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Report for Sequence Feature Glyma.17g196800

Feature Type:gene_model
Chromosome:Gm17
Start:30689303
stop:30693148
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.17g196800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G31580.2AT RSZP22,SRZ-22,SRZ22 JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
K12896KEGG Spliceosome JGI N/AIEA
KOG0107 KOG Alternative splicing factor SRp20/9G8 (RRM superfamily) JGI N/AIEA
PTHR24012PantherFam RNA BINDING PROTEIN JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF00098Pfam Zinc knuckle JGI N/AIEA

Gene model name correspondences to Glyma.17g196800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma17g29080 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.17g196800
>Glyma.17g196800.1 sequence-type=CDS polypeptide=Glyma.17g196800.1.p locus=Glyma.17g196800 id=Glyma.17g196800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAGTCACCGAGAGAGATCTCGAAGACGAATTCCGTGTTTTCGGAGTTATTCGGAGTGTTTGGGTTGCACGTAGACCACCTGGTTATGCTTTTATTGACTTTGATGACCGCAGAGATGCACAGGATGCTATCCGTGAATTGGATGGCAAGAATGGTTGGAGGGTTGAGCTTTCTCACAACTCTAGAGGTGGAGGTGGTGGTCGTGGTGGTCGCTCTGGTGGTTCTGATTTGAAATGTTACGAGTGTGGTGAACCTGGTCATTTTGCTCGTGAATGTCGCATGCGTGGTGGTTCAGGAAGACGCCGTAGCCGTAGTCCACCCAGATTCCGTAGGAGCCCAAGTTATGGGCGAAGGAGTTACAGTCCTCGTGGGCGGTCCCCTAGGCGCCGTAGTTTGTCACCTCGTGGACGTAGCTACAGCAGGTCACCTCCTTATCGTGGGCGTGAGGAGGTCCCATATGCTAATGGAAATGGCCTTAGGGAACGACGCAGAAGCAGAAGTTGA

>Glyma.17g196800.2 sequence-type=CDS polypeptide=Glyma.17g196800.2.p locus=Glyma.17g196800 id=Glyma.17g196800.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCTCGCGTGTATGTTGGTAACTTGGATTCACGAGTCACCGAGAGAGATCTCGAAGACGAATTCCGTGTTTTCGGAGTTATTCGGAGTGTTTGGGTTGCACGTAGACCACCTGGTTATGCTTTTATTGACTTTGATGACCGCAGAGATGCACAGGATGCTATCCGTGAATTGGATGGCAAGAATGGTTGGAGGGTTGAGCTTTCTCACAACTCTAGAGGTGGAGGTGGTGGTCGTGGTGGTCGCTCTGGTGGTTCTGATTTGAAATGTTACGAGTGTGGTGAACCTGGTCATTTTGCTCGTGAATGTCGCATGCGTGGTGGTTCAGGAAGACGCCGTAGCCGTAGTCCACCCAGATTCCGTAGGAGCCCAAGTTATGGGCGAAGTCCTCGTGGGCGGTCCCCTAGGCGCCGTAGTTTGTCACCTCGTGGACGTAGCTACAGCAGGTCACCTCCTTATCGTGGGCGTGAGGAGGTCCCATATGCTAATGGAAATGGCCTTAGGGAACGACGCAGAAGCAGAAGTTGA
Predicted protein sequences of Glyma.17g196800
>Glyma.17g196800.1.p sequence-type=predicted peptide transcript=Glyma.17g196800.1 locus=Glyma.17g196800 id=Glyma.17g196800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDGKNGWRVELSHNSRGGGGGRGGRSGGSDLKCYECGEPGHFARECRMRGGSGRRRSRSPPRFRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREEVPYANGNGLRERRRSRS*

>Glyma.17g196800.2.p sequence-type=predicted peptide transcript=Glyma.17g196800.2 locus=Glyma.17g196800 id=Glyma.17g196800.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDGKNGWRVELSHNSRGGGGGRGGRSGGSDLKCYECGEPGHFARECRMRGGSGRRRSRSPPRFRRSPSYGRSPRGRSPRRRSLSPRGRSYSRSPPYRGREEVPYANGNGLRERRRSRS*






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