMTRGEKAELILQPQYAFGEKGREAGSGLCSIPPNSVLHVNIELVSFKPVINVTGDSKVIKKILKEGEGAFTANEGANVTVSFTAMLEDGTVFEKRGIGETLPLEFITDEEQVITGLDRAVATMKKGERAIISIHPDYAFGDVEVRRDIAIVPPGSNVVYDIEMMDFIKEKAPWELNSKEKIEVAGRMKEEGNVLFKVGNYQRAGKKYEKAADFVDEDGSFGFDEQKQAQTLKVSCWLNSAACSLKLNDFPGAIKLCSQVLDVEFCNVKAFYRRAQAYIETGDYLLADVDIKKALVVDPQNRDVKVIQKKLKQLQADSDKKDAKLYENMLARKTKDPSMAIKRLKVEKDQGENEEVARMEIDEVADSAVIQ*

>Glyma.17g233800.2.p sequence-type=predicted peptide transcript=Glyma.17g233800.2 locus=Glyma.17g233800 ID=Glyma.17g233800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVVLLSEEDEFDEEPGEVVDSAPPQKVGEEREFSGFKKKLFKPGQGLEFPNFDDVVTVRCVGIGTLLDGTTFDSTRERDQPRTFALGKDDIGAGLDRAIITMKKGEVALFTLPGDGGDGDVSLDSDDSSAVRFEVELVSWITVVDVCKDGGVVKKILEKGSGIERPGDLDEVLVKYRVVLGDGTVVVETLEGGVEFHMKDGHLFPILPKVIMTMTRGEKAELILQPQYAFGEKGREAGSGLCSIPPNSVLHVNIELVSFKPVINVTGDSKVIKKILKEGEGAFTANEGANVTVSFTAMLEDGTVFEKRGIGETLPLEFITDEEQVITGLDRAVATMKKGERAIISIHPDYAFGDVEVRRDIAIVPPGSNVVYDIEMMDFIKEKAPWELNSKEKIEVAGRMKEEGNVLFKVGNYQRAGKKYEKAADFVDEDGSFGFDEQKQAQTLKVSCWLNSAACSLKLNDFPGAIKLCSQVLDVEFCNVKAFYRRAQAYIETGDYLLADVDIKKALVVDPQNRDVKVIQKKLKQLQADSDKKDAKLYENMLARKTKDPSMAIKRLKVEKDQGENEEVARMEIDEVADSAVIQ*

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