SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.17g200200

Feature Type:gene_model
Chromosome:Gm17
Start:31711887
stop:31714952
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.17g200200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G31420.1AT JGI N/AIEA
K14816KEGG Ribosome biogenesis JGI N/AIEA
KOG2785 KOG C2H2-type Zn-finger protein JGI N/AIEA
PTHR13182PantherFam ZINC FINGER PROTEIN 622 JGI N/AIEA
PF12756Pfam C2H2 type zinc-finger (2 copies) JGI N/AIEA

Gene model name correspondences to Glyma.17g200200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma17g29490 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.17g200200
>Glyma.17g200200.1 sequence-type=CDS polypeptide=Glyma.17g200200.1.p locus=Glyma.17g200200 id=Glyma.17g200200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCGGGGTTAACGTGCAACGCTTGCAACACCGAATTCAAAGATGACACAGAGCAAAAGCTCCATTACAAATCCGAGTGGCATCGATACAATCTCAAGCGCAAGGTGGCTGGGGTTCCTGGGGTGACCGAAGCGCTATTTCTGGCTAGACAATCTGTGCTTGCTCAAGAGAAAAATAAACTGGGTGAAACCCCCATGCTCTACACCTGTGGTCTTTGTGGAAAGGATTATAAAAGTTCTAAGGCTCATGCTGAGCACCTTAAATCACGTGGTCATATGATGCGGGCCTCTGAAGGAACTAGTCACGCAGATGAGAAGGCAATAGTTAAGCCTCTTCCACAACGTGTTGTGAATAGGCCTCCTCCTAGGAGAGAGGTAGATAACTCTGAAAATGAGGAAAGTGAAGATGAATGGGAGGAGGTTGATCCTGAAGAGGATTTGGTTGACGGTGCTGCAAAGTCCTTGACTGATTTGAATGTGAATGAGCATGGTGAAAATGTTGATATGGAGGTAGATGATGATTTTGAGGAGTTAGACCCCTCTTGTTGCTTTATGTGTGATCAAGAGCACAAAACAATAGAAAACTGCATGGTTCACATGCACAAGCATCATGGGTTCTTCATTCCAGATGTTGAGTATTTGAAGGATCCAAAAGGCCTCCTCACCTATCTTGGCCTTAAGGTCAAAAGGGACTACATGTGTCTGTACTGCAATGATCGATGTTATCCATTCAGCAGCTTGGAAGCAGTCAGGAAACATATGGAGGCAAAAAGTCACTGTAAAGTGCATTATGGTGATGGTGTTGATGACGAGGAGGTAGAATTAGAAGAATTCTATGATTATAGCAGCAGCTATGTGGATGATCAAGGCAAGCAGCTTGTTGCATCTTGTGATGCATCTAACAATGTAGAACTTGTTGGTGGGTCCGAGCTCATAATCAGCAGGAAATCTGGTGATAGATCATCAACCAAAACACTTGGTTCCCGTGAATTTTTGCGTTATTATCGTCAGAAACCTCGGCCATCACTAGCAAATATGGCTATCACTGCTGCGTTGGCTTCAAGGTACAGGAGCATGGGCTTGACCACTATCCAATCAAGGGAGAAGATTGTGAGGATGAAAGTGCTGAAGGAAATGAATAGGTCAGGTGTGGACAATATGCGTACCAAGATGGCGATGAAGAGTAATGTCATCAGGAACCTGCCAAAGAATGTACCATATTAG

>Glyma.17g200200.3 sequence-type=CDS polypeptide=Glyma.17g200200.3.p locus=Glyma.17g200200 id=Glyma.17g200200.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCGGGGTTAACGTGCAACGCTTGCAACACCGAATTCAAAGATGACACAGAGCAAAAGCTCCATTACAAATCCGAGTGGCATCGATACAATCTCAAGCGCAAGGTGGCTGGGGTTCCTGGGGTGACCGAAGCGCTATTTCTGGCTAGACAATCTGTGCTTGCTCAAGAGAAAAATAAACTGGGTGAAACCCCCATGCTCTACACCTGTGGTCTTTGTGGAAAGGATTATAAAAGTTCTAAGGCTCATGCTGAGCACCTTAAATCACGTGGTCATATGATGCGGGCCTCTGAAGGAACTAGTCACGCAGATGAGAAGGCAATAGTTAAGCCTCTTCCACAACGTGTTGTGAATAGGCCTCCTCCTAGGAGAGAGGATTTGGTTGACGGTGCTGCAAAGTCCTTGACTGATTTGAATGTGAATGAGCATGGTGAAAATGTTGATATGGAGGTAGATGATGATTTTGAGGAGTTAGACCCCTCTTGTTGCTTTATGTGTGATCAAGAGCACAAAACAATAGAAAACTGCATGGTTCACATGCACAAGCATCATGGGTTCTTCATTCCAGATGTTGAGTATTTGAAGGATCCAAAAGGCCTCCTCACCTATCTTGGCCTTAAGGTCAAAAGGGACTACATGTGTCTGTACTGCAATGATCGATGTTATCCATTCAGCAGCTTGGAAGCAGTCAGGAAACATATGGAGGCAAAAAGTCACTGTAAAGTGCATTATGGTGATGGTGTTGATGACGAGGAGGTAGAATTAGAAGAATTCTATGATTATAGCAGCAGCTATGTGGATGATCAAGGCAAGCAGCTTGTTGCATCTTGTGATGCATCTAACAATGTAGAACTTGTTGGTGGGTCCGAGCTCATAATCAGCAGGAAATCTGGTGATAGATCATCAACCAAAACACTTGGTTCCCGTGAATTTTTGCGTTATTATCGTCAGAAACCTCGGCCATCACTAGCAAATATGGCTATCACTGCTGCGTTGGCTTCAAGGTACAGGAGCATGGGCTTGACCACTATCCAATCAAGGGAGAAGATTGTGAGGATGAAAGTGCTGAAGGAAATGAATAGGTCAGGTGTGGACAATATGCGTACCAAGATGGCGATGAAGAGTAATGTCATCAGGAACCTGCCAAAGAATGTACCATATTAG
Predicted protein sequences of Glyma.17g200200
>Glyma.17g200200.1.p sequence-type=predicted peptide transcript=Glyma.17g200200.1 locus=Glyma.17g200200 id=Glyma.17g200200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPGLTCNACNTEFKDDTEQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSVLAQEKNKLGETPMLYTCGLCGKDYKSSKAHAEHLKSRGHMMRASEGTSHADEKAIVKPLPQRVVNRPPPRREVDNSENEESEDEWEEVDPEEDLVDGAAKSLTDLNVNEHGENVDMEVDDDFEELDPSCCFMCDQEHKTIENCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKVKRDYMCLYCNDRCYPFSSLEAVRKHMEAKSHCKVHYGDGVDDEEVELEEFYDYSSSYVDDQGKQLVASCDASNNVELVGGSELIISRKSGDRSSTKTLGSREFLRYYRQKPRPSLANMAITAALASRYRSMGLTTIQSREKIVRMKVLKEMNRSGVDNMRTKMAMKSNVIRNLPKNVPY*

>Glyma.17g200200.3.p sequence-type=predicted peptide transcript=Glyma.17g200200.3 locus=Glyma.17g200200 id=Glyma.17g200200.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPGLTCNACNTEFKDDTEQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSVLAQEKNKLGETPMLYTCGLCGKDYKSSKAHAEHLKSRGHMMRASEGTSHADEKAIVKPLPQRVVNRPPPRREDLVDGAAKSLTDLNVNEHGENVDMEVDDDFEELDPSCCFMCDQEHKTIENCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKVKRDYMCLYCNDRCYPFSSLEAVRKHMEAKSHCKVHYGDGVDDEEVELEEFYDYSSSYVDDQGKQLVASCDASNNVELVGGSELIISRKSGDRSSTKTLGSREFLRYYRQKPRPSLANMAITAALASRYRSMGLTTIQSREKIVRMKVLKEMNRSGVDNMRTKMAMKSNVIRNLPKNVPY*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo