SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.17g121500

Feature Type:gene_model
Chromosome:Gm17
Start:9691807
stop:9694318
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.17g121500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G18550.2AT ATTCP18,BRC1,TCP18 JGI N/AIEA
PTHR31072PantherFam TRANSCRIPTION FACTOR TCP4-RELATED JGI N/AIEA
PF03634Pfam TCP family transcription factor JGI N/AIEA

Proteins Associated with Glyma.17g121500
LocusGene SymbolProtein Name
TCP52 Teosinte branched1 and cycloidea and proliferating cell factor family protein gene 52

Gene model name correspondences to Glyma.17g121500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma17g13065 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.17g121500
>Glyma.17g121500.1 sequence-type=CDS polypeptide=Glyma.17g121500.1.p locus=Glyma.17g121500 id=Glyma.17g121500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTATTCCTCAAATACCTTCCTCAACGGCAATGACCTAATCTCGTACCCTAACCAACCATTTTGCTTTAGGCCTTTTTCCTTTGAAAGCAACCCAACTTATAATTTTTCAAAAGAAGAAGCCAATTCCAATTACGCCCTTCCTCCTCCTCCACCTCCTCCTCCTTTGTCCTTTTTCCAATCTCCCTTTGACGAAAATATCTTCCTAGAACACCACCACCATGACTTGCTCCTACTTCATCAGTACTCTCTGACTGACTCTGGAGTATCAAAAAACCTTGAAGTTGTGGCCGAAATCTCGCCAATTCCTTGCCCTGAACAAGGTGGAATTGCGATGGAGCACACTCCAAGAAAGAGATCCAGCAAGAGAGACCGCCACAGCAAGATCAACACCGCGAGAGGCCTCAGGGATCGAAGAATGAGGCTGTCCCTCGAAGTCGCGAAGCGGTTTTTCGGGTTGCAAGACATGCTAGGCTTTGACAAGGCCAGCAAAACCGTGGAGTGGTTACTGAACCAAGCAAAGGGTGAAATCAAACAACTTGCAAGGGAAAAAACAAGTGTTGTTGGTGGTGGTGGCAAGAGTGCATCATCAACTTCGGAATGCGAAGGGGTGTCTAGCTTGGACGAGGTTGCAGTGAGTACTGGAGGAGTTAATAACGAGGAGCAAGAGAGGGAGACAGTACCAAACATGATGAAGAGAAGAAAAAGTAAGGTTTGTAGAAAGAGTGCATTCAATGCTATTGATAAGGAATCGAGGGAAAAGGCAAGAGAAAGGGCAAGGGAAAGAACAAGAGAGAAGATGAGAACTCGGAGAGTACTTGTTTCTGATGCATCAAACCTGAACCGTTTGAGTTCTTGGAACCCCTTTGAAACGGTTGAAGACTCTGCGGGTACTACACATCATCCCTCCTTGGATGTGCACCTTCATGAGGCTGATCAAGAACCAATTAGTTCTCACAACGTGAAGGAGCATAATTTGGGAGAGGACATGGCGCATGAAGATAATTCTTTGGCGCTCATGAACAAGTGGAGCCCAACTATGTTGTTCAATTCTCTTCACAACTCAGGAATCCTTCAGGAACATCAATTCGCAGAATTTCAGTCCTTGGGGAAACAATGGGAAGCCTACAGCAATCAAATCTGA

>Glyma.17g121500.2 sequence-type=CDS polypeptide=Glyma.17g121500.2.p locus=Glyma.17g121500 id=Glyma.17g121500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTATTCCTCAAATACCTTCCTCAACGGCAATGACCTAATCTCGTACCCTAACCAACCATTTTGCTTTAGGCCTTTTTCCTTTGAAAGCAACCCAACTTATAATTTTTCAAAAGAAGAAGCCAATTCCAATTACGCCCTTCCTCCTCCTCCACCTCCTCCTCCTTTGTCCTTTTTCCAATCTCCCTTTGACGAAAATATCTTCCTAGAACACCACCACCATGACTTGCTCCTACTTCATCAGTACTCTCTGACTGACTCTGGAGTATCAAAAAACCTTGAAGTTGTGGCCGAAATCTCGCCAATTCCTTGCCCTGAACAAGGTGGAATTGCGATGGAGCACACTCCAAGAAAGAGATCCAGCAAGAGAGACCGCCACAGCAAGATCAACACCGCGAGAGGCCTCAGGGATCGAAGAATGAGGCTGTCCCTCGAAGTCGCGAAGCGGTTTTTCGGGTTGCAAGACATGCTAGGCTTTGACAAGGCCAGCAAAACCGTGGAGTGGTTACTGAACCAAGCAAAGGGTGAAATCAAACAACTTGCAAGGGAAAAAACAAGTGTTGTTGGTGGTGGTGGCAAGAGTGCATCATCAACTTCGGAATGCGAAGGGGTGTCTAGCTTGGACGAGGTTGCAGTGAGTACTGGAGGAGTTAATAACGAGGAGCAAGAGAGGGAGACAGTACCAAACATGATGAAGAGAAGAAAAAGTAAGGTTTGTAGAAAGAGTGCATTCAATGCTATTGATAAGGAATCGAGGGAAAAGGCAAGAGAAAGGGCAAGGGAAAGAACAAGAGAGAAGATGAGAACTCGGAGAGTACTTGTTTCTGATGCATCAAACCTGAACCGTTTGAGTTCTTGGAACCCCTTTGAAACGGTTGAAGACTCTGCGGGTACTACACATCATCCCTCCTTGGATGTGCACCTTCATGAGGCTGATCAAGAACCAATTAGTTCTCACAACGTGAAGGAGCATAATTTGGGAGAGGACATGGCGCATGAAGATAATTCTTTGGCGCTCATGAACAAGTGGAGCCCAACTATGTTGTTCAATTCTCTTCACAACTCAGGAATCCTTCAGGAACATCAATTCGCAGAATTTCAGTCCTTGGGGAAACAATGGGAAGCCTACAGCAATCAAATCTGA

>Glyma.17g121500.3 sequence-type=CDS polypeptide=Glyma.17g121500.3.p locus=Glyma.17g121500 id=Glyma.17g121500.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTATTCCTCAAATACCTTCCTCAACGGCAATGACCTAATCTCGTACCCTAACCAACCATTTTGCTTTAGGCCTTTTTCCTTTGAAAGCAACCCAACTTATAATTTTTCAAAAGAAGAAGCCAATTCCAATTACGCCCTTCCTCCTCCTCCACCTCCTCCTCCTTTGTCCTTTTTCCAATCTCCCTTTGACGAAAATATCTTCCTAGAACACCACCACCATGACTTGCTCCTACTTCATCAGTACTCTCTGACTGACTCTGGAGTATCAAAAAACCTTGAAGTTGTGGCCGAAATCTCGCCAATTCCTTGCCCTGAACAAGGTGGAATTGCGATGGAGCACACTCCAAGAAAGAGATCCAGCAAGAGAGACCGCCACAGCAAGATCAACACCGCGAGAGGCCTCAGGGATCGAAGAATGAGGCTGTCCCTCGAAGTCGCGAAGCGGTTTTTCGGGTTGCAAGACATGCTAGGCTTTGACAAGGCCAGCAAAACCGTGGAGTGGTTACTGAACCAAGCAAAGGGTGAAATCAAACAACTTGCAAGGGAAAAAACAAGTGTTGTTGGTGGTGGTGGCAAGAGTGCATCATCAACTTCGGAATGCGAAGGGGTGTCTAGCTTGGACGAGGTTGCAGTGAGTACTGGAGGAGTTAATAACGAGGAGCAAGAGAGGGAGACAGTACCAAACATGATGAAGAGAAGAAAAAGTAAGGTTTGTAGAAAGAGTGCATTCAATGCTATTGATAAGGAATCGAGGGAAAAGGCAAGAGAAAGGGCAAGGGAAAGAACAAGAGAGAAGATGAGAACTCGGAGAGTACTTGTTTCTGATGCATCAAACCTGAACCGTTTGAGTTCTTGGAACCCCTTTGAAACGGTTGAAGACTCTGCGGGTACTACACATCATCCCTCCTTGGATGTGCACCTTCATGAGGCTGATCAAGAACCAATTAGTTCTCACAACGTGAAGGAGCATAATTTGGGAGAGGACATGGCGCATGAAGATAATTCTTTGGCGCTCATGAACAAGTGGAGCCCAACTATGTTGTTCAATTCTCTTCACAACTCAGGAATCCTTCAGGAACATCAATTCGCAGAATTTCAGTCCTTGGGGAAACAATGGGAAGCCTACAGCAATCAAATCTGA
Predicted protein sequences of Glyma.17g121500
>Glyma.17g121500.1.p sequence-type=predicted peptide transcript=Glyma.17g121500.1 locus=Glyma.17g121500 id=Glyma.17g121500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MYSSNTFLNGNDLISYPNQPFCFRPFSFESNPTYNFSKEEANSNYALPPPPPPPPLSFFQSPFDENIFLEHHHHDLLLLHQYSLTDSGVSKNLEVVAEISPIPCPEQGGIAMEHTPRKRSSKRDRHSKINTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVEWLLNQAKGEIKQLAREKTSVVGGGGKSASSTSECEGVSSLDEVAVSTGGVNNEEQERETVPNMMKRRKSKVCRKSAFNAIDKESREKARERARERTREKMRTRRVLVSDASNLNRLSSWNPFETVEDSAGTTHHPSLDVHLHEADQEPISSHNVKEHNLGEDMAHEDNSLALMNKWSPTMLFNSLHNSGILQEHQFAEFQSLGKQWEAYSNQI*

>Glyma.17g121500.2.p sequence-type=predicted peptide transcript=Glyma.17g121500.2 locus=Glyma.17g121500 id=Glyma.17g121500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MYSSNTFLNGNDLISYPNQPFCFRPFSFESNPTYNFSKEEANSNYALPPPPPPPPLSFFQSPFDENIFLEHHHHDLLLLHQYSLTDSGVSKNLEVVAEISPIPCPEQGGIAMEHTPRKRSSKRDRHSKINTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVEWLLNQAKGEIKQLAREKTSVVGGGGKSASSTSECEGVSSLDEVAVSTGGVNNEEQERETVPNMMKRRKSKVCRKSAFNAIDKESREKARERARERTREKMRTRRVLVSDASNLNRLSSWNPFETVEDSAGTTHHPSLDVHLHEADQEPISSHNVKEHNLGEDMAHEDNSLALMNKWSPTMLFNSLHNSGILQEHQFAEFQSLGKQWEAYSNQI*

>Glyma.17g121500.3.p sequence-type=predicted peptide transcript=Glyma.17g121500.3 locus=Glyma.17g121500 id=Glyma.17g121500.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MYSSNTFLNGNDLISYPNQPFCFRPFSFESNPTYNFSKEEANSNYALPPPPPPPPLSFFQSPFDENIFLEHHHHDLLLLHQYSLTDSGVSKNLEVVAEISPIPCPEQGGIAMEHTPRKRSSKRDRHSKINTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVEWLLNQAKGEIKQLAREKTSVVGGGGKSASSTSECEGVSSLDEVAVSTGGVNNEEQERETVPNMMKRRKSKVCRKSAFNAIDKESREKARERARERTREKMRTRRVLVSDASNLNRLSSWNPFETVEDSAGTTHHPSLDVHLHEADQEPISSHNVKEHNLGEDMAHEDNSLALMNKWSPTMLFNSLHNSGILQEHQFAEFQSLGKQWEAYSNQI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo