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A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G34850.1 | AT | purple acid phosphatase 26 | JGI | N/A | IEA |
GO:0016311 | GO-bp | dephosphorylation | EnsemblGenomes | N/A | IEA |
GO:0016020 | GO-cc | membrane | EnsemblGenomes | N/A | IEA |
GO:0016021 | GO-cc | integral component of membrane | EnsemblGenomes | N/A | IEA |
GO:0003993 | GO-mf | acid phosphatase activity | EnsemblGenomes | N/A | IEA |
GO:0016787 | GO-mf | hydrolase activity | EnsemblGenomes | N/A | IEA |
GO:0016787 | GO-mf | hydrolase activity | JGI | N/A | IEA |
GO:0046872 | GO-mf | metal ion binding | EnsemblGenomes | N/A | IEA |
KOG1378 | KOG | Purple acid phosphatase | JGI | N/A | IEA |
PTHR22953 | Panther | ACID PHOSPHATASE RELATED | JGI | N/A | IEA |
PF00149 | PFAM | Calcineurin-like phosphoesterase | JGI | N/A | IEA |
PWY-6348 | SoyCyc9 | phosphate acquisition | Plant Metabolic Network | ISS | |
GN7V-42958 | SoyCyc9-rxn | 6-phosphogluconate phosphatase | Plant Metabolic Network | ISS |
Locus | Gene Symbol | Protein Name |
---|---|---|
PAP3 | purple acid phosphatase-like protein |
Glyma.17g109400 not represented in the dataset |
Glyma.17g109400 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Paralog | Evidence | Comments |
---|---|---|
Glyma.13g161900 | IGC | Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35. |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma17g11790 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.17g109400.2 sequence-type=transcript locus=Glyma.17g109400 ID=Glyma.17g109400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 CAGAAATTAAACTAAAATCAATGAGAGATGGTGGTGGACCAAATGCATTAATACACGTGCGCACCAACCTCTTCCCTTCCCTTCAAATTCAATCAATCGATTTATCGCTCTTTTATGTGGTTGGCTTCCTTTCGCTCTCTTCTCTGCAAATGCTTCATTCCAAGATGGTTAGGACTCTGTAGGCTGATAAAGACAACACTCATACCGTTGGAAAGAAGGATGCTGCTGGCCATGTTGCTTAATTTAGTTCTTGCTTCCTTTGTCTTCTTGAGTTTTATCAGAGACGGGAGTGCAGGGATCACTAGCTCTTTCATTCGGTCAGAGTGGCCGGCAGTTGACATCCCCCTTGATCATGAAGCATTTGCAGTTCCAAAGGGTTATAATGCACCTCAACAAGTGCACATCACGCAAGGTGACTATGATGGAAAAGCAGTAATCATCTCATGGGTGACCACAGAAGAGCCAGGGCACAGCCATATACAGTATGGCACATCAGAGAATAAATTTCAAACTAGTGAAGAAGGCACAGTTACAAACTATACTTTCCACAAATACAAGTCTGGCTACATTCATCACTGTCTTATTGAAGGCCTTGAGTATGAGACTAAATACTACTATAGAATTGGAAGTGGTGATTCTTCTCGAGAATTTTGGTTCAAAACACCTCCCAAAGTTGATCCAGATTCTCCCTACAAATTTGGGATCATTGGTGATTTGGGGCAAACGTTTAATTCTCTTTCCACCCTTGAGCATTATATACAAAGTGGAGCGCAGACTGTCTTATTTGTTGGAGATCTTTCTTATGCTGATAGGTACCAGTACAATGATGTTGGTTTACGGTGGGATACATGGGGACGATTTGTTGAAAGGAGTACAGCATATCATCCATGGTTATGGTCTGCTGGAAATCACGAAATAGACTATATGCCTTACATGGGAGAAGTTGTTCCTTTCAAAAACTATCTTTACCGATATACTACTCCCTACTTGGCCTCCAATAGCTCCAGTCCCCTCTGGTATGCAGTCAGGCGTGCGTCTGCTCATATAATTGTGCTATCCAGCTATTCACCATTCGTGAAATACACTCCTCAATACATGTGGCTTAAAGAAGAGCTGAAGCGAGTTGAGAGGGAGAAGACTCCTTGGCTCATTGTGCTCATGCACGTGCCGCTCTACAATAGTAATGGAGCTCACTATATGGAGGGTGAAAGCATGCGATCTGTTTTTGAGAGCTGGTTCATCGAGTACAAAGTTGATGTGATCTTTGCTGGCCATGTCCATGCTTATGAAAGATCAGCGGTAACAGGTATCCATTACCTAACAAATCAGCACCTGTTTACATAACAGTCGGAGATGGTGGAAATCAAGAAGGTCTTGCTTCAAGGTTTTTGGATCCACAGCCAGAATATTCTGCTTTTCGAGAAGCAAGCTACGGACATTCCACACTGGAGATAAAAAATAGGACCCATGCTATCTACCACTGGAATCGCAATGATGATGGCAAGAAAGTACCGACTGACTCTTTTGTACTGCATAATCAGTACTGGGGACACAATCGCAGAAGAAGAAAACTGAAGCATTTTCTATTGAAAGTTATTGATGAAGTTGCCAGCATGTAATTTGAAGTTGAAGCACTAGCATATTTGGCGTTTTGAAAAGGATAAAAATGTGCCCCTTGATTAATATATGCAGTTCAATAGTGTCTGAGTGAGCGAAATGCAGGACGTTGGAAATGGTTCTATGTACTATTTGGCTTGTATGCTTGTATTACAACGCTAATAAGAATATTAAATGAGCTTGCTGGAGAAAAATAAAATAAGAACATATTATCTATTGATTGGAAATGGTTCCATTTCAGTGATTT >Glyma.17g109400.3 sequence-type=transcript locus=Glyma.17g109400 ID=Glyma.17g109400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 CAGAAATTAAACTAAAATCAATGAGAGATGGTGGTGGACCAAATGCATTAATACACGTGCGCACCAACCTCTTCCCTTCCCTTCAAATTCAATCAATCGATTTATCGCTCTTTTATGTGGTTGGCTTCCTTTCGCTCTCTTCTCTGCAAATGCTTCATTCCAAGATGGTTAGGACTCTGTAGGCTGATAAAGACAACACTCATACCGTTGGAAAGAAGGATGCTGCTGGCCATGTTGCTTAATTTAGTTCTTGCTTCCTTTGTCTTCTTGAGTTTTATCAGAGACGGGAGTGCAGGGATCACTAGCTCTTTCATTCGGTCAGAGTGGCCGGCAGTTGACATCCCCCTTGATCATGAAGCATTTGCAGTTCCAAAGGGTTATAATGCACCTCAACAAGTGCACATCACGCAAGGTGACTATGATGGAAAAGCAGTAATCATCTCATGGGTGACCACAGAAGAGCCAGGGCACAGCCATATACAGTATGGCACATCAGAGAATAAATTTCAAACTAGTGAAGAAGGCACAGTTACAAACTATACTTTCCACAAATACAAGTCTGGCTACATTCATCACTGTCTTATTGAAGGCCTTGAGTATGAGACTAAATACTACTATAGAATTGGAAGTGGTGATTCTTCTCGAGAATTTTGGTTCAAAACACCTCCCAAAGTTGATCCAGATTCTCCCTACAAATTTGGGATCATTGGTGATTTGGGGCAAACGTTTAATTCTCTTTCCACCCTTGAGCATTATATACAAAGTGGAGCGCAGACTGTCTTATTTGTTGGAGATCTTTCTTATGCTGATAGGTACCAGTACAATGATGTTGGTTTACGGTGGGATACATGGGGACGATTTGTTGAAAGGAGTACAGCATATCATCCATGGTTATGGTCTGCTGGAAATCACGAAATAGACTATATGCCTTACATGGGAGAAGTTGTTCCTTTCAAAAACTATCTTTACCGATATACTACTCCCTACTTGGCCTCCAATAGCTCCAGTCCCCTCTGGTATGCAGTCAGGCGTGCGTCTGCTCATATAATTGTGCTATCCAGCTATTCACCATTCGTGAAATACACTCCTCAATACATGTGGCTTAAAGAAGAGCTGAAGCGAGTTGAGAGGGAGAAGACTCCTTGGCTCATTGTGCTCATGCACGTGCCGCTCTACAATAGTAATGGAGCTCACTATATGGAGGGTGAAAGCATGCGATCTGTTTTTGAGAGCTGGTTCATCGAGTACAAAGTTGATGTGATCTTTGCTGGCCATGTCCATGCTTATGAAAGATCATATCGATACTCTAATGTTGACTACAACATAACAGGCGGTAACAGGTATCCATTACCTAACAAATCAGCACCTGTTTACATAACAGTCGGAGATGGTGGAAATCAAGAAGGTCTTGCTTCAAGGTTTTTGGATCCACAGCCAGAATATTCTGCTTTTCGAGAAGCAAGCTACGGACATTCCACACTGGAGATAAAAAATAGGACCCATGCTATCTACCACTGGAATCGCAATGATGATGGCAAGAAAGTACCGACTGACTCTTTTGTACTGCATAATCAGTACTGGTAGGTTCCCTCCACCTTTTGCTTGGGCATTGCTTTCAAGTAGCAGGGAGAAATATGCCATATCTTGCTGTTGTGATGAACTATAAGATTGAAAGTTATCATTGCATCCAAATGGCAAGGCACAATATAGACATTCTCTGCCACATGCGTTTTTACTGAAGATAATAATGCTAGAAGTTTAAAATCGTTATGGCCTACATTCCGATAGTAATTTTGAGGGTTGGTTTTTGTGATATTTTCTTCTTCGTAAATGTTGAGAAGGGTACAAAGAAACTTCCTT
>Glyma.17g109400.1 sequence-type=CDS polypeptide=Glyma.17g109400.1.p locus=Glyma.17g109400 ID=Glyma.17g109400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGTGGTTGGCTTCCTTTCGCTCTCTTCTCTGCAAATGCTTCATTCCAAGATGGTTAGGACTCTGTAGGCTGATAAAGACAACACTCATACCGTTGGAAAGAAGGATGCTGCTGGCCATGTTGCTTAATTTAGTTCTTGCTTCCTTTGTCTTCTTGAGTTTTATCAGAGACGGGAGTGCAGGGATCACTAGCTCTTTCATTCGGTCAGAGTGGCCGGCAGTTGACATCCCCCTTGATCATGAAGCATTTGCAGTTCCAAAGGGTTATAATGCACCTCAACAAGTGCACATCACGCAAGGTGACTATGATGGAAAAGCAGTAATCATCTCATGGGTGACCACAGAAGAGCCAGGGCACAGCCATATACAGTATGGCACATCAGAGAATAAATTTCAAACTAGTGAAGAAGGCACAGTTACAAACTATACTTTCCACAAATACAAGTCTGGCTACATTCATCACTGTCTTATTGAAGGCCTTGAGTATGAGACTAAATACTACTATAGAATTGGAAGTGGTGATTCTTCTCGAGAATTTTGGTTCAAAACACCTCCCAAAGTTGATCCAGATTCTCCCTACAAATTTGGGATCATTGGTGATTTGGGGCAAACGTTTAATTCTCTTTCCACCCTTGAGCATTATATACAAAGTGGAGCGCAGACTGTCTTATTTGTTGGAGATCTTTCTTATGCTGATAGGTACCAGTACAATGATGTTGGTTTACGGTGGGATACATGGGGACGATTTGTTGAAAGGAGTACAGCATATCATCCATGGTTATGGTCTGCTGGAAATCACGAAATAGACTATATGCCTTACATGGGAGAAGTTGTTCCTTTCAAAAACTATCTTTACCGATATACTACTCCCTACTTGGCCTCCAATAGCTCCAGTCCCCTCTGGTATGCAGTCAGGCGTGCGTCTGCTCATATAATTGTGCTATCCAGCTATTCACCATTCGTGAAATACACTCCTCAATACATGTGGCTTAAAGAAGAGCTGAAGCGAGTTGAGAGGGAGAAGACTCCTTGGCTCATTGTGCTCATGCACGTGCCGCTCTACAATAGTAATGGAGCTCACTATATGGAGGGTGAAAGCATGCGATCTGTTTTTGAGAGCTGGTTCATCGAGTACAAAGTTGATGTGATCTTTGCTGGCCATGTCCATGCTTATGAAAGATCATATCGATACTCTAATGTTGACTACAACATAACAGGCGGTAACAGGTATCCATTACCTAACAAATCAGCACCTGTTTACATAACAGTCGGAGATGGTGGAAATCAAGAAGGTCTTGCTTCAAGGTTTTTGGATCCACAGCCAGAATATTCTGCTTTTCGAGAAGCAAGCTACGGACATTCCACACTGGAGATAAAAAATAGGACCCATGCTATCTACCACTGGAATCGCAATGATGATGGCAAGAAAGTACCGACTGACTCTTTTGTACTGCATAATCAGTACTGGGGACACAATCGCAGAAGAAGAAAACTGAAGCATTTTCTATTGAAAGTTATTGATGAAGTTGCCAGCATGTAA >Glyma.17g109400.2 sequence-type=CDS polypeptide=Glyma.17g109400.2.p locus=Glyma.17g109400 ID=Glyma.17g109400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGTGGTTGGCTTCCTTTCGCTCTCTTCTCTGCAAATGCTTCATTCCAAGATGGTTAGGACTCTGTAGGCTGATAAAGACAACACTCATACCGTTGGAAAGAAGGATGCTGCTGGCCATGTTGCTTAATTTAGTTCTTGCTTCCTTTGTCTTCTTGAGTTTTATCAGAGACGGGAGTGCAGGGATCACTAGCTCTTTCATTCGGTCAGAGTGGCCGGCAGTTGACATCCCCCTTGATCATGAAGCATTTGCAGTTCCAAAGGGTTATAATGCACCTCAACAAGTGCACATCACGCAAGGTGACTATGATGGAAAAGCAGTAATCATCTCATGGGTGACCACAGAAGAGCCAGGGCACAGCCATATACAGTATGGCACATCAGAGAATAAATTTCAAACTAGTGAAGAAGGCACAGTTACAAACTATACTTTCCACAAATACAAGTCTGGCTACATTCATCACTGTCTTATTGAAGGCCTTGAGTATGAGACTAAATACTACTATAGAATTGGAAGTGGTGATTCTTCTCGAGAATTTTGGTTCAAAACACCTCCCAAAGTTGATCCAGATTCTCCCTACAAATTTGGGATCATTGGTGATTTGGGGCAAACGTTTAATTCTCTTTCCACCCTTGAGCATTATATACAAAGTGGAGCGCAGACTGTCTTATTTGTTGGAGATCTTTCTTATGCTGATAGGTACCAGTACAATGATGTTGGTTTACGGTGGGATACATGGGGACGATTTGTTGAAAGGAGTACAGCATATCATCCATGGTTATGGTCTGCTGGAAATCACGAAATAGACTATATGCCTTACATGGGAGAAGTTGTTCCTTTCAAAAACTATCTTTACCGATATACTACTCCCTACTTGGCCTCCAATAGCTCCAGTCCCCTCTGGTATGCAGTCAGGCGTGCGTCTGCTCATATAATTGTGCTATCCAGCTATTCACCATTCGTGAAATACACTCCTCAATACATGTGGCTTAAAGAAGAGCTGAAGCGAGTTGAGAGGGAGAAGACTCCTTGGCTCATTGTGCTCATGCACGTGCCGCTCTACAATAGTAATGGAGCTCACTATATGGAGGGTGAAAGCATGCGATCTGTTTTTGAGAGCTGGTTCATCGAGTACAAAGTTGATGTGATCTTTGCTGGCCATGTCCATGCTTATGAAAGATCAGCGGTAACAGGTATCCATTACCTAACAAATCAGCACCTGTTTACATAA >Glyma.17g109400.3 sequence-type=CDS polypeptide=Glyma.17g109400.3.p locus=Glyma.17g109400 ID=Glyma.17g109400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGTGGTTGGCTTCCTTTCGCTCTCTTCTCTGCAAATGCTTCATTCCAAGATGGTTAGGACTCTGTAGGCTGATAAAGACAACACTCATACCGTTGGAAAGAAGGATGCTGCTGGCCATGTTGCTTAATTTAGTTCTTGCTTCCTTTGTCTTCTTGAGTTTTATCAGAGACGGGAGTGCAGGGATCACTAGCTCTTTCATTCGGTCAGAGTGGCCGGCAGTTGACATCCCCCTTGATCATGAAGCATTTGCAGTTCCAAAGGGTTATAATGCACCTCAACAAGTGCACATCACGCAAGGTGACTATGATGGAAAAGCAGTAATCATCTCATGGGTGACCACAGAAGAGCCAGGGCACAGCCATATACAGTATGGCACATCAGAGAATAAATTTCAAACTAGTGAAGAAGGCACAGTTACAAACTATACTTTCCACAAATACAAGTCTGGCTACATTCATCACTGTCTTATTGAAGGCCTTGAGTATGAGACTAAATACTACTATAGAATTGGAAGTGGTGATTCTTCTCGAGAATTTTGGTTCAAAACACCTCCCAAAGTTGATCCAGATTCTCCCTACAAATTTGGGATCATTGGTGATTTGGGGCAAACGTTTAATTCTCTTTCCACCCTTGAGCATTATATACAAAGTGGAGCGCAGACTGTCTTATTTGTTGGAGATCTTTCTTATGCTGATAGGTACCAGTACAATGATGTTGGTTTACGGTGGGATACATGGGGACGATTTGTTGAAAGGAGTACAGCATATCATCCATGGTTATGGTCTGCTGGAAATCACGAAATAGACTATATGCCTTACATGGGAGAAGTTGTTCCTTTCAAAAACTATCTTTACCGATATACTACTCCCTACTTGGCCTCCAATAGCTCCAGTCCCCTCTGGTATGCAGTCAGGCGTGCGTCTGCTCATATAATTGTGCTATCCAGCTATTCACCATTCGTGAAATACACTCCTCAATACATGTGGCTTAAAGAAGAGCTGAAGCGAGTTGAGAGGGAGAAGACTCCTTGGCTCATTGTGCTCATGCACGTGCCGCTCTACAATAGTAATGGAGCTCACTATATGGAGGGTGAAAGCATGCGATCTGTTTTTGAGAGCTGGTTCATCGAGTACAAAGTTGATGTGATCTTTGCTGGCCATGTCCATGCTTATGAAAGATCATATCGATACTCTAATGTTGACTACAACATAACAGGCGGTAACAGGTATCCATTACCTAACAAATCAGCACCTGTTTACATAACAGTCGGAGATGGTGGAAATCAAGAAGGTCTTGCTTCAAGGTTTTTGGATCCACAGCCAGAATATTCTGCTTTTCGAGAAGCAAGCTACGGACATTCCACACTGGAGATAAAAAATAGGACCCATGCTATCTACCACTGGAATCGCAATGATGATGGCAAGAAAGTACCGACTGACTCTTTTGTACTGCATAATCAGTACTGGTAG
>Glyma.17g109400.1.p sequence-type=predicted peptide transcript=Glyma.17g109400.1 locus=Glyma.17g109400 ID=Glyma.17g109400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MWLASFRSLLCKCFIPRWLGLCRLIKTTLIPLERRMLLAMLLNLVLASFVFLSFIRDGSAGITSSFIRSEWPAVDIPLDHEAFAVPKGYNAPQQVHITQGDYDGKAVIISWVTTEEPGHSHIQYGTSENKFQTSEEGTVTNYTFHKYKSGYIHHCLIEGLEYETKYYYRIGSGDSSREFWFKTPPKVDPDSPYKFGIIGDLGQTFNSLSTLEHYIQSGAQTVLFVGDLSYADRYQYNDVGLRWDTWGRFVERSTAYHPWLWSAGNHEIDYMPYMGEVVPFKNYLYRYTTPYLASNSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQYMWLKEELKRVEREKTPWLIVLMHVPLYNSNGAHYMEGESMRSVFESWFIEYKVDVIFAGHVHAYERSYRYSNVDYNITGGNRYPLPNKSAPVYITVGDGGNQEGLASRFLDPQPEYSAFREASYGHSTLEIKNRTHAIYHWNRNDDGKKVPTDSFVLHNQYWGHNRRRRKLKHFLLKVIDEVASM* >Glyma.17g109400.2.p sequence-type=predicted peptide transcript=Glyma.17g109400.2 locus=Glyma.17g109400 ID=Glyma.17g109400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 MWLASFRSLLCKCFIPRWLGLCRLIKTTLIPLERRMLLAMLLNLVLASFVFLSFIRDGSAGITSSFIRSEWPAVDIPLDHEAFAVPKGYNAPQQVHITQGDYDGKAVIISWVTTEEPGHSHIQYGTSENKFQTSEEGTVTNYTFHKYKSGYIHHCLIEGLEYETKYYYRIGSGDSSREFWFKTPPKVDPDSPYKFGIIGDLGQTFNSLSTLEHYIQSGAQTVLFVGDLSYADRYQYNDVGLRWDTWGRFVERSTAYHPWLWSAGNHEIDYMPYMGEVVPFKNYLYRYTTPYLASNSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQYMWLKEELKRVEREKTPWLIVLMHVPLYNSNGAHYMEGESMRSVFESWFIEYKVDVIFAGHVHAYERSAVTGIHYLTNQHLFT* >Glyma.17g109400.3.p sequence-type=predicted peptide transcript=Glyma.17g109400.3 locus=Glyma.17g109400 ID=Glyma.17g109400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 MWLASFRSLLCKCFIPRWLGLCRLIKTTLIPLERRMLLAMLLNLVLASFVFLSFIRDGSAGITSSFIRSEWPAVDIPLDHEAFAVPKGYNAPQQVHITQGDYDGKAVIISWVTTEEPGHSHIQYGTSENKFQTSEEGTVTNYTFHKYKSGYIHHCLIEGLEYETKYYYRIGSGDSSREFWFKTPPKVDPDSPYKFGIIGDLGQTFNSLSTLEHYIQSGAQTVLFVGDLSYADRYQYNDVGLRWDTWGRFVERSTAYHPWLWSAGNHEIDYMPYMGEVVPFKNYLYRYTTPYLASNSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQYMWLKEELKRVEREKTPWLIVLMHVPLYNSNGAHYMEGESMRSVFESWFIEYKVDVIFAGHVHAYERSYRYSNVDYNITGGNRYPLPNKSAPVYITVGDGGNQEGLASRFLDPQPEYSAFREASYGHSTLEIKNRTHAIYHWNRNDDGKKVPTDSFVLHNQYW*
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