SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.17g184900

Feature Type:gene_model
Chromosome:Gm17
Start:23608398
stop:23615300
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.17g184900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G17920.1AT ATCIMS,ATMETS,ATMS1 JGI N/AIEA
2.1.1.14EC 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase JGI N/AIEA
GO:0008652GO-bp cellular amino acid biosynthetic process JGI N/AIEA
GO:0009086GO-bp methionine biosynthetic process JGI N/AIEA
GO:0003871GO-mf 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity JGI N/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
K00549KEGG Selenocompound metabolism JGI N/AIEA
PTHR30519PantherFam 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE JGI N/AIEA
PTHR30519:SF0PantherFam 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE JGI N/AIEA
PF01717Pfam Cobalamin-independent synthase, Catalytic domain JGI N/AIEA
PF08267Pfam Cobalamin-independent synthase, N-terminal domain JGI N/AIEA

Gene model name correspondences to Glyma.17g184900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma17g23730 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.17g184900
>Glyma.17g184900.1 sequence-type=CDS polypeptide=Glyma.17g184900.1.p locus=Glyma.17g184900 id=Glyma.17g184900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTCTCATATTGTTGGATACCCCCGCATGGGCCCCAAGAGAGAGCTGAAGTTTGCATTGGAGTCATTCTGGGATGGAAAGAGCAGTGCCGATGATTTGAAGAAGGTGGCTTCTGATCTCAGGGCGTCCATTTGGAAGCAGATGATTGATGCTGGGATCAAGTACATCCCCAGCAACACTTTCTCATACTACGATCAGGTGCTTGATACTACCGCCATGCTTGGCGCCGTTCCACCCAGATATGGATGGAACGGCGAAGAGATAGGATTTGATACCTTTTTCTCCATGGCCAGAGGTAATGCATCTGTGCCTGCCATGGAGATGACCAAGTGGTTTGACACCAACTACCACTTTATTGTCCCCGAGTTGGGACCTGATGTGAATTTCAGTTATGCTTCCCACAAGGCAGTGAATGAGTACAAGGAAGCCAAGGCGCTTGGAGTAGATACAGTTCCAGTCCTCATTGGCCCTGTATCATACTTGGTGCTCTCCAAACCTGCCAAGGGTGTTGATAAGTCGTTTTGTCTTCTTTCTCTCCTCCCAAAAGTCCTTGCTATCTATAAGGAAGTTGTGGCTGATCTTAAGCAAGCTGGTGCTTCGTGGATTCAATTTGACGAACCTATCCTTGTCTTGGACCTTGGCTCTCAAACGTTGCAAGCACTTACTGCAGCATACGCAGAACTTGAATCTACTCTATCGGGTTTAAATGTTCTTATTGAGACCTACTTTGCTGACATTCCTGCGGAGGCATACCAGACCCTCACAGCTCTTAATGGAGTTGCAGCATTTGGATTTGATTTAGTCCGTGGAACTAAGACTCTTGATCTAATCAAGGGTGGATTTCCCAGTGGAAAATACTTGTTTGCTGGCGTGGTGGATGGAAGGAACATCTGGGCTAATAATCTCACTGCTTCTCTTGATACATTAAATAGTCTTGAGGGAATTGTGGGAAAAGATAAACTTGTTGTGTCCACCTCCTGCTCACTTCTTCACACTGCTGTTGATCTTGTTAATGAAACCAAGTTGGATAATGAGATAAAATCATGGCTGGCTTTTGCTGCCCAAAAAATTGTTGAAGTAAATGCATTGGCCAAGGCATTGTCTGGTCAAAAGGATGAGGCCTTTTTCTCTTCTAATGCTGATGCTCAGGCATCAAGAAAGTTTTCTCCAAGAGTGACTAATGAAGCTGTTCAGAAGGCTGCTGCTGCATTGAAGGGTTCCGATCATCGCCGTGCCACAAATGTCAGCACTCGATTGGATGCTCAACAAAAGAAGCTCAACCTTCCAATCCTCCCAACCACCACAATTGGATCCTTCCCTCAGACTGTTGAACTGAGGAGGGTGCGTCGTGAATACAAGGCTAACAAAATCTCAGAGGAGGAGTATGTTAGTTCAATTAAAGAAGAAATCCGCAAAGTTGTTGAACTCCAAGAGAATCTTGATATTGATGTCCTGGTACACGGGGAGCCTGAGAGGAATGATATGGTGGAGTACTTTGGTGAGCAGTTGTCAGGCTTTGCCTTCACCGTTAACGGGTGGGTGCAATCTTATGGATCTCGTTGTGTGAAGCCGCCAATCATCTACGGTGATGTGAGCCGCCCTAAGCCAATGACTGTCTTCTGGTCATCCACTGCTCAGAGCATGACCAAACGCCCAATGAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTGTTCGAAATGACCAGCCTAGGTCTGAGACCACCTATCAGATTGCTTTGGCTATCAAGGATGAAGTAGAAGATCTTGAAAAGGCTGGTATTACTGTTATCCAAATTGATGAGGCTGCTTTGAGGGAGGGGTTACCATTGAGAAAATCAGAGCAAGCTAACTACTTGGACTGGGCTGTGCATGCCTTCAGGATCACCAATGTTGGTGTGCAGGATACAACTCAGATCCACACCCACATGTGCTACTCTAACTTCAATGACATCATCCACTCAATCATTGATATGGATGCTGATGTGATCACCATTGAAAACTCTCGCTCTGACGAAAAGCTCCTGTCAGTGTTCCGTGAAGGAGTTAAGTATGGAGCCGGAATTGGCCCCGGAGTCTATGACATTCACTCCCCGAGAATACCACCAACTGATGAAATTGCTGATAGGATCAATAAGATGCTTGCAGTGCTTGAGAAAAACATTTTGTGGGTCAACCCTGATTGTGGGCTCAAGACTCGCAAGTACCCTGAGGTGAATCCAGCCCTCACAAACATGGTTGCTGCCACAAAACTCATCCGTAGCAAGCTTTCCAGTGGCAAGTGA

>Glyma.17g184900.2 sequence-type=CDS polypeptide=Glyma.17g184900.2.p locus=Glyma.17g184900 id=Glyma.17g184900.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTCTCATATTGTTGGATACCCCCGCATGGGCCCCAAGAGAGAGCTGAAGTTTGCATTGGAGTCATTCTGGGATGGAAAGAGCAGTGCCGATGATTTGAAGAAGGTGGCTTCTGATCTCAGGGCGTCCATTTGGAAGCAGATGATTGATGCTGGGATCAAGTACATCCCCAGCAACACTTTCTCATACTACGATCAGGTGCTTGATACTACCGCCATGCTTGGCGCCGTTCCACCCAGATATGGATGGAACGGCGAAGAGATAGGATTTGATACCTTTTTCTCCATGGCCAGAGGTAATGCATCTGTGCCTGCCATGGAGATGACCAAGTGGTTTGACACCAACTACCACTTTATTGTCCCCGAGTTGGGACCTGATGTGAATTTCAGTTATGCTTCCCACAAGGCAGTGAATGAGTACAAGGAAGCCAAGGCGCTTGGAGTAGATACAGTTCCAGTCCTCATTGGCCCTGTATCATACTTGGTGCTCTCCAAACCTGCCAAGGGTGTTGATAAGTCGTTTTGTCTTCTTTCTCTCCTCCCAAAAGTCCTTGCTATCTATAAGGAAGTTGTGGCTGATCTTAAGCAAGCTGGTGCTTCGTGGATTCAATTTGACGAACCTATCCTTGTCTTGGACCTTGGCTCTCAAACGTTGCAAGCACTTACTGCAGCATACGCAGAACTTGAATCTACTCTATCGGGTTTAAATGTTCTTATTGAGACCTACTTTGCTGACATTCCTGCGGAGGCATACCAGACCCTCACAGCTCTTAATGGAGTTGCAGCATTTGGATTTGATTTAGTCCGTGGAACTAAGACTCTTGATCTAATCAAGGGTGGATTTCCCAGTGGAAAATACTTGTTTGCTGGCGTGGTGGATGGAAGGAACATCTGGGCTAATAATCTCACTGCTTCTCTTGATACATTAAATAGTCTTGAGGGAATTGTGGGAAAAGATAAACTTGTTGTGTCCACCTCCTGCTCACTTCTTCACACTGCTGTTGATCTTGTTAATGAAACCAAGTTGGATAATGAGATAAAATCATGGCTGGCTTTTGCTGCCCAAAAAATTGTTGAAGTAAATGCATTGGCCAAGGCATTGTCTGGTCAAAAGGATGAGGCCTTTTTCTCTTCTAATGCTGATGCTCAGGCATCAAGAAAGTTTTCTCCAAGAGTGACTAATGAAGCTGTTCAGAAGGCTGCTGCTGCATTGAAGGGTTCCGATCATCGCCGTGCCACAAATGTCAGCACTCGATTGGATGCTCAACAAAAGAAGCTCAACCTTCCAATCCTCCCAACCACCACAATTGGATCCTTCCCTCAGACTGTTGAACTGAGGAGGGTGCGTCGTGAATACAAGGCTAACAAAATCTCAGAGGAGGAGTATGTTAGTTCAATTAAAGAAGAAATCCGCAAAGTTGTTGAACTCCAAGAGAATCTTGATATTGATGTCCTGGTACACGGGGAGCCTGAGAGGAATGATATGGTGGAGTACTTTGGTGAGCAGTTGTCAGGCTTTGCCTTCACCGTTAACGGGTGGGTGCAATCTTATGGATCTCGTTGTGTGAAGCCGCCAATCATCTACGGTGATGTGAGCCGCCCTAAGCCAATGACTGTCTTCTGGTCATCCACTGCTCAGAGCATGACCAAACGCCCAATGAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTGTTCGAAATGACCAGCCTAGGTCTGAGACCACCTATCAGATTGCTTTGGCTATCAAGGATGAAGTAGAAGATCTTGAAAAGGCTGGTATTACTGTTATCCAAATTGATGAGGCTGCTTTGAGGGAGGGGTTACCATTGAGAAAATCAGAGCAAGCTAACTACTTGGACTGGGCTGTGCATGCCTTCAGGATCACCAATGTTGGTGTGCAGGATACAACTCAGATCCACACCCACATGTGCTACTCTAACTTCAATGACATCATCCACTCAATCATTGATATGGATGCTGATGTGATCACCATTGAAAACTCTCGCTCTGACGAAAAGCTCCTGTCAGTGTTCCGTGAAGGAGTTAAGTATGGAGCCGGAATTGGCCCCGGAGTCTATGACATTCACTCCCCGAGAATACCACCAACTGATGAAATTGCTGATAGGATCAATAAGATGCTTGCAGTGCTTGAGAAAAACATTTTGTGGGTCAACCCTGATTGTGGGCTCAAGACTCGCAAGTACCCTGAGGTGAATCCAGCCCTCACAAACATGGTTGCTGCCACAAAACTCATCCGTAGCAAGCTTTCCAGTGGCAAGTGA
Predicted protein sequences of Glyma.17g184900
>Glyma.17g184900.1.p sequence-type=predicted peptide transcript=Glyma.17g184900.1 locus=Glyma.17g184900 id=Glyma.17g184900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASHIVGYPRMGPKRELKFALESFWDGKSSADDLKKVASDLRASIWKQMIDAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYGWNGEEIGFDTFFSMARGNASVPAMEMTKWFDTNYHFIVPELGPDVNFSYASHKAVNEYKEAKALGVDTVPVLIGPVSYLVLSKPAKGVDKSFCLLSLLPKVLAIYKEVVADLKQAGASWIQFDEPILVLDLGSQTLQALTAAYAELESTLSGLNVLIETYFADIPAEAYQTLTALNGVAAFGFDLVRGTKTLDLIKGGFPSGKYLFAGVVDGRNIWANNLTASLDTLNSLEGIVGKDKLVVSTSCSLLHTAVDLVNETKLDNEIKSWLAFAAQKIVEVNALAKALSGQKDEAFFSSNADAQASRKFSPRVTNEAVQKAAAALKGSDHRRATNVSTRLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREYKANKISEEEYVSSIKEEIRKVVELQENLDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSTAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRSETTYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQANYLDWAVHAFRITNVGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTDEIADRINKMLAVLEKNILWVNPDCGLKTRKYPEVNPALTNMVAATKLIRSKLSSGK*

>Glyma.17g184900.2.p sequence-type=predicted peptide transcript=Glyma.17g184900.2 locus=Glyma.17g184900 id=Glyma.17g184900.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASHIVGYPRMGPKRELKFALESFWDGKSSADDLKKVASDLRASIWKQMIDAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYGWNGEEIGFDTFFSMARGNASVPAMEMTKWFDTNYHFIVPELGPDVNFSYASHKAVNEYKEAKALGVDTVPVLIGPVSYLVLSKPAKGVDKSFCLLSLLPKVLAIYKEVVADLKQAGASWIQFDEPILVLDLGSQTLQALTAAYAELESTLSGLNVLIETYFADIPAEAYQTLTALNGVAAFGFDLVRGTKTLDLIKGGFPSGKYLFAGVVDGRNIWANNLTASLDTLNSLEGIVGKDKLVVSTSCSLLHTAVDLVNETKLDNEIKSWLAFAAQKIVEVNALAKALSGQKDEAFFSSNADAQASRKFSPRVTNEAVQKAAAALKGSDHRRATNVSTRLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREYKANKISEEEYVSSIKEEIRKVVELQENLDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSTAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRSETTYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQANYLDWAVHAFRITNVGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTDEIADRINKMLAVLEKNILWVNPDCGLKTRKYPEVNPALTNMVAATKLIRSKLSSGK*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo