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Report for Sequence Feature Glyma.17g190500

Feature Type:gene_model
Chromosome:Gm17
Start:26584437
stop:26593274
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.17g190500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G32720.2AT AtLa1,La1 JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
K11090KEGG Systemic lupus erythematosus JGI N/AIEA
KOG4213 KOG RNA-binding protein La JGI N/AIEA
PTHR22792PantherFam LUPUS LA PROTEIN-RELATED JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF05383Pfam La domain JGI N/AIEA
PF08777Pfam RNA binding motif JGI N/AIEA

Gene model name correspondences to Glyma.17g190500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma17g26021 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.17g190500
>Glyma.17g190500.1 sequence-type=CDS polypeptide=Glyma.17g190500.1.p locus=Glyma.17g190500 id=Glyma.17g190500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCGACCGCGTCACTGGACGAGGAAACCGCAAAGAAAGTCGTACGACAGGTGGAGTTCTATTTCAGTGATAGCAACCTTCCCAGAGACAATTTTCTCAGGAAAACCGTCACCGAAAGCGAAGATGGCATGGTTAGTTTGGCTTTGATTTGCTCTTTTAATCGGATGCGAACCAATCTTAATCTGGGGGATGTTAAGCTGGACGGGGTGACCAAAGATACTGTTAAAGCTGTTGCTCAAGCTTTGAAAAATTCGGCTTTGGTCAGAGTCTCTGAAGATGGGACCAAAGTTGGCAGGGCAACTGAACTTCTGAAGCCAGAAGAGGTAATTGAGCAGGTAGAGATAAGAACAATTGCTGCATTGCCATTTGAATATGATGTGAAGCTTGAAGATGTGGAGACATTCTTTGCTCAATATGCCAAGGTTAATAGTGTTCGGTTGCCTCGCCATGTTGGAGACAAAAAGTTCTTTTGTGGCACTGCCCTTGTTGAGTTCTCATCAGATGAAGAAACGGAAAAAGTTTTGAAGCAAAGTCTGGTCTATGCAGGGGCTGAGCTACAATTAAAGCTAAAGAAGGACTTTGATGCACAAAGAGAAAAGGAATTAGAAGAGCAAGAAAAATTCCGGCCACCTTTGGGTTCAGGTCACCAGAATAACACAAATACAGAAGCAAACTACCCTAAAGGCTTACTTATAGCCTTCAAACTAAAGAGCATTTCTGATCAAGTTCCTTTGGATCAAAATAACATTGATCAGCAAGCCAATGACAGTAATGTTGTGAAGGATAATGCTGACAATGATAAAGAAAACAATGGAGTGAGTGAAGGAAAAGACACAGAAGGTGAAGAAAAGAGCAAAGAAACTGATGGAAAAAATTATGCTGCTGCTTACAAGGACAACAATGATGTTGTCTCACGTGAGGATTTAAAGGGTGTCTTTGAGAAGTTTGGTACTGTGAAGTACATTGATTTCAAGATTGGAGAAGAGTCAGGATACATTCAATTTGAAGAACCTGAAGCTGCTCAGAAAGCTCGTGCTGCTGCAGTTCTTTCTGAAAAGGAGGGCTTAGTTGTGAAAAATTATATTGCTACTCTAGATCCAGTAACTGGTGAGGCTGAGAGAGAATACTGGACCCTGCTTCGTGGTAATCAGGGAAAGATCCGAGGATGCACAAATAACCGAGGAAGGGGTGGAAAACATGGTAGAGGGGGCAAATACTCCAGGTCCAGAGAGAATGAATCTGCAGTAGATCGCCCAAACAAAGTTAGAAAGTCATAG

>Glyma.17g190500.2 sequence-type=CDS polypeptide=Glyma.17g190500.2.p locus=Glyma.17g190500 id=Glyma.17g190500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCGACCGCGTCACTGGACGAGGAAACCGCAAAGAAAGTCGTACGACAGGTGGAGTTCTATTTCAGTGATAGCAACCTTCCCAGAGACAATTTTCTCAGGAAAACCGTCACCGAAAGCGAAGATGGCATGGTTAGTTTGGCTTTGATTTGCTCTTTTAATCGGATGCGAACCAATCTTAATCTGGGGGATGTTAAGCTGGACGGGGTGACCAAAGATACTGTTAAAGCTGTTGCTCAAGCTTTGAAAAATTCGGCTTTGGTCAGAGTCTCTGAAGATGGGACCAAAGTTGGCAGGGCAACTGAACTTCTGAAGCCAGAAGAGGTAATTGAGCAGGTAGAGATAAGAACAATTGCTGCATTGCCATTTGAATATGATGTGAAGCTTGAAGATGTGGAGACATTCTTTGCTCAATATGCCAAGGTTAATAGTGTTCGGTTGCCTCGCCATGTTGGAGACAAAAAGTTCTTTTGTGGCACTGCCCTTGTTGAGTTCTCATCAGATGAAGAAACGGAAAAAGTTTTGAAGCAAAGTCTGGTCTATGCAGGGGCTGAGCTACAATTAAAGCTAAAGAAGGACTTTGATGCACAAAGAGAAAAGGAATTAGAAGAGCAAGAAAAATTCCGGCCACCTTTGGGTTCAGGTCACCAGAATAACACAAATACAGAAGCAAACTACCCTAAAGGCTTACTTATAGCCTTCAAACTAAAGAGCATTTCTGATCAAGTTCCTTTGGATCAAAATAACATTGATCAGCAAGCCAATGACAGTAATGTTGTGAAGGATAATGCTGACAATGATAAAGAAAACAATGGAGTGAGTGAAGGAAAAGACACAGAAGGTGAAGAAAAGAGCAAAGAAACTGATGGAAAAAATTATGCTGCTGCTTACAAGGACAACAATGATGTTGTCTCACGTGAGGATTTAAAGGGTGTCTTTGAGAAGTTTGGTACTGTGAAGTACATTGATTTCAAGATTGGAGAAGAGTCAGGATACATTCAATTTGAAGAACCTGAAGCTGCTCAGAAAGCTCGTGCTGCTGCAGTTCTTTCTGAAAAGGAGGGCTTAGTTGTGAAAAATTATATTGCTACTCTAGATCCAGTAACTGGTGAGGCTGAGAGAGAATACTGGACCCTGCTTCGTGGTAATCAGGGAAAGATCCGAGGATGCACAAATAACCGAGGAAGAACGAAGAAATGGATGGAGATATATATAATGAAGATACAAATGATGAAGATATAG
Predicted protein sequences of Glyma.17g190500
>Glyma.17g190500.1.p sequence-type=predicted peptide transcript=Glyma.17g190500.1 locus=Glyma.17g190500 id=Glyma.17g190500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSTASLDEETAKKVVRQVEFYFSDSNLPRDNFLRKTVTESEDGMVSLALICSFNRMRTNLNLGDVKLDGVTKDTVKAVAQALKNSALVRVSEDGTKVGRATELLKPEEVIEQVEIRTIAALPFEYDVKLEDVETFFAQYAKVNSVRLPRHVGDKKFFCGTALVEFSSDEETEKVLKQSLVYAGAELQLKLKKDFDAQREKELEEQEKFRPPLGSGHQNNTNTEANYPKGLLIAFKLKSISDQVPLDQNNIDQQANDSNVVKDNADNDKENNGVSEGKDTEGEEKSKETDGKNYAAAYKDNNDVVSREDLKGVFEKFGTVKYIDFKIGEESGYIQFEEPEAAQKARAAAVLSEKEGLVVKNYIATLDPVTGEAEREYWTLLRGNQGKIRGCTNNRGRGGKHGRGGKYSRSRENESAVDRPNKVRKS*

>Glyma.17g190500.2.p sequence-type=predicted peptide transcript=Glyma.17g190500.2 locus=Glyma.17g190500 id=Glyma.17g190500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSTASLDEETAKKVVRQVEFYFSDSNLPRDNFLRKTVTESEDGMVSLALICSFNRMRTNLNLGDVKLDGVTKDTVKAVAQALKNSALVRVSEDGTKVGRATELLKPEEVIEQVEIRTIAALPFEYDVKLEDVETFFAQYAKVNSVRLPRHVGDKKFFCGTALVEFSSDEETEKVLKQSLVYAGAELQLKLKKDFDAQREKELEEQEKFRPPLGSGHQNNTNTEANYPKGLLIAFKLKSISDQVPLDQNNIDQQANDSNVVKDNADNDKENNGVSEGKDTEGEEKSKETDGKNYAAAYKDNNDVVSREDLKGVFEKFGTVKYIDFKIGEESGYIQFEEPEAAQKARAAAVLSEKEGLVVKNYIATLDPVTGEAEREYWTLLRGNQGKIRGCTNNRGRTKKWMEIYIMKIQMMKI*






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