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Report for Sequence Feature Glyma.17g187400

Feature Type:gene_model
Chromosome:Gm17
Start:24093146
stop:24104562
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.17g187400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G35910.1AT JGI N/AIEA
3.1.13.5EC ribonuclease D JGI N/AIEA
GO:0006139GO-bp nucleobase-containing compound metabolic process JGI N/AIEA
GO:0006396GO-bp RNA processing JGI N/AIEA
GO:0000176GO-cc nuclear exosome (RNase complex) JGI N/AIEA
GO:0005622GO-cc intracellular anatomical structure JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0008408GO-mf 3'-5' exonuclease activity JGI N/AIEA
K12591KEGG Messenger RNA biogenesis JGI N/AIEA
KOG2206 KOG Exosome 3'-5' exoribonuclease complex, subunit PM/SCL-100 (Rrp6) JGI N/AIEA
PTHR12124PantherFam POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED JGI N/AIEA
PTHR12124:SF47PantherFam EXOSOME COMPONENT 10 JGI N/AIEA
PF00570Pfam HRDC domain JGI N/AIEA
PF01612Pfam 3'-5' exonuclease JGI N/AIEA
PF08066Pfam PMC2NT (NUC016) domain JGI N/AIEA

Gene model name correspondences to Glyma.17g187400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma17g24130 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.17g187400
>Glyma.17g187400.1 sequence-type=CDS polypeptide=Glyma.17g187400.1.p locus=Glyma.17g187400 id=Glyma.17g187400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAACGTGGATCACGATCAGCCTCCCTCGGCGACGAAGGCCCAGGCGCTGCAGACCCTAACGGCGGGTCCTCTATCGTCGTCGGTGGCGAAGCTCGCTGCGTCCTCGCGGTGCATCCCTTCCGACAAGGACTTCCACTTCTACCGCAACTTCGAGGAGTTCAAGGTCCCCGTCGAGGAAATCGCTCGGGAGTCGCGGTCGATGCTCGAGGCCATCGGCGCTGCGGCAGCGCATGCGGCGTTCCCTGACAACGACGTCGACGACGACGCCGCATACGACTGGCTGGTAAACGCGAATGACGACGTTTTGGAGCGGTTCGACGCGTCGGTGGACGAGTTCCGGAAGGTTCGGCAGGAGGAAGAGGAGACTGGGCGTCCGGCGATGCATCCGATGGAGGAAGATGGGTTTCAATTGGTGACGGGGAAGAAGAAGAAAGGGGGGAAAGGGAATGTGACTCCGGCAGCGACGGGTTCTGAGGTGGCGGCAGTGGCGCCACCGGGAGTTACGGTGGCAACTAAGGATAAGAAGACGATGGGGCCGAAGTCGAAGGTTCCGTTTCATATACCAACGATTAGGAGGCCGCAGGATGAGTATAATATAGTGGTTAATAATGCAAACATGCCGTTTGAGCATGTTTGGTTGCAGAGGAGTGATGATGGGTTGAGCTTCATTCATCCACTGGAAAAGCTATCTGTTTTGAATTTTGTTGATACAAATCTTGGGGATGTTGTGCCTGTGAAGCCTCCCTCGATAGAAAGCACCCCTTTTAAGCTCGTTGAGGAAGTCAAAGATTTAAAGGAGTTGGCGGCTAAGCTGCGTTCTGTTAATGAGTTTGCTGTTGATTTGGAACATAATCAATATCGGTCTTTCCAAGGTTTGACTTGCCTGATGCAAATTTCAACAAGGACTGAAGATTTTATTGTTGACACATTGAAACTTCGCATTCATATTGGACCCTATCTAAGGGAAATCTTCAAGGACCCTGCCAAGAGGAAGGTCATGCATGGTGCGGATCGAGATATTGCATGGCTTCAACGAGACTTTGGAATTTACATTTGTAATTTGTTTGACACTCACCAGGCTTCAAAGTTGTTAAACTTGGAGAGAAATAGTTTGGAGCATATTCTACATCATTTTTGTGAAGTTACTGCAAACAAAGAATACCAGAATGCAGACTGGAGACTACGTCCACTTCCTGATGAGATGATAAGATATGCCAGAGAAGATACACACTATCTGTTGTATATATACGACTTAATGAGGATTAAGTTATTTGCCTTGTCTAAGGAGTCTGAAAGTTCTGAGTCTTCAGACACTCCTCTGGTGGAGGTCTACAAACGCAGTTATGATGTCTGCATTCAGCTATATGAGAAAGAACTTTTGACAGAGAACTCCTATCTTCATATATATGGGTTGCAAGGGGCCGGTTTCAATGCTCAGCAGCTTGCCATTGTTTCTGGGCTGTGTGAATGGAGGGACATTGTTGCCCGTGCAGAGGATGAAAGTACAGGATATGTATTGCCAAATAAATCTGTTCTTGAAATCGCTAAGCAGATGCCTCTTACTACAAGCAAGCTACGGCGATTGGTGAAGTCAAAACACCCTTATGTTGAACACAATCTTGATACTGTTGTCAGCATCATTAGGCATTCAATCCAGAATGCTGCTTCATTTGAGGAAGCTGCTCAACAGTTGAAAGAAGCACAAGCTGTCACTGCATCAGATGTAGTACCTGTTACAGATGGAACTGAAGATCCCCCATCTCATACACGGCATTCTAAGGAATCTTCTCAGCATCAAGCTACAAGTGTACCAATAAAAATTAAGTCCAATAGTCTTATTTTTGAGCCACCAAAGGATAGTCTCACAATTGCAGAGCAGAATAGGGATGCAAATGTTGGTGCACTTTCTACAGCAAAGGGGAATGGAGCAGCTGTTCAGGTGCTTAAAAAGCCTACTGGTGCTTTTGGGGCACTCCTGGGGAGTTCTGCTTCAAAGAGGAAGCTTGGTCCTGGTAAGGGCAAGGAAGAGATCAAGCTAGAGCAGATTAGATCTTCTGTCAGTCTTCCTTTCCATTCATTTTTGGGTAGCAGTGAAAAGTCAGAACCTACAGAAGAAATTCCTAGTGTAGCATCTGAAATGTCAGAACCGCAGAAACCTGTTTCTGATGTAGTTTCTGCCTCTCCAGTAGATGAGATTATAATGCTAGAATCAGATACGGGTGCAAAGGATATGGAGCAGAATAACCTAGAAAACTCCAATGAACACAGGGAGAAAGATTCTGTTGTGTCCACTTCGGGAAAAGAGGATGAAGATGAGCCAGTATCACTGTCAGAATTGTCATCGAATTTAAAAAAATGCTTTCATTCAAATGATCAAAATAATAAAATCAGACAGCCCAAGAAAACTGAACAGCCCAGTGGCTTAGTGCAGCTGAAGCCATTTGATTATGAAGCTGCAAGGAAACATGTTAAGTTTGGAGAACATAAAAAGCATGCATCTTCCAAGGGTTCCGATGGTCATATGGAGGTAGTAGAGGACTCCGGTAGCAAGAAGCAGCGTTCGACAACAGGACAGGGACAAGCTAGTGATTTGAGTAAACAATTGCCACAAGGTAGAAGACGTCAGGCGTTTCCTGCTTCTGGGAATCGTAGTTCAACATTCCGCTGA

>Glyma.17g187400.2 sequence-type=CDS polypeptide=Glyma.17g187400.2.p locus=Glyma.17g187400 id=Glyma.17g187400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAACGTGGATCACGATCAGCCTCCCTCGGCGACGAAGGCCCAGGCGCTGCAGACCCTAACGGCGGGTCCTCTATCGTCGTCGGTGGCGAAGCTCGCTGCGTCCTCGCGGTGCATCCCTTCCGACAAGGACTTCCACTTCTACCGCAACTTCGAGGAGTTCAAGGTCCCCGTCGAGGAAATCGCTCGGGAGTCGCGGTCGATGCTCGAGGCCATCGGCGCTGCGGCAGCGCATGCGGCGTTCCCTGACAACGACGTCGACGACGACGCCGCATACGACTGGCTGGTAAACGCGAATGACGACGTTTTGGAGCGGTTCGACGCGTCGGTGGACGAGTTCCGGAAGGTTCGGCAGGAGGAAGAGGAGACTGGGCGTCCGGCGATGCATCCGATGGAGGAAGATGGGTTTCAATTGGTGACGGGGAAGAAGAAGAAAGGGGGGAAAGGGAATGTGACTCCGGCAGCGACGGGTTCTGAGGTGGCGGCAGTGGCGCCACCGGGAGTTACGGTGGCAACTAAGGATAAGAAGACGATGGGGCCGAAGTCGAAGGTTCCGTTTCATATACCAACGATTAGGAGGCCGCAGGATGAGTATAATATAGTGGTTAATAATGCAAACATGCCGTTTGAGCATGTTTGGTTGCAGAGGAGTGATGATGGGTTGAGCTTCATTCATCCACTGGAAAAGCTATCTGTTTTGAATTTTGTTGATACAAATCTTGGGGATGTTGTGCCTGTGAAGCCTCCCTCGATAGAAAGCACCCCTTTTAAGCTCGTTGAGGAAGTCAAAGATTTAAAGGAGTTGGCGGCTAAGCTGCGTTCTGTTAATGAGTTTGCTGTTGATTTGGAACATAATCAATATCGGTCTTTCCAAGGTTTGACTTGCCTGATGCAAATTTCAACAAGGACTGAAGATTTTATTGTTGACACATTGAAACTTCGCATTCATATTGGACCCTATCTAAGGGAAATCTTCAAGGACCCTGCCAAGAGGAAGGTCATGCATGGTGCGGATCGAGATATTGCATGGCTTCAACGAGACTTTGGAATTTACATTTGTAATTTGTTTGACACTCACCAGGCTTCAAAGTTGTTAAACTTGGAGAGAAATAGTTTGGAGCATATTCTACATCATTTTTGTGAAGTTACTGCAAACAAAGAATACCAGAATGCAGACTGGAGACTACGTCCACTTCCTGATGAGATGATAAGATATGCCAGAGAAGATACACACTATCTGTTGTATATATACGACTTAATGAGGATTAAGTTATTTGCCTTGTCTAAGGAGTCTGAAAGTTCTGAGTCTTCAGACACTCCTCTGGTGGAGGTCTACAAACGCAGTTATGATGTCTGCATTCAGCTATATGAGAAAGAACTTTTGACAGAGAACTCCTATCTTCATATATATGGGTTGCAAGGGGCCGGTTTCAATGCTCAGCAGCTTGCCATTGTTTCTGGGCTGTGTGAATGGAGGGACATTGTTGCCCGTGCAGAGGATGAAAGTACAGGATATGTATTGCCAAATAAATCTGTTCTTGAAATCGCTAAGCAGATGCCTCTTACTACAAGCAAGCTACGGCGATTGGTGAAGTCAAAACACCCTTATGTTGAACACAATCTTGATACTGTTGTCAGCATCATTAGGCATTCAATCCAGAATGCTGCTTCATTTGAGGAAGCTGCTCAACAGTTGAAAGAAGCACAAGCTGTCACTGCATCAGATGTAGTACCTGTTACAGATGGAACTGAAGATCCCCCATCTCATACACGGCATTCTAAGGAATCTTCTCAGCATCAAGCTACAAGTGTACCAATAAAAATTAAGTCCAATAGTCTTATTTTTGAGCCACCAAAGGATAGTCTCACAATTGCAGAGCAGAATAGGGATGCAAATGTTGGTGCACTTTCTACAGCAAAGGGGAATGGAGCAGCTGTTCAGGTGCTTAAAAAGCCTACTGGTGCTTTTGGGGCACTCCTGGGGAGTTCTGCTTCAAAGAGGAAGCTTGGTCCTGGGCAAGGAAGAGATCAAGCTAGAGCAGATTAG
Predicted protein sequences of Glyma.17g187400
>Glyma.17g187400.1.p sequence-type=predicted peptide transcript=Glyma.17g187400.1 locus=Glyma.17g187400 id=Glyma.17g187400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNVDHDQPPSATKAQALQTLTAGPLSSSVAKLAASSRCIPSDKDFHFYRNFEEFKVPVEEIARESRSMLEAIGAAAAHAAFPDNDVDDDAAYDWLVNANDDVLERFDASVDEFRKVRQEEEETGRPAMHPMEEDGFQLVTGKKKKGGKGNVTPAATGSEVAAVAPPGVTVATKDKKTMGPKSKVPFHIPTIRRPQDEYNIVVNNANMPFEHVWLQRSDDGLSFIHPLEKLSVLNFVDTNLGDVVPVKPPSIESTPFKLVEEVKDLKELAAKLRSVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFIVDTLKLRIHIGPYLREIFKDPAKRKVMHGADRDIAWLQRDFGIYICNLFDTHQASKLLNLERNSLEHILHHFCEVTANKEYQNADWRLRPLPDEMIRYAREDTHYLLYIYDLMRIKLFALSKESESSESSDTPLVEVYKRSYDVCIQLYEKELLTENSYLHIYGLQGAGFNAQQLAIVSGLCEWRDIVARAEDESTGYVLPNKSVLEIAKQMPLTTSKLRRLVKSKHPYVEHNLDTVVSIIRHSIQNAASFEEAAQQLKEAQAVTASDVVPVTDGTEDPPSHTRHSKESSQHQATSVPIKIKSNSLIFEPPKDSLTIAEQNRDANVGALSTAKGNGAAVQVLKKPTGAFGALLGSSASKRKLGPGKGKEEIKLEQIRSSVSLPFHSFLGSSEKSEPTEEIPSVASEMSEPQKPVSDVVSASPVDEIIMLESDTGAKDMEQNNLENSNEHREKDSVVSTSGKEDEDEPVSLSELSSNLKKCFHSNDQNNKIRQPKKTEQPSGLVQLKPFDYEAARKHVKFGEHKKHASSKGSDGHMEVVEDSGSKKQRSTTGQGQASDLSKQLPQGRRRQAFPASGNRSSTFR*

>Glyma.17g187400.2.p sequence-type=predicted peptide transcript=Glyma.17g187400.2 locus=Glyma.17g187400 id=Glyma.17g187400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNVDHDQPPSATKAQALQTLTAGPLSSSVAKLAASSRCIPSDKDFHFYRNFEEFKVPVEEIARESRSMLEAIGAAAAHAAFPDNDVDDDAAYDWLVNANDDVLERFDASVDEFRKVRQEEEETGRPAMHPMEEDGFQLVTGKKKKGGKGNVTPAATGSEVAAVAPPGVTVATKDKKTMGPKSKVPFHIPTIRRPQDEYNIVVNNANMPFEHVWLQRSDDGLSFIHPLEKLSVLNFVDTNLGDVVPVKPPSIESTPFKLVEEVKDLKELAAKLRSVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFIVDTLKLRIHIGPYLREIFKDPAKRKVMHGADRDIAWLQRDFGIYICNLFDTHQASKLLNLERNSLEHILHHFCEVTANKEYQNADWRLRPLPDEMIRYAREDTHYLLYIYDLMRIKLFALSKESESSESSDTPLVEVYKRSYDVCIQLYEKELLTENSYLHIYGLQGAGFNAQQLAIVSGLCEWRDIVARAEDESTGYVLPNKSVLEIAKQMPLTTSKLRRLVKSKHPYVEHNLDTVVSIIRHSIQNAASFEEAAQQLKEAQAVTASDVVPVTDGTEDPPSHTRHSKESSQHQATSVPIKIKSNSLIFEPPKDSLTIAEQNRDANVGALSTAKGNGAAVQVLKKPTGAFGALLGSSASKRKLGPGQGRDQARAD*






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