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Report for Sequence Feature Glyma.17g233000

Feature Type:gene_model
Chromosome:Gm17
Start:38939635
stop:38955759
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.17g233000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G44910.1AT ATPRP40A,PRP40A JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
K12821KEGG Spliceosome JGI N/AIEA
KOG0152 KOG Spliceosomal protein FBP11/Splicing factor PRP40 JGI N/AIEA
PTHR11864PantherFam PRE-MRNA-PROCESSING PROTEIN PRP40 JGI N/AIEA
PTHR11864:SF0PantherFam PRP40 PRE-MRNA PROCESSING FACTOR 40 HOMOLOG A (YEAST) JGI N/AIEA
PF00397Pfam WW domain JGI N/AIEA
PF01846Pfam FF domain JGI N/AIEA

Proteins Associated with Glyma.17g233000
LocusGene SymbolProtein Name
MED35-4 Mediator Complex 35 gene 4

Gene model name correspondences to Glyma.17g233000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma17g35120 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.17g233000
>Glyma.17g233000.1 sequence-type=CDS polypeptide=Glyma.17g233000.1.p locus=Glyma.17g233000 id=Glyma.17g233000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCAATAATTCTCAACCCTCCAGCATGCAGTTTCGGCCAGTCATTCAAGCTCAGCAAGGGCAACCATTTGTTCCAATGAATTCACAACAATTTGGACCTGCAGGACATGCTATTCCTTCTTCAAATGCGGGAATGCCTGTCATTCAAGGTCAGCAATTGCAGTATTCTCAACCAATGCAGCAGTTGACTCCAAGACCAATGCAGCCTGGTCATCCTGTTCCTTCATCACAAGCTATACCTATGCAATATATTCAGACAAACCGGCCACTGACATCCATTCCAACACATTCACAGCAAACTGTTCCCCCTTTTAGCAATCATATGCCTGGCTTGGCTGTTTCAGTAGCAGCTCCTCATTCTTCATATTTCACACTATCTTATGGTCAGCAGCAAGATAATGCAAACGCATTGGCTCAATACCAGCATCCACCTCAAATGTTTGCTTCTCCTGCTGGTCAATCTTGGCCATCCTCTGCATCTCAGAGTGTTGCGGCTGTTACATCTGTGCAGTCGGCTGGGGTGCAATCATCTGGTGCTGCATCAACTGATACGGTGACTAATGCTACTAACCAGCAATCCTTATCTGATTGGCAAGAGCACACTTCTGCTGATGGGAGAAGATATTATTACAACAAGAGGACAAGGCAATCAAGTTGGGAAAAACCTTTAGAATTGATGTCACCTATAGAGAGAGCTGATGCATCAACTGTTTGGAAAGAATTCACTTCAGAAGGAAGAAAGTATTATTACAACAAGGTTACTCAGCAATCAACGTGGTCAATACCAGAGGAACTTAAGTTGGCTCGTGAGCAGGCACAGAAAGCTGCAAACCAGGGAATGCAGTCAGAAACAAATGATACATCCAATGCTGCAGTCTCCTCCACAGCAACACCAACACCAACACCAACAGCAGTTAATGCAGCTAGCTTGAACACTTCCTTGACATCAAATCATTCAAATGGGCTTGCTTCCAGCCCATCTTCTGTCACACCAATTGCAGCAACCGATTCTCAACAGTCGGTTTCTGGATTATCTGGGTCCTCTGTTTCTCACTCTATAGTTACCCCAAGCACCACAGGAGTAGAACCAAGCACTGTGGTAACTACGAGTGCTGCACCTACAATAGTTGCAGGAAGCTCTGGACTAGCTGAGAATTCACCTCAACAATCCAAAATGCCACCCCTTGTTGAAAATCAAGCATCTCAAGATTTTGCTTCTGTAAATGGATCTTCTCTTCAAGATATCGAGGAAGCCAAAAGATCATTGCCTGTGGTTGGAAAAAATAATGTTGTTCCACCTGAAGAGAAAACCAATGACGATGAAACCTTGGTATATGCAAATAAACTGGAAGCAAAACTTGCATTTAAAGCTCTTTTGGAATCTGTGAATGTTCAGTCTGATTGGACATGGGAACAGGCAATGAGAGAAATCATCAATGACAAAAGATATAATGCCCTAAAAACACTTGGTGAGCGAAAACAGGCTTTTAATGAGTATTTGGGTCAAAGGAAGAAGCTGGAGGCTGAAGAGAGGCGCATGAAGCAGAAAAGAGCCCGTGAAGAATTCACAAAAATGTTGGAAGAGTGCAAGGAACTTACATCATCCATGAGGTGGAGCAAAGCTATTAGTATGTTTGAAAATGATGAACGATTCAATGCTGTTGAAAGACTAAGGGACCGAGAAGATTTATTTGAAAGCTACATGGTGGAACTTGAGAGGAAGGAAAAGGAAAATGCTGCAGAGGAACACCGCCGGAATATAGCAGAATATAGAAAATTTCTGGAGTCCTGTGACTATGTGAAGGCGAATAGTCATTGGCGAAAAATCCAAGATCGGTTAGAGGATGATGATAGATACTTGCGACTTGAAAAAATTGACTGCTTGCTAGTTTTCCAGGACTATATTCGGGACTTGGAGAAAGAAGAAGAGGAACAAAAAAGAATACAGAAGGATCAAATCCGTCGGGGTGAAAGGAAAAACCGTGATGCATTTCGCAAGTTGCTTGAAGAACATGTTGCTGCTGGAATTCTTACTGCTAAAACTCAATGGCATGAATATTGCTTGAAGGTCAGGGATTTACCTCAATATCAAGCTGTTGCGTCAAATACATCTGGTTCCACTCCAAAAGATTTGTTTGAGGATGCTGCAGAGGATCTTGAAAAACAGTATCATGAAGACAAGACGCTCATAAAAGATACAATTAAGTCAGGCAAGATCACTGTAGTGACTACATCAGTATTTGAAGAGTTTAAGGTTGCTGTCTTGGAAGAAGCTGCATGCCAAACAATATCCGAGATCAATTTGAAGCTTATATTCGAAGAGTTGTTAGAGAGAGCCAAGGAGAAGGAGGAGAAAGAAGCCAAGAAGCGCCAACGCCTTGCTGATGACTTTACTAACCTGTTATATACATTCAAGGATATTACTGCTTCCTCAAAATGGGAGGATTGCAAGTCTCTTTTTGAGGAGGCTCAAGAGTACAGGTCAATTGGAGACGAAAGCTATAGTAGAGAAATTTTTGAGGAATACATCACATACTTGAAGGAAAAAGCTAAAGAGAAGGAACGCAAGCGTGAAGAGGAAAAGGCTAAAAAGGAGAAAGAAAGAGAAGAGAAAGAGAAACGGAAGGAGAAGGAGAAAAAAGAAAAAGATAGAGAACGTGAAAAAGATAAGTCTAAGGAACGTCATAGGAAGGATGAAACAGATAGTGATAATCAAGATATGACTGATGGCCATGGTTACAAAGAGGAGAAGAAAAAAGAAAAGGATAAGGAAAGGAAACATCGGAAAAGGCATCAGAGCAGTATAGATGATGTGGATTCTGAAAAGGAAGAGAAGGAAGAATCTAAAAAATCACGAAGGCATGGCAGTGAACGCAAGAAGTCTCGGAAGCAAGCAGACTCTCCTGAATCAGACAACGAAAACCGGCATAGAAGACACAAGAGGGAGCACTGGGATGGTTCAAGGAAAACTGGGGGGCATGAGGAACTTGAAGACGGGGAGCTCGGGGATGATGTTGAGAACTAG
Predicted protein sequences of Glyma.17g233000
>Glyma.17g233000.1.p sequence-type=predicted peptide transcript=Glyma.17g233000.1 locus=Glyma.17g233000 id=Glyma.17g233000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MANNSQPSSMQFRPVIQAQQGQPFVPMNSQQFGPAGHAIPSSNAGMPVIQGQQLQYSQPMQQLTPRPMQPGHPVPSSQAIPMQYIQTNRPLTSIPTHSQQTVPPFSNHMPGLAVSVAAPHSSYFTLSYGQQQDNANALAQYQHPPQMFASPAGQSWPSSASQSVAAVTSVQSAGVQSSGAASTDTVTNATNQQSLSDWQEHTSADGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSEGRKYYYNKVTQQSTWSIPEELKLAREQAQKAANQGMQSETNDTSNAAVSSTATPTPTPTAVNAASLNTSLTSNHSNGLASSPSSVTPIAATDSQQSVSGLSGSSVSHSIVTPSTTGVEPSTVVTTSAAPTIVAGSSGLAENSPQQSKMPPLVENQASQDFASVNGSSLQDIEEAKRSLPVVGKNNVVPPEEKTNDDETLVYANKLEAKLAFKALLESVNVQSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKRAREEFTKMLEECKELTSSMRWSKAISMFENDERFNAVERLRDREDLFESYMVELERKEKENAAEEHRRNIAEYRKFLESCDYVKANSHWRKIQDRLEDDDRYLRLEKIDCLLVFQDYIRDLEKEEEEQKRIQKDQIRRGERKNRDAFRKLLEEHVAAGILTAKTQWHEYCLKVRDLPQYQAVASNTSGSTPKDLFEDAAEDLEKQYHEDKTLIKDTIKSGKITVVTTSVFEEFKVAVLEEAACQTISEINLKLIFEELLERAKEKEEKEAKKRQRLADDFTNLLYTFKDITASSKWEDCKSLFEEAQEYRSIGDESYSREIFEEYITYLKEKAKEKERKREEEKAKKEKEREEKEKRKEKEKKEKDREREKDKSKERHRKDETDSDNQDMTDGHGYKEEKKKEKDKERKHRKRHQSSIDDVDSEKEEKEESKKSRRHGSERKKSRKQADSPESDNENRHRRHKREHWDGSRKTGGHEELEDGELGDDVEN*






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