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Report for Sequence Feature Glyma.17g119100

Feature Type:gene_model
Chromosome:Gm17
Start:9411976
stop:9415014
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.17g119100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G43620.1AT UDP-Glycosyltransferase superfamily protein JGI N/AIEA
AT3G07020.1AT UDP-Glycosyltransferase superfamily protein JGI N/AIEA
GO:0005975GO-bp carbohydrate metabolic process EnsemblGenomesN/AIEA
GO:0005975GO-bp carbohydrate metabolic process JGI N/AIEA
GO:0030259GO-bp lipid glycosylation EnsemblGenomesN/AIEA
GO:0030259GO-bp lipid glycosylation JGI N/AIEA
GO:0016758GO-mf transferase activity, transferring hexosyl groups EnsemblGenomesN/AIEA
GO:0016758GO-mf transferase activity, transferring hexosyl groups JGI N/AIEA
PF03033PFAM Glycosyltransferase family 28 N-terminal domain JGI N/AIEA
GN7V-67639SoyCyc9-rxn soladodine glucosyltransferase Plant Metabolic Network ISS

Expression Patterns of Glyma.17g119100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.17g119100 not represented in the dataset
Glyma.17g119100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.17g119100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma17g12812 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.17g119100
>Glyma.17g119100.2 sequence-type=transcript locus=Glyma.17g119100 ID=Glyma.17g119100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTTCCCTGATATAGGTAAAAGATATGATCTGGACTTTCAATCTCCTCAAAAGTCTGGACAAAATTTTTAGTCAGCAGAGGATATGATAGACTTGTGCAAGGAACTATGCTTTGGTTTGGAACATTGCATCACATCCCCTGTTGGAACTGAGAGGAACCCACTTATAGTTGGTGATGAGATTTTTCTTTCTAGATCAATGACAGGAAAGAGGGATTCCCTAGGCAGGACACAATATTGGACAAGCTGTCTGAGAGGGCGAAGCAACTGACGACTAACCTAGTAAAGATACAAAATGATGGCACTGTTGAAGTTGATATAGAAATGAGTGCATCTGTTGCTCCAGAATTGTTAGAGCTCCAATCTTTTGTCGAGTCAACAGTGAGTGGAAGTCTTAGTTCAAAATCAAAAAAATCTGTTCCATGGTTACAAATTGTCATACTTGTGGTTGGAACTAGAGGCGACGTACAACCTTTTCTGGCCATTGCAAAGAAACTTCAGGACCATCCAGAAGAAGTTAAGGATTAAGATTCCCAAGGCCACTGGTGGTAACAAAAATGCAGAGAAAGTTTCACTTTCTTGTCAAAAACAAAGCCACTGCTAGTGCGATGCTGATCTTCGTAGATAGGTGTCCTTACGATTTTTTCCGCTCTCTAAAACAGTGTTTGTGTTTGGTTGGTTGGTGAGAAAGTTTAGGGTCTTCAAACCTAGTAGAGATTAACCTAGTAGTGTTTTTTTGGGGGGTATTAATCATAGACATTAATTTCTACAAGGGCTGACCTACCAATATAACAATTGAAAGAGCACCATGTGCACGTTGTAGGTGGCAACAAAAGTCTAGCACAACCGAAATAACGATGTTTGTCCCCGGAATAAAACCATGAGTCACTGTGAAACAAAAATTAACTCTAAGGGTAAAAAAAAAGGGAGAAAGAATTTGAGTGGCTTTATTAAGGAAGAATAAAGGAGAAAATGTTTTGAAATTCATTAGATGATTTTGCAATTTT

>Glyma.17g119100.3 sequence-type=transcript locus=Glyma.17g119100 ID=Glyma.17g119100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTTCCCTGATATAGGTAAAAGATATGATCTGGACTTTCAATCTCCTCAAAAGTCTGGACAAAATTTTTAGTCAGCAGAGGATATGATAGACTTGTGCAAGGAACTATGCTTTGCAACTGACGACTAACCTAGTAAAGATACAAAATGATGGCACTGTTGAAGTTGATATAGAAATGAGTGCATCTGTTGCTCCAGAATTGTTAGAGCTCCAATCTTTTGTCGAGTCAACAGTGAGTGGAAGTCTTAGTTCAAAATCAAAAAAATCTGTTCCATGGTTACAAATTGTCATACTTGTGGTTGGAACTAGAGGCGACGTACAACCTTTTCTGGCCATTGCAAAGAAACTTCAGGACCATCCAGAAGAAGTTAAGGATTAAGATTCCCAAGGCCACTGGTGGTAACAAAAATGCAGAGAAAGTTTCACTTTCTTGTCAAAAACAAAGCCACTGCTAGTGCGATGCTGATCTTCGTAGATAGGTGTCCTTACGATTTTTTCCGCTCTCTAAAACAGTGTTTGTGTTTGGTTGGTTGGTGAGAAAGTTTAGGGTCTTCAAACCTAGTAGAGATTAACCTAGTAGTGTTTTTTTGGGGGGTATTAATCATAGACATTAATTTCTACAAGGGCTGACCTACCAATATAACAATTGAAAGAGCACCATGTGCACGTTGTAGGTGGCAACAAAAGTCTAGCACAACCGAAATAACGATGTTTGTCCCCGGAATAAAACCATGAGTCACTGTGAAACAAAAATTAACTCTAAGGGTAAAAAAAAAGGGAGAAAGAATTTGAGTGGCTTTATTAAGGAAGAATAAAGGAGAAAATGTTTTGAAATTCATTAGATGATTTTGCAATTTT

>Glyma.17g119100.4 sequence-type=transcript locus=Glyma.17g119100 ID=Glyma.17g119100.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTTCCCTGATATAGGTAAAAGATATGATCTGGACTTTCAATCTCCTCAAAAGTCTGGACAAAATTTTTAGTCAGCAGAGGATATGATAGACTTGTGCAAGGAACTATGCTTTGCAACTGACGACTAACCTAGTAAAGATACAAAATGATGGCACTGTTGAAGTTGATATAGAAATGAGTGCATCTGTTGCTCCAGAATTGTTAGAGCTCCAATCTTTTGTCGAGTCAACAGTGAGTGGAAGTCTTAGTTCAAAATCAAAAAAATCTGTTCCATGGTTACAAATTGTCATACTTGTGGTTGGAACTAGAGGCGACGTACAACCTTTTCTGGCCATTGCAAAGAAACTTCAGATGGCATGTTTAAATTGTTTCCGCTGCACGCACGTCCCTACTCCACTAACCTCATACTCTTTGTGCTCAACTCCAATTGGTTCTTCTAGGCTAGTTTAATCTGTAATTGCAACCTCGTACGTCATTCCTTGCAGGACCATCCAGAAGAAGTTAAGGATTAAGATTCCCAAGGCCACTGGTGGTAACAAAAATGCAGAGAAAGTTTCACTTTCTTGTCAAAAACAAAGCCACTGCTAGTGCGATGCTGATCTTCGTAGATAGGTGTCCTTACGATTTTTTCCGCTCTCTAAAACAGTGTTTGTGTTTGGTTGGTTGGTGAGAAAGTTTAGGGTCTTCAAACCTAGTAGAGATTAACCTAGTAGTGTTTTTTTGGGGGGTATTAATCATAGACATTAATTTCTACAAGGGCTGACCTACCAATATAACAATTGAAAGAGCACCATGTGCACGTTGTAGGTGGCAACAAAAGTCTAGCACAACCGAAATAACGATGTTTGTCCCCGGAATAAAACCATGAGTCACTGTGAAACAAAAATTAACTCTAAGGGTAAAAAAAAAGGGAGAAAGAATTTGAGTGGCTTTATTAAGGAAGAATAAAGGAGAAAATGTTTTGAAATTCATTAGATGATTTTGCAATTTT

>Glyma.17g119100.5 sequence-type=transcript locus=Glyma.17g119100 ID=Glyma.17g119100.5.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATACGTCTTGTATGTCCAATTCTGTTCCTGAAGGTTTGGAACATTGCATCACATCCCCTGTTGGAACTGAGAGGAACCCACTTATAGTTGGTGATGAGATTTTTCTTTCTAGATCAATGACAGGAAAGAGGGATTCCCTAGGCAGGACACAATATTGGACAAGCTGTCTGAGAGGGCGAAGCAACTGACGACTAACCTAGTAAAGATACAAAATGATGGCACTGTTGAAGTTGATATAGAAATGAGTGCATCTGTTGCTCCAGAATTGTTAGAGCTCCAATCTTTTGTCGAGTCAACAGTGAGTGGAAGTCTTAGTTCAAAATCAAAAAAATCTGTTCCATGGTTACAAATTGTCATACTTGTGGTTGGAACTAGAGGCGACGTACAACCTTTTCTGGCCATTGCAAAGAAACTTCAGATGGCATGTTTAAATTGTTTCCGCTGCACGCACGTCCCTACTCCACTAACCTCATACTCTTTGTGCTCAACTCCAATTGGTTCTTCTAGGCTAGTTTAATCTGTAATTGCAACCTCGTACGTCATTCCTTGCAGGACCATCCAGAAGAAGTTAAGGATTAAGATTCCCAAGGCCACTGGTGGTAACAAAAATGCAGAGAAAGTTTCACTTTCTTGTCAAAAACAAAGCCACTGCTAGTGCGATGCTGATCTTCGTAGATAGGTGTCCTTACGATTTTTTCCGCTCTCTAAAACAGTGTTTGTGTTTGGTTGGTTGGTGAGAAAGTTTAGGGTCTTCAAACCTAGTAGAGATTAACCTAGTAGTGTTTTTTTGGGGGGTATTAATCATAGACATTAATTTCTACAAGGGCTGACCTACCAATATAACAATTGAAAGAGCACCATGTGCACGTTGTAGGTGGCAACAAAAGTCTAGCACAACCGAAATAACGATGTTTGTCCCCGGAATAAAACCATGAGTCACTGTGAAACAAAAATTAACTCTAAGGGTAAAAAAAAAGGGAGAAAGAATTTGAGTGGCTTTATTAAGGAAGAATAAAGGAGAAAATGTTTTGAAATTCATTAGATGATTTTGCAATTTT
Coding sequences of Glyma.17g119100
>Glyma.17g119100.1 sequence-type=CDS polypeptide=Glyma.17g119100.1.p locus=Glyma.17g119100 ID=Glyma.17g119100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGTGCATCTGTTGCTCCAGAATTGTTAGAGCTCCAATCTTTTGTCGAGTCAACAGTGAGTGGAAGTCTTAGTTCAAAATCAAAAAAATCTGTTCCATGGTTACAAATTGTCATACTTGTGGTTGGAACTAGAGGCGACGTACAACCTTTTCTGGCCATTGCAAAGAAACTTCAGATGGCATGTTTAAATTGTTTCCGCTGCACGCACGTCCCTACTCCACTAACCTCATACTCTTTGTGCTCAACTCCAATTGGTTCTTCTAGGCTAGTTTAA

>Glyma.17g119100.2 sequence-type=CDS polypeptide=Glyma.17g119100.2.p locus=Glyma.17g119100 ID=Glyma.17g119100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGTGCATCTGTTGCTCCAGAATTGTTAGAGCTCCAATCTTTTGTCGAGTCAACAGTGAGTGGAAGTCTTAGTTCAAAATCAAAAAAATCTGTTCCATGGTTACAAATTGTCATACTTGTGGTTGGAACTAGAGGCGACGTACAACCTTTTCTGGCCATTGCAAAGAAACTTCAGGACCATCCAGAAGAAGTTAAGGATTAA

>Glyma.17g119100.3 sequence-type=CDS polypeptide=Glyma.17g119100.3.p locus=Glyma.17g119100 ID=Glyma.17g119100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGTGCATCTGTTGCTCCAGAATTGTTAGAGCTCCAATCTTTTGTCGAGTCAACAGTGAGTGGAAGTCTTAGTTCAAAATCAAAAAAATCTGTTCCATGGTTACAAATTGTCATACTTGTGGTTGGAACTAGAGGCGACGTACAACCTTTTCTGGCCATTGCAAAGAAACTTCAGGACCATCCAGAAGAAGTTAAGGATTAA

>Glyma.17g119100.4 sequence-type=CDS polypeptide=Glyma.17g119100.4.p locus=Glyma.17g119100 ID=Glyma.17g119100.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGTGCATCTGTTGCTCCAGAATTGTTAGAGCTCCAATCTTTTGTCGAGTCAACAGTGAGTGGAAGTCTTAGTTCAAAATCAAAAAAATCTGTTCCATGGTTACAAATTGTCATACTTGTGGTTGGAACTAGAGGCGACGTACAACCTTTTCTGGCCATTGCAAAGAAACTTCAGATGGCATGTTTAAATTGTTTCCGCTGCACGCACGTCCCTACTCCACTAACCTCATACTCTTTGTGCTCAACTCCAATTGGTTCTTCTAGGCTAGTTTAA

>Glyma.17g119100.5 sequence-type=CDS polypeptide=Glyma.17g119100.5.p locus=Glyma.17g119100 ID=Glyma.17g119100.5.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGTGCATCTGTTGCTCCAGAATTGTTAGAGCTCCAATCTTTTGTCGAGTCAACAGTGAGTGGAAGTCTTAGTTCAAAATCAAAAAAATCTGTTCCATGGTTACAAATTGTCATACTTGTGGTTGGAACTAGAGGCGACGTACAACCTTTTCTGGCCATTGCAAAGAAACTTCAGATGGCATGTTTAAATTGTTTCCGCTGCACGCACGTCCCTACTCCACTAACCTCATACTCTTTGTGCTCAACTCCAATTGGTTCTTCTAGGCTAGTTTAA
Predicted protein sequences of Glyma.17g119100
>Glyma.17g119100.1.p sequence-type=predicted peptide transcript=Glyma.17g119100.1 locus=Glyma.17g119100 ID=Glyma.17g119100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSASVAPELLELQSFVESTVSGSLSSKSKKSVPWLQIVILVVGTRGDVQPFLAIAKKLQMACLNCFRCTHVPTPLTSYSLCSTPIGSSRLV*

>Glyma.17g119100.2.p sequence-type=predicted peptide transcript=Glyma.17g119100.2 locus=Glyma.17g119100 ID=Glyma.17g119100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSASVAPELLELQSFVESTVSGSLSSKSKKSVPWLQIVILVVGTRGDVQPFLAIAKKLQDHPEEVKD*

>Glyma.17g119100.3.p sequence-type=predicted peptide transcript=Glyma.17g119100.3 locus=Glyma.17g119100 ID=Glyma.17g119100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSASVAPELLELQSFVESTVSGSLSSKSKKSVPWLQIVILVVGTRGDVQPFLAIAKKLQDHPEEVKD*

>Glyma.17g119100.4.p sequence-type=predicted peptide transcript=Glyma.17g119100.4 locus=Glyma.17g119100 ID=Glyma.17g119100.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSASVAPELLELQSFVESTVSGSLSSKSKKSVPWLQIVILVVGTRGDVQPFLAIAKKLQMACLNCFRCTHVPTPLTSYSLCSTPIGSSRLV*

>Glyma.17g119100.5.p sequence-type=predicted peptide transcript=Glyma.17g119100.5 locus=Glyma.17g119100 ID=Glyma.17g119100.5.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSASVAPELLELQSFVESTVSGSLSSKSKKSVPWLQIVILVVGTRGDVQPFLAIAKKLQMACLNCFRCTHVPTPLTSYSLCSTPIGSSRLV*






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