|
A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G03780.1 | AT | methionine synthase 2 | JGI | N/A | IEA |
GO:0008652 | GO-bp | cellular amino acid biosynthetic process | EnsemblGenomes | N/A | IEA |
GO:0008652 | GO-bp | cellular amino acid biosynthetic process | JGI | N/A | IEA |
GO:0009086 | GO-bp | methionine biosynthetic process | EnsemblGenomes | N/A | IEA |
GO:0009086 | GO-bp | methionine biosynthetic process | JGI | N/A | IEA |
GO:0032259 | GO-bp | methylation | EnsemblGenomes | N/A | IEA |
GO:0050667 | GO-bp | homocysteine metabolic process | EnsemblGenomes | N/A | IEA |
GO:0005576 | GO-cc | extracellular region | EnsemblGenomes | N/A | IEA |
GO:0005829 | GO-cc | cytosol | EnsemblGenomes | N/A | IEA |
GO:0003871 | GO-mf | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | EnsemblGenomes | N/A | IEA |
GO:0003871 | GO-mf | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | JGI | N/A | IEA |
GO:0008270 | GO-mf | zinc ion binding | EnsemblGenomes | N/A | IEA |
GO:0008270 | GO-mf | zinc ion binding | JGI | N/A | IEA |
GO:0008705 | GO-mf | methionine synthase activity | EnsemblGenomes | N/A | IEA |
PTHR19960 | Panther | TEKTIN | JGI | N/A | IEA |
PTHR19960:SF21 | Panther | JGI | N/A | IEA | |
PF08267 | PFAM | Cobalamin-independent synthase, N-terminal domain | JGI | N/A | IEA |
PWY-5041 | SoyCyc9 | S-adenosyl-L-methionine cycle II | Plant Metabolic Network | ISS | |
PWY-702 | SoyCyc9 | L-methionine biosynthesis II | Plant Metabolic Network | ISS | |
PWY-724 | SoyCyc9 | superpathway of L-lysine, L-threonine and L-methionine biosynthesis II | Plant Metabolic Network | ISS | |
GN7V-53059 | SoyCyc9-rxn | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase | Plant Metabolic Network | ISS |
Glyma.17g178900 not represented in the dataset |
Glyma.17g178900 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma17g20690 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.17g178900.1 sequence-type=CDS polypeptide=Glyma.17g178900.1.p locus=Glyma.17g178900 ID=Glyma.17g178900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGAGGTATTCAAATTGTAGATTTTCATTTTGCAATGACAGAGCAATGGCATCTCATATTGTTGGTTATCCACACATAGGACCCAAGAGAGAACTTAAGTCCGCTTTGGAATCTTTTTGGGATGGAAAGAGTAATAAGCAGATGGATGATGCTGGAATAAAGTATATTCCTAGCAATGCTTTCTCATACTACGATCAAGTACTGGACACAACAACCATGCTTGGGGCAGTTCCACCTAGATATAATTGGAATTGTGGGGAGATTGGGTTTGATGTTTACTTCTTGATGGCAAGAAGGAATGCATATGTACCAGCTATGGAAAAGACCAAATGTTTTGACACAAACTATCGTTACATTGTTCCTGAATTAGGTTCAGATGTTAAGTTCTCGTATGCATCACACAAGGTTGTGGATGAATACAAAGAGGCTAAAGTTATCCTTCTTGTCTATAGGGAAGTTATGGCTGAACTAAAGGCAGCTGGTGCTACTTGGATCCAATTTGATGAACCTAACCTTGTGAAGGATCTCAATGCCCACCAGTTACAAGCATTTACTCATGCCTATACAGCGCTAGAGTCAAGTTTATCTGATTTATTTGAAACATGCTACAAGGATGAGGTGGAGGATCTTGAGAAAGCTAGTATTACTGTCATCCAAATTGATAAGGCTACTCTAAGAGAAGGATTTACCAACTATGGTGTGGAGGACACTACTCAGATTCACACTCACATGTGCTACTCCAACTTCAATGACATCATTCACCCAATCATAGACATGGATGTTGATGCTGATGTGATCACCATTCACACTCACATTTCTCTTGACCTCCAGTTAAGATAA
>Glyma.17g178900.1.p sequence-type=predicted peptide transcript=Glyma.17g178900.1 locus=Glyma.17g178900 ID=Glyma.17g178900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MRYSNCRFSFCNDRAMASHIVGYPHIGPKRELKSALESFWDGKSNKQMDDAGIKYIPSNAFSYYDQVLDTTTMLGAVPPRYNWNCGEIGFDVYFLMARRNAYVPAMEKTKCFDTNYRYIVPELGSDVKFSYASHKVVDEYKEAKVILLVYREVMAELKAAGATWIQFDEPNLVKDLNAHQLQAFTHAYTALESSLSDLFETCYKDEVEDLEKASITVIQIDKATLREGFTNYGVEDTTQIHTHMCYSNFNDIIHPIIDMDVDADVITIHTHISLDLQLR*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||