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Report for Sequence Feature Glyma.17g232000

Feature Type:gene_model
Chromosome:Gm17
Start:38618854
stop:38632440
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.17g232000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G78910.1AT JGI N/AIEA
5.4.99.24EC 23S rRNA pseudouridine955/2504/2580 synthase JGI N/AIEA
GO:0001522GO-bp pseudouridine synthesis JGI N/AIEA
GO:0009451GO-bp RNA modification JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0009982GO-mf pseudouridine synthase activity JGI N/AIEA
KOG1919 KOG RNA pseudouridylate synthases JGI N/AIEA
PTHR11079PantherFam CYTOSINE DEAMINASE FAMILY MEMBER JGI N/AIEA
PF00849Pfam RNA pseudouridylate synthase JGI N/AIEA

Gene model name correspondences to Glyma.17g232000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma17g35030 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.17g232000
>Glyma.17g232000.1 sequence-type=CDS polypeptide=Glyma.17g232000.1.p locus=Glyma.17g232000 id=Glyma.17g232000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTGAATCATGTGAGCAATAATAATAGCTGCTCATGGCTGTTGTTTGTAGCGAGGCACTACTCTAGAATTCAACCCCCAAGGCCGGTTTCTGTTGAACCAGTAATCAGTGTTTCTAACAATATTGCCCGCCTGGATGCTCCCAAAGAAGGTCCTAAACCCAGACAGCTACTATCATTGCCACCTTTTCCTGGTCACCCCTTGCCCGACAAGAGCTCAATTAGTGGTTCTCGACAGCGTGATTATGTTACTGCTGTCAATTGGATTAAGTATTACTTCAAGGGCACATGGGGTTCTGTCATTGAATCCCATTTCAGGGAGGGTCTTGTGCAAATGGAGGCTGATGACTCTTCCACTCAGAAAGAAGAGCAGATGAAACCTATGCGAAAGATTAGACCAAATGAAGTGATGAAACGTGGTGCCAGAGTTCATGTGCCTGTGTCAATTTGTGAGACTAGGATTTCCAAAAGATACGATGCTATTCCAAGTGGAACACTATATCCAAATGCCGACGAAATTAAGTATCTGCAGAGGCTGGTGATTTACAAGGACTCAGCTATTATTGTGCTAAATAAACCTCCAAAATTGCCGGTTAAGGGGAGTTTGCCAGTTCATAATAGCATGGATGCTTTGGCAGCTGCGGCACTATCCTATGATTATGATGAGGGTCCTAAACTGGTTCACCGTCTTGACAGAGAGAGCAGTGGCATCCTTTTACTGGGGAGAACTAAAGATAGTGTATCTCATCTCCAATGGTTGTTCAGTAACATTAACAATGCAAAATCTTCTTGTAAGGATTGGAATGAAGCATGTGAAGCTACATATCAGAGGTATTGGGCATTAGTCATAGGGACTCCCAAGGAGAAGGAAGGCATAATTCATGCTCCTCTTTCTAAGGTGCTTCTAAATGATGGGAAGACTGAGAGGATAATACTAGCTCACCATTCAAGTGTAGAACCTCGCCAAGAGGCTGTAACTGAGTATAGGGTGCTTGGTCCACAGATAAATGGATGCTCGTGGGTTGAGCTGCGTCCACTTACTTACCGAAAGCATCAGTTGCGTGTCCATTGTGCTGAAGCACTTGGCACACCGATAGTGGGTGACTATAAGTATGGCTGGTTTGTGCACAGCCGATGGAAACAAATGCCGCGAGTGGATATCGAGCCAACCACCGGAAAACCATACAAGTTGCGGAGGCCGGAAGGCCTAGATGTTCAGAAGGGAAGTGTTTTATCAAAGGTTCCTCTATTGCATCTTCACTGCAGAGAACTTGTACTCCCCAACATTGTTAAGTTTATGCATGTTTTGAACAATAGTTCAGAAGAACTACGTACTTCACTTAGAGAGCAGCCTGATGTTCTTCGCTTTGTGGCAACAATGCCTTCACATATGAGAATTAGTTGGAATCTTATGTCATCGTATTTAGTCTGA

>Glyma.17g232000.3 sequence-type=CDS polypeptide=Glyma.17g232000.3.p locus=Glyma.17g232000 id=Glyma.17g232000.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTGAATCATGTGAGCAATAATAATAGCTGCTCATGGCTGTTGTTTGTAGCGAGGCACTACTCTAGAATTCAACCCCCAAGGCCGGTTTCTGTTGAACCAGTAATCAGTGTTTCTAACAATATTGCCCGCCTGGATGCTCCCAAAGAAGGTCCTAAACCCAGACAGCTACTATCATTGCCACCTTTTCCTGGTCACCCCTTGCCCGACAAGAGCTCAATTAGTGGTTCTCGACAGCGTGATTATGTTACTGCTGTCAATTGGATTAAGTATTACTTCAAGGGCACATGGGGTTCTGTCATTGAATCCCATTTCAGGGAGGGTCTTGTGCAAATGGAGGCTGATGACTCTTCCACTCAGAAAGAAGAGCAGATGAAACCTATGCGAAAGATTAGACCAAATGAAGTGATGAAACGTGGTGCCAGAGTTCATGTGCCTGTGTCAATTTGTGAGACTAGGATTTCCAAAAGATACGATGCTATTCCAAGTGGAACACTATATCCAAATGCCGACGAAATTAAGTATCTGCAGAGGCTGGTGATTTACAAGGACTCAGCTATTATTGTGCTAAATAAACCTCCAAAATTGCCGGTTAAGGTTCACCGTCTTGACAGAGAGAGCAGTGGCATCCTTTTACTGGGGAGAACTAAAGATAGTGTATCTCATCTCCAATGGTTGTTCAGTAACATTAACAATGCAAAATCTTCTTGTAAGGATTGGAATGAAGCATGTGAAGCTACATATCAGAGGTATTGGGCATTAGTCATAGGGACTCCCAAGGAGAAGGAAGGCATAATTCATGCTCCTCTTTCTAAGGTGCTTCTAAATGATGGGAAGACTGAGAGGATAATACTAGCTCACCATTCAAGTGTAGAACCTCGCCAAGAGGCTGTAACTGAGTATAGGGTGCTTGGTCCACAGATAAATGGATGCTCGTGGGTTGAGCTGCGTCCACTTACTTACCGAAAGCATCAGTTGCGTGTCCATTGTGCTGAAGCACTTGGCACACCGATAGTGGGTGACTATAAGTATGGCTGGTTTGTGCACAGCCGATGGAAACAAATGCCGCGAGTGGATATCGAGCCAACCACCGGAAAACCATACAAGTTGCGGAGGCCGGAAGGCCTAGATGTTCAGAAGGGAAGTGTTTTATCAAAGGTTCCTCTATTGCATCTTCACTGCAGAGAACTTGTACTCCCCAACATTGTTAAGTTTATGCATGTTTTGAACAATAGTTCAGAAGAACTACGTACTTCACTTAGAGAGCAGCCTGATGTTCTTCGCTTTGTGGCAACAATGCCTTCACATATGAGAATTAGTTGGAATCTTATGTCATCGTATTTAGTCTGA
Predicted protein sequences of Glyma.17g232000
>Glyma.17g232000.1.p sequence-type=predicted peptide transcript=Glyma.17g232000.1 locus=Glyma.17g232000 id=Glyma.17g232000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLNHVSNNNSCSWLLFVARHYSRIQPPRPVSVEPVISVSNNIARLDAPKEGPKPRQLLSLPPFPGHPLPDKSSISGSRQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQMEADDSSTQKEEQMKPMRKIRPNEVMKRGARVHVPVSICETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVLNKPPKLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLLGRTKDSVSHLQWLFSNINNAKSSCKDWNEACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERIILAHHSSVEPRQEAVTEYRVLGPQINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIVKFMHVLNNSSEELRTSLREQPDVLRFVATMPSHMRISWNLMSSYLV*

>Glyma.17g232000.3.p sequence-type=predicted peptide transcript=Glyma.17g232000.3 locus=Glyma.17g232000 id=Glyma.17g232000.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLNHVSNNNSCSWLLFVARHYSRIQPPRPVSVEPVISVSNNIARLDAPKEGPKPRQLLSLPPFPGHPLPDKSSISGSRQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQMEADDSSTQKEEQMKPMRKIRPNEVMKRGARVHVPVSICETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVLNKPPKLPVKVHRLDRESSGILLLGRTKDSVSHLQWLFSNINNAKSSCKDWNEACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERIILAHHSSVEPRQEAVTEYRVLGPQINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIVKFMHVLNNSSEELRTSLREQPDVLRFVATMPSHMRISWNLMSSYLV*






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