Glyma.17g171100

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Report for Sequence Feature Glyma.17g171100

Feature Type:	gene_model
Chromosome:	Gm17
Start:	16172938
stop:	16175347
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.17g171100

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G67980.1	AT	caffeoyl-CoA 3-O-methyltransferase	JGI	N/A	IEA
AT4G34050.1	AT	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	JGI	N/A	IEA
GO:0032259	GO-bp	methylation	EnsemblGenomes	N/A	IEA
GO:0008171	GO-mf	O-methyltransferase activity	EnsemblGenomes	N/A	IEA
GO:0008171	GO-mf	O-methyltransferase activity	JGI	N/A	IEA
KOG1663	KOG	O-methyltransferase	JGI	N/A	IEA
PTHR10509	Panther	O-METHYLTRANSFERASE-RELATED	JGI	N/A	IEA
PF01596	PFAM	O-methyltransferase	JGI	N/A	IEA
PWY-1121	SoyCyc9	suberin monomers biosynthesis	Plant Metabolic Network		ISS
PWY-361	SoyCyc9	phenylpropanoid biosynthesis	Plant Metabolic Network		ISS
PWY-6039	SoyCyc9	chlorogenic acid biosynthesis I	Plant Metabolic Network		ISS
PWY-6792	SoyCyc9	scopoletin biosynthesis	Plant Metabolic Network		ISS
PWY-7498	SoyCyc9	phenylpropanoids methylation (ice plant)	Plant Metabolic Network		ISS
GN7V-44088	SoyCyc9-rxn	caffeoyl-CoA O-methyltransferase	Plant Metabolic Network		ISS

Proteins Associated with Glyma.17g171100

Locus	Gene Symbol	Protein Name
	SOMT-9	O-methyltransferase SOMT-9

Expression Patterns of Glyma.17g171100

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.17g171100 not represented in the dataset	Glyma.17g171100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.17g171100 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma17g18800	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.17g171100

Limit To All Plant Sequences

>Glyma.17g171100.2 sequence-type=transcript locus=Glyma.17g171100 ID=Glyma.17g171100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGAAAACGATTATTTCTAGTCCCAAAGAGCTAACAAGAGATTCAAGACCGGCATGGCTAATGAAGAGGAACAGAAAAACCACCTCTTCGGCATCAAAGATCTCGGTCACAAGACTCTCCTTCAGAGTGATGCACTCTATCAGTATATACTTGAAACCAGTGTCTATCCAAGAGAGCACGAGTGCTTGAAAGAGATACGCAAGATGACTGCAAAACACCCACTGAACATCATGGCAACACCAGCAGACGAAGGACAACTTCTGAGCATGCTTGTTAAGCTCACGAATTCAAAGAACGCCTTGGAAATTGGTGTATTCACTGGTTACTCTCTGCTCTCCACTGCCCTGGCTCTTCCCCCTGATGGAAAGGAAAATAAAAAGGGGTCGTTGGATTTCGTTTTCGTGGATGCTGATAAGGACAATTACTTGAACTACCACAAGAGGGTACTAGAGCTTGTGAAGATTGGAGGACTGATCGGATACGATAACACCCTATGGGCTGGATCTGTGGCTGCACCACCCGATGCACCATTGATGGATTACATTAAGCCTCTTCGCGGCCATGTGATGGAGCTCAACAAGTATCTGGCTCAAGATTCGAGGATCGAGATTTGCCAGCTCCCCGTGGGTGATGGGATTACCCTGTGCCGCCGCATCATCTGATCATTTTCTCTTCATCTAGATTTTTCATGACAGATATTCCTTTCATTAAAACAGGTTGCGTGAATGGTGGAGTTCTCAAATGTTCTACTGTCTTTTCTAGATCTTTGTGTGTTTCTTGTCACGCTAGAAATTTAGCTGAAAGGATACAAATCAACATTTATCTTATTTATCTACTTGCTAATCCTGTATTCAGCTTTGGAATAGAGTTGCAAAAAAATGATTTTAATAAAATTAAGAGAGAAGCTATGTTAAAAAAGCATACTTTTCATGGATAAAATATGGAAATTAATTTTGAACCGTAGATCTAATTGGCCTTAATATAAAAAGGATAAATGACACCGAATTGTATCCGAT

Coding sequences of Glyma.17g171100

Limit To All Plant Sequences

>Glyma.17g171100.1 sequence-type=CDS polypeptide=Glyma.17g171100.1.p locus=Glyma.17g171100 ID=Glyma.17g171100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTAATGAAGAGGAACAGAAAAACCACCTCTTCGGCATCAAAGATCTCGGTCACAAGACTCTCCTTCAGAGTGATGCACTCTATCAGTATATACTTGAAACCAGTGTCTATCCAAGAGAGCACGAGTGCTTGAAAGAGATACGCAAGATGACTGCAAAACACCCACTGAACATCATGGCAACACCAGCAGACGAAGGACAACTTCTGAGCATGCTTGTTAAGCTCACGAATTCAAAGAACGCCTTGGAAATTGGTGTATTCACTGGTTACTCTCTGCTCTCCACTGCCCTGGCTCTTCCCCCTGATGGAAAGATCTTGGCTTTGGATGTGAATCGCGAATACTATGAGTTAGGATTGCCAATAATTCAAAAAGCTGGAGTGGCTCACAAGATTGATTTCAGAGAAGGACCTGCTCTTCCGTTTCTTGACGAGATGCTTAAAGATGAAAATAAAAAGGGGTCGTTGGATTTCGTTTTCGTGGATGCTGATAAGGACAATTACTTGAACTACCACAAGAGGGTACTAGAGCTTGTGAAGATTGGAGGACTGATCGGATACGATAACACCCTATGGGCTGGATCTGTGGCTGCACCACCCGATGCACCATTGATGGATTACATTAAGCCTCTTCGCGGCCATGTGATGGAGCTCAACAAGTATCTGGCTCAAGATTCGAGGATCGAGATTTGCCAGCTCCCCGTGGGTGATGGGATTACCCTGTGCCGCCGCATCATCTGA

>Glyma.17g171100.2 sequence-type=CDS polypeptide=Glyma.17g171100.2.p locus=Glyma.17g171100 ID=Glyma.17g171100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTAATGAAGAGGAACAGAAAAACCACCTCTTCGGCATCAAAGATCTCGGTCACAAGACTCTCCTTCAGAGTGATGCACTCTATCAGTATATACTTGAAACCAGTGTCTATCCAAGAGAGCACGAGTGCTTGAAAGAGATACGCAAGATGACTGCAAAACACCCACTGAACATCATGGCAACACCAGCAGACGAAGGACAACTTCTGAGCATGCTTGTTAAGCTCACGAATTCAAAGAACGCCTTGGAAATTGGTGTATTCACTGGTTACTCTCTGCTCTCCACTGCCCTGGCTCTTCCCCCTGATGGAAAGGAAAATAAAAAGGGGTCGTTGGATTTCGTTTTCGTGGATGCTGATAAGGACAATTACTTGAACTACCACAAGAGGGTACTAGAGCTTGTGAAGATTGGAGGACTGATCGGATACGATAACACCCTATGGGCTGGATCTGTGGCTGCACCACCCGATGCACCATTGATGGATTACATTAAGCCTCTTCGCGGCCATGTGATGGAGCTCAACAAGTATCTGGCTCAAGATTCGAGGATCGAGATTTGCCAGCTCCCCGTGGGTGATGGGATTACCCTGTGCCGCCGCATCATCTGA

Predicted protein sequences of Glyma.17g171100

Limit To All Plant Sequences

>Glyma.17g171100.1.p sequence-type=predicted peptide transcript=Glyma.17g171100.1 locus=Glyma.17g171100 ID=Glyma.17g171100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MANEEEQKNHLFGIKDLGHKTLLQSDALYQYILETSVYPREHECLKEIRKMTAKHPLNIMATPADEGQLLSMLVKLTNSKNALEIGVFTGYSLLSTALALPPDGKILALDVNREYYELGLPIIQKAGVAHKIDFREGPALPFLDEMLKDENKKGSLDFVFVDADKDNYLNYHKRVLELVKIGGLIGYDNTLWAGSVAAPPDAPLMDYIKPLRGHVMELNKYLAQDSRIEICQLPVGDGITLCRRII*

>Glyma.17g171100.2.p sequence-type=predicted peptide transcript=Glyma.17g171100.2 locus=Glyma.17g171100 ID=Glyma.17g171100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MANEEEQKNHLFGIKDLGHKTLLQSDALYQYILETSVYPREHECLKEIRKMTAKHPLNIMATPADEGQLLSMLVKLTNSKNALEIGVFTGYSLLSTALALPPDGKENKKGSLDFVFVDADKDNYLNYHKRVLELVKIGGLIGYDNTLWAGSVAAPPDAPLMDYIKPLRGHVMELNKYLAQDSRIEICQLPVGDGITLCRRII*

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