SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.17g120000

Feature Type:gene_model
Chromosome:Gm17
Start:9498337
stop:9507078
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.17g120000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G32551.1AT LUG,RON2 JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
KOG0266 KOG WD40 repeat-containing protein JGI N/AIEA
PTHR22847PantherFam WD40 REPEAT PROTEIN JGI N/AIEA
PF00400Pfam WD domain, G-beta repeat JGI N/AIEA
PF08513Pfam LisH JGI N/AIEA

Gene model name correspondences to Glyma.17g120000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma17g12900 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.17g120000
>Glyma.17g120000.1 sequence-type=CDS polypeptide=Glyma.17g120000.1.p locus=Glyma.17g120000 id=Glyma.17g120000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCTAATCCCAACTGGGAAGCGGATAAAATGTTAGATTTGTATATTCACGATTATCTCACGAAGAGACAATTACATGCTACTGCAAGAATATTTCAGGCCGAAGGAAATGTTTCAACGGATCCTATTGTTATAGATGCACCTAGTGGTTTTCTTTTTGAGTGGTGGTCTGTCTTCTGGGACATATATATTGCCAGGGCAAATCAGAAGCTCCAAGATACAGCTCAGAAGCACCAAGAAGCAGCAGTATCTTACAGTAAGAGTCAACAAATTAAGGCTCGACTAATGCAGAAGCAACTGGAGCAAGAGCTTCAGAATACAAACCAGAATCAGCAAATGCAATTCTTATTGCAAAGACATGCTCAGCAGCAGCAGCAACGTCTGCGTGGAACTCAACTTATTAGTGGCAGTGCTAGCTGTCCTATTAGCAGTGATCCTTTGATGAGGCAGAACCGGGCAACTTCTAATGCTAATACAACAAAAACTTATGAAGACAGGTTGAAGCTTCCACTTCAGAAAGATGCCTTAGATGACACAAGCATTCAGCAAAAAGTAATTGATGATGTTGCTCAGCTTCTAAACCCAAACCATGCCTTATTGTTGAAAGCAGCAGCAACAACTGGTGAACAGGCTACAGGACAGACATTGCTCAGTGCACCTAGTATTTTACAGGGGGATATTCAGCATGTCCAAAATCTGAACCAGAAGCTTCCAGGGTCTACACAAGACTTAAACAGTGATATGAATGCAATGATGAGGTCTCAAGCTGTTGTTTCAGAAGGATCCTTTATCAGTTGTCATGGTTCAAATCAAGGTGGTAGCAATTTGACTCTTAAAGGATGGCCTCTAGCAGGACTGGATGAGCTCCGCTCAGGATTTCTCCAGCCGAATAATTTGATGCAGTCTTCACAATCTTTCCATCAACTTTCTGTACGGCAGCAACTTATGCTTCAGGCACAACAAAATTTGATTTCTCCTTCTGCCAGTGATTTTGAGAGCAGAAGACTCAGGATGCTTGTTAATGATCAAAACATGGCTCTTTTGAAAGATGGCCAATCAAATTCTTTAGGTGATTTAATTCCTGATAACAGGTCACCCGCTCAAGTTGGTTCCTCAGTGCTGCCTCATCCTGACTCAGATATGTTCCTTAAGCAACAAATTCAAAAGAGTAGTCAGCAGCATCAACAATGTTCACAGCACCCTCTTTCAAGCCATCAGTCTGAATCTCTCCAGAAGCAAGAAAAAAATGGTCCTGGAACCATGACTGTAGAGGGCAATGTGTCCAATACCTTACAAGGAAACAACCAGGTTTCCATAAGTAAAACAGGGCGGAAGAGAAAACCAGCATCATCTTCTGGTCCTGCCAATAGTTCTGGAACTGCAAACACTACAGGACCACCTATCAGTTCACCTAAAACACCATCTACACAAACACCTGCAGACATGATGACAGTGTCAACTCTGCAACAGAATGTTCCTTCCTCTAAGTCATCATTTATGTTTGGTACTGATGGTTTGGGCCCACTTACGTCAGCACAGAATCAATTGGCTGATATGGATCACCTTGTGGGTGATGGATGTTTGGGCGACAATGTTGAGTCATTCTTATCTCCTGATGATACAGATGTTAGCAAAAAAATTGGCAAAGAAATCTCATTCAAGGATATCAAGCATATAGGGGCAAGTTTGCATAAAGTTGAGTGTTGTCACTTCTCATCAGATGGAAAACTTCTTGCTACAGGTGGCCACGATAATAAGGCTTCTTTGTGGTGCACAGAATTGTTTAACCTGAAATCTACACTTGAAGAGCACAGTGAATGGATAACTGATGTTCGATTTTGTCCAAGCATGTTGCGTGTTGCTACATCCTCAGCAGACAAAACTGTTAGGGTTTGGGATGTTGATAATCCAAGTTATTCTCTTCGTACATTCACAGGACATGCAACAACTGTGATGTCACTAGATTTTCACCCTAGCAAAGATGACCTTATTTGCTCTTGTGACAATAGTGAGATAAGATACTGGAGTATTAAAAATGGTAGTTGTACTGGGGTTTTCAAGGGTGGTGCAACTCAGATGAGATTTCAACCTTGCTTGGGAAGGCTTCTTGCAGCTGCAGTGGATAATTTCGTATCCATTTTTGATGTGGAAACCCTGGGTTGCAGACTTAAATTACAGGGCCATAATAATCTTGTCCGATCTGTGTGCTGGGATTTGTCTGGAAAATTTTTGGCTTCTCTCAGTGATGATATGGTTAGAGTATGGAATGTTGCGTCCGGTGGCAAAGGGGAATGCATTCACGAGTTGAAAGATTGTAGGAACAAATTCAGCACCTGTGTTTTCCATCCCTTCTATCCTTTGCTGGTCATTGGCTGCCATGAGACTATTGAGCTGTGGGACTTCGGTGATAACAAGACAATGACTCTGCATGCACATGACGATGTTGTATCTTCCTTGGCAGTATCGAATGTTACTGGATTGGTGGCTTCAACTAGTCATGACAAGCATTTCAAGATCTGGAAGTGA
Predicted protein sequences of Glyma.17g120000
>Glyma.17g120000.1.p sequence-type=predicted peptide transcript=Glyma.17g120000.1 locus=Glyma.17g120000 id=Glyma.17g120000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSNPNWEADKMLDLYIHDYLTKRQLHATARIFQAEGNVSTDPIVIDAPSGFLFEWWSVFWDIYIARANQKLQDTAQKHQEAAVSYSKSQQIKARLMQKQLEQELQNTNQNQQMQFLLQRHAQQQQQRLRGTQLISGSASCPISSDPLMRQNRATSNANTTKTYEDRLKLPLQKDALDDTSIQQKVIDDVAQLLNPNHALLLKAAATTGEQATGQTLLSAPSILQGDIQHVQNLNQKLPGSTQDLNSDMNAMMRSQAVVSEGSFISCHGSNQGGSNLTLKGWPLAGLDELRSGFLQPNNLMQSSQSFHQLSVRQQLMLQAQQNLISPSASDFESRRLRMLVNDQNMALLKDGQSNSLGDLIPDNRSPAQVGSSVLPHPDSDMFLKQQIQKSSQQHQQCSQHPLSSHQSESLQKQEKNGPGTMTVEGNVSNTLQGNNQVSISKTGRKRKPASSSGPANSSGTANTTGPPISSPKTPSTQTPADMMTVSTLQQNVPSSKSSFMFGTDGLGPLTSAQNQLADMDHLVGDGCLGDNVESFLSPDDTDVSKKIGKEISFKDIKHIGASLHKVECCHFSSDGKLLATGGHDNKASLWCTELFNLKSTLEEHSEWITDVRFCPSMLRVATSSADKTVRVWDVDNPSYSLRTFTGHATTVMSLDFHPSKDDLICSCDNSEIRYWSIKNGSCTGVFKGGATQMRFQPCLGRLLAAAVDNFVSIFDVETLGCRLKLQGHNNLVRSVCWDLSGKFLASLSDDMVRVWNVASGGKGECIHELKDCRNKFSTCVFHPFYPLLVIGCHETIELWDFGDNKTMTLHAHDDVVSSLAVSNVTGLVASTSHDKHFKIWK*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo