Report for Sequence Feature Glyma.17g109500
| Feature Type: | gene_model |
| Chromosome: | Gm17 |
| Start: | 8571164 |
| stop: | 8580162 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
| 
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Annotations for Glyma.17g109500
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT1G05500.1 | AT |
ATSYTE,NTMC2T2.1,NTMC2TYPE2.1,SYT5,SYTE |
JGI | N/A | IEA |
| GO:0005515 | GO-mf |
protein binding |
JGI | N/A | IEA |
| KOG1012 |
KOG |
Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain |
JGI | N/A | IEA |
| KOG1328 |
KOG |
Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation |
JGI | N/A | IEA |
| PTHR10774 | PantherFam |
EXTENDED SYNAPTOTAGMIN-RELATED |
JGI | N/A | IEA |
| PF00168 | Pfam |
C2 domain |
JGI | N/A | IEA |
| PF17047 | Pfam |
Synaptotagmin-like mitochondrial-lipid-binding domain |
JGI | N/A | IEA |
Proteins Associated with Glyma.17g109500
| Locus | Gene Symbol | Protein Name |
|---|
| | C2-153 | C2 domain containing protein gene 153 |
Gene model name correspondences to Glyma.17g109500 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma17g11800 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.17g109500
>Glyma.17g109500.1 sequence-type=CDS polypeptide=Glyma.17g109500.1.p locus=Glyma.17g109500 id=Glyma.17g109500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGCTTCATTTTCGGAGTGGTGGTCGGAATAATTGTGGGCCTGGCCATCATAGTGGGCTTCGTCCGCGGCGAGAACTCCCGGGCCGCCCAACGCTCCCAGCTCGCCACCACCGTTGCCGCCTTCGCTCGGATGACCGTCGAAGATTCCAGAAAGATCTTGCCGCCTCAGTTCTACCCTTCCTGGGTCGTTTTCTCTTCCAGCCAGAAGTTAACTTGGCTTAACTCGCATCTCACCAAGATCTGGCCCTATGTTAACGAGGCTGCTTCTGAGCTCATAAAAGCGTCGGTGGAACCTATTCTGGAAGAATATAGACCCGTGGTTTTGGCGGCTCTTAAATTTTCCAAGTTTACTCTTGGTACTGTAGCTCCACAGTTTACAGGCGTGTCTATAATTGAGGATGGAGGGGATGGTGTTACAATGGAGTTAGAAATGCAATGGGATGGGAACCCAAGTATTATACTTGATATTAAAACTCTTCTTGGTGTTGCACTACCGGTGCAGGTAAAAAATATTGGATTTACGGGTGTTTTTAGGTTGATCTTCAAGCCATTAGTTGATGAATTTCCTGGTTTTGGAGCTGTTAGCTATTCATTAAGGCAAAAGAAAAAGTTGGATTTTACTCTAAAAGTCATTGGTGGCGACATATCAGCAATTCCTGGATTATATGATGCAATAGAGGGGGCAATTCGGGATGCTGTTGAAGATTCTATTACATGGCCCGTGAGAAAAGTTGTACCCATTTTGCCTGGAGATTACAGTGATTTGGAGTTGAAGCCCGAGGGGATATTAGAAGTAAAGCTTGTGCAAGCAAAGGAATTAACAAACAAGGATATCATTGGAAAATCAGATCCATATGCCGTTGTATACATACGGCCTTTACGCGAAAGAATGAAGAAAAGCAAAACAATTAACAATGATTTGAATCCGATTTGGAATGAACACTTTGAATTTGTTGTTGAAGATGTGTCCACTCAGCACGTAACTGTTAAAGTTTATGATTCTGAGGGTTTACAGTCATCTGAATTGATTGGATGTGCTCAGCTACAGCTTAGTGAACTTCAACCTGGTAAAGTAAAGGATGTTTGGTTGAAGTTGGTCAAGGATTTGGAGATTCAAAGGGATACGAAGAACAGAGGGCAGGTACATTTGGAGCTCTTGTACTGTCCATTTGGCATGGAGAATAGCTTTACAAACCCATTTGCTCCCAACTACTCAATGACATCTTTGGAAAAGGTTCTTAAAAATGCGAATGGAGTAGAGTCTAATGGAAATGAAAACGCAGTTACCCAAAAGAAAAAGGAGGTTATTATTAGAGGAGTCCTTTCTGTTACTGTAATATCTGCTGAAGACTTGCCTGCAACAGATTTCATGGGGAAATCTGATCCTTTTGTTGTTCTTACCTTGAAGAAAGCAGAAACAAAAAACAAAACCAGGGTTGTGAATGACAGCTTGAATCCTGTTTGGAATCAAACATTTGACTTTGTTGTTGAGGATGGATTACATGATATGCTAATTGTTGAAGTTTGGGACCACGACACATTCGGAAAGGACTATATGGGCAGATGCATATTGACGCTTACCAGGGTAATACTGGAAGGGGAATACAAAGAACGTTTTGTGCTAGATGGAGCCAAATCTGGCTTTTTGAATTTGCATCTCAAGTGGATGCCGCAACCAATTTTCCGTGATTCTTAG
Predicted protein sequences of Glyma.17g109500
>Glyma.17g109500.1.p sequence-type=predicted peptide transcript=Glyma.17g109500.1 locus=Glyma.17g109500 id=Glyma.17g109500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGFIFGVVVGIIVGLAIIVGFVRGENSRAAQRSQLATTVAAFARMTVEDSRKILPPQFYPSWVVFSSSQKLTWLNSHLTKIWPYVNEAASELIKASVEPILEEYRPVVLAALKFSKFTLGTVAPQFTGVSIIEDGGDGVTMELEMQWDGNPSIILDIKTLLGVALPVQVKNIGFTGVFRLIFKPLVDEFPGFGAVSYSLRQKKKLDFTLKVIGGDISAIPGLYDAIEGAIRDAVEDSITWPVRKVVPILPGDYSDLELKPEGILEVKLVQAKELTNKDIIGKSDPYAVVYIRPLRERMKKSKTINNDLNPIWNEHFEFVVEDVSTQHVTVKVYDSEGLQSSELIGCAQLQLSELQPGKVKDVWLKLVKDLEIQRDTKNRGQVHLELLYCPFGMENSFTNPFAPNYSMTSLEKVLKNANGVESNGNENAVTQKKKEVIIRGVLSVTVISAEDLPATDFMGKSDPFVVLTLKKAETKNKTRVVNDSLNPVWNQTFDFVVEDGLHDMLIVEVWDHDTFGKDYMGRCILTLTRVILEGEYKERFVLDGAKSGFLNLHLKWMPQPIFRDS*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
