SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.17g145500

Feature Type:gene_model
Chromosome:Gm17
Start:11919375
stop:11927385
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.17g145500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G17510.1AT UCH3 JGI N/AIEA
3.4.19.12EC ubiquitinyl hydrolase 1 JGI N/AIEA
GO:0006511GO-bp ubiquitin-dependent protein catabolic process JGI N/AIEA
GO:0005622GO-cc intracellular anatomical structure JGI N/AIEA
GO:0004843GO-mf thiol-dependent deubiquitinase JGI N/AIEA
K05609KEGG Ubiquitin system JGI N/AIEA
KOG1415 KOG Ubiquitin C-terminal hydrolase UCHL1 JGI N/AIEA
PTHR10589PantherFam UBIQUITIN CARBOXYL-TERMINAL HYDROLASE JGI N/AIEA
PF01088Pfam Ubiquitin carboxyl-terminal hydrolase, family 1 JGI N/AIEA

Gene model name correspondences to Glyma.17g145500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma17g15490 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.17g145500
>Glyma.17g145500.2 sequence-type=CDS polypeptide=Glyma.17g145500.2.p locus=Glyma.17g145500 id=Glyma.17g145500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCACTTTAGACGAACGCCCTTCTGCGAAAAGGTGGCTTCCTCTCGAAGCTAACCCTGACGTCATGAACCAGTTCCTTTGGGGTCTTGGCCTTCCAGTGGATGAGGCAGAGTGCGGTGATGTGTTTGGCTTAGATGAAGAGCTTCTGGAAATGGTTCCCAAGCCAGTTCTCGCCGTGCTTTTTCTTTATCCAATTACCGCGAAGTCTGAAGAAGAAAGGTTGCAACAGGAAAACGTAAAAAAGGATTATAGCAGTAAAGTATATTTCATGAAGCAAACCGTGGGTAATGCTTGTGGTACAATAGGGCTGCTTCATGCACTTGGGAACATAACCTCTGAAGTCAAGCTTGTTGAGGGTTCATTCTTTGATAAGTTCTTTAAATCTACTGCAAGCATGGATCCATTGCAGCGGGCTGTATTTCTTGAGAATGACAGAGAGATGGAAGTTGCTCATTCAGTAGCCGCCACTGCTGGTGATACAGTGGCATCAGATAATGTGGACACTCATTTCATCTGCTTTGCTTGTGTGGATGGTGAACTGTATGAGCTTGATGGAAGAAAGTCAGGACCAATATCTCATGGTCCATCCTCACCAAGTACTTTGTTGAGGGATGCAGCTAAAGTCATCCAGAGCATGATTCAGAAAAATCCAGGTTCTCTCAACTTCAATGTCATTGCAATATCAAAGAAATCCAAGGATGGACATTAA
Predicted protein sequences of Glyma.17g145500
>Glyma.17g145500.2.p sequence-type=predicted peptide transcript=Glyma.17g145500.2 locus=Glyma.17g145500 id=Glyma.17g145500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATLDERPSAKRWLPLEANPDVMNQFLWGLGLPVDEAECGDVFGLDEELLEMVPKPVLAVLFLYPITAKSEEERLQQENVKKDYSSKVYFMKQTVGNACGTIGLLHALGNITSEVKLVEGSFFDKFFKSTASMDPLQRAVFLENDREMEVAHSVAATAGDTVASDNVDTHFICFACVDGELYELDGRKSGPISHGPSSPSTLLRDAAKVIQSMIQKNPGSLNFNVIAISKKSKDGH*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo