Glyma.17g104100

Report for Sequence Feature Glyma.17g104100

Feature Type:	gene_model
Chromosome:	Gm17
Start:	8158079
stop:	8180086
Source:	JGI
Version:	Wm82.a4.v1
High confidence:	yes

Annotations for Glyma.17g104100

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G20320.1	AT	ATDCL4,DCL4	JGI	N/A	IEA
3.1.26.3	EC	ribonuclease III	JGI	N/A	IEA
GO:0006396	GO-bp	RNA processing	JGI	N/A	IEA
GO:0003677	GO-mf	DNA binding	JGI	N/A	IEA
GO:0003723	GO-mf	RNA binding	JGI	N/A	IEA
GO:0004525	GO-mf	ribonuclease III activity	JGI	N/A	IEA
GO:0005515	GO-mf	protein binding	JGI	N/A	IEA
GO:0005524	GO-mf	ATP binding	JGI	N/A	IEA
GO:0016787	GO-mf	hydrolase activity	JGI	N/A	IEA
GO:0016891	GO-mf	endoribonuclease activity, producing 5'-phosphomonoesters	JGI	N/A	IEA
K11592	KEGG	Chromosome and associated proteins	JGI	N/A	IEA
KOG0701	KOG	dsRNA-specific nuclease Dicer and related ribonucleases	JGI	N/A	IEA
PTHR14950	PantherFam	DICER-RELATED	JGI	N/A	IEA
PTHR14950:SF15	PantherFam	DRBM DOMAIN-CONTAINING PROTEIN-RELATED	JGI	N/A	IEA
PF00271	Pfam	Helicase conserved C-terminal domain	JGI	N/A	IEA
PF00636	Pfam	Ribonuclease III domain	JGI	N/A	IEA
PF02170	Pfam	PAZ domain	JGI	N/A	IEA
PF03368	Pfam	Dicer dimerisation domain	JGI	N/A	IEA
PF04851	Pfam	Type III restriction enzyme, res subunit	JGI	N/A	IEA
PF14709	Pfam	double strand RNA binding domain from DEAD END PROTEIN 1	JGI	N/A	IEA

Gene model name correspondences to Glyma.17g104100 Gene Call Version Wm82.a4.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma17g11235	Wm82.a1.v1.1	IGC	As supplied by JGI

Coding sequences of Glyma.17g104100

Limit To All Plant Sequences

>Glyma.17g104100.1 sequence-type=CDS polypeptide=Glyma.17g104100.1.p locus=Glyma.17g104100 id=Glyma.17g104100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCGGACGGAGAATCCTCCGTCGTCGTCGCCGGCGGCCAAGCTTCCATGGAACCCTCCTTAAGCGTCTCCAATCAACTGCAGTCCCTGAGTCTTTCCCAAGACAAAAACCATGATGACTCAGTCAAGAAAGATCCCCGGAAAATTGCAAGAAAGTATCAGTTGGAGTTATGCAAAAAAGCTATGGAGGAAAATATAATTGTGTATTTAGGGACAGGGTGTGGGAAGACCCACATTGCTGTGCTTCTTATGTATGGGATGGGTCATTTGATTCGGAAACCGCAGAAGAACATATGTGTCTTTCTTGCCCCTACTGTGGCTTTAGTCCATCAGCAAGCAAAGGTTATAGCAGACTCTACTAATTTTAAGGTTGGGACATACTGTGGAAGTTCCAAGCGCTTGAAACGTCATCAAGACTGGGAGCAGGAGATTGGACAATATGAGGTTCTTGTTATGACCCCACAAATATTACTTCATAACTTATCTCATTGCTTCATCACAATGGAGATGATTGCACTTTTGATATTTGATGAATGCCATCATGCTCAAGTCAAAAGCAACCATGCTTATGCAGTTATCATGAAAGTCTTCTACAAAAGTAATTCCTCAAAGGTTCCCCGTATATTTGGCATGACTGCTTCCCCTGTTGTAGGAAAAGGTGCTTCTAGTGAAGCAAATCTAGCAAAAAGCATCAATAGTCTTGAACATATACTTGATGCTAAGGTATACTCTGTTGAAGACAAGGAATTGCAATCTTTTGTGACCACTCCTGTGATTAATATATATCATTATGTTTCAACTGCAAGTGGGGAAACTAGCTTGTACCTGAAAATTGAGGAGATTAAACGCCAGTGCATAGCAAACCTTGGTAGGAGTATAGAAGATCACCAGAAAAGGATGAATGCAAAGAAACTTCTGAACCGGATGCATGATAATGTGATTTTCGGTCTGCAGAATCTTGGCATTTGGGGAGCATTGCAAGCTAGTCATATTCTTCTGAGTGGTGATCGTTCTGAGAGGCATGAGTTAGTGGAGGCTGAAGGAAATTCAAGTGATGACTCTCTGTGTGATAAATATCTTGCTCAGGCTGCTGAACTGTTTACTTCACAATGCATGATAGGCGACAGGGTAACTGATTTATCTTCTGTGGAAATATTAAAAGAGCCATTTTTCTCAGCAAAGCTTTTACGACTCATTGGGATATTATCCAACTTTAGGTTGCAAAAGAACATGAAATGTATAATTTTTGTGAATAGAATTGTGACAGCAAGATCCCTGTCATACATTCTACAGAAGCTCAAGCTTCTAAGACAATGGAGGAGTGATTTCCTAGTAGGAGTCCATGCTGGACTGAAGAGTATGTCACGAAAGACCATGAACATCATTGTTGATAAGTTTCGCTCTGGAGAGTTGAATCTACTGGTTGCAACCAAAGTGGGTGAAGAAGGACTTGACATTCAGACGTGTTGCCTCGTCATACGATTTGATCTTCCAGAAACTGTTGCCAGCTTTATACAGTCAAGAGGTCGTGCACGTATGCCTCAGTCAGAATATGCATTTTTGGTGGACAGTGGCAATAAGAAGGAACTTGACATAATTGATGGCTTTGAGAAAGATGAATACCGAATGAATATGGAAATTACTTTTCGAACATCCAAGGAGACATACATAATCCCTGAGGAAAGAATATTCAGAGTTGATTCGTCTGGTGCTTCTGTTAGTTCTGGATATAGTATCTCATTGCTTCACCAGTATTGTTCAAAGCTTCCACATGATGAGTACTTTGACCCCAAGCCATGTTTTTATTACTTAGATGATTCAGGGGGGATTTCCTGCCATATAACATTGCCTTCCAATGCACCAATAAACCAAATTTTAGGTACACCACAGTTGTCTATGGAGGCTTCCAAAAGAGATGCTTGCCTGAAAGCAATAGAAGAACTGTATAATTTAGGCACTTTAAGTGATTGTCTCTTGCCAAAACAAGATGATGCAGAGCCAGAGGCGCAGGTTTCAGGCTCTTCTGATGAAGATGAATGTGAAGATGCCATATCAAGAGGAGAATTACATGAGATGCTAGTTCCTTCTGCCTTTGGACAGTCATGGATAAATGAGGATAACATCGTCCGTCTCAACTCTTACTACATAAAATTTTGTCCCTATCCAGAGGATAGGGTCTACAAAGAGTTTGGTCTTTTCATCATGGTTCGGCTTCCAATGGAGGCTGAGAAATTGGAACTTGATCTCCATCTTGCTCATGGTCGATCTGTGATGACAAAATTTGTCCCATTTGGAGTTGTAGAATTTGACAAAGATGAGATTAAGATGGCAGAGAATTTTCAAGAAATGTTCCTCAAAATTATTCTTGATAGATTAGAATTCGTTTCTGAGTTTGTAGACTTGGGTATGGGTGCTGAATCTCACACAGGCACATCAACCTTCTACCTTTTGCTTCCAGTTGTATTGCAAGAATATGGAAATGCCATGAAAGTAGACTGGAAGACTGTGAAGAGATGCCTTTGTTCACCAATTTTCAGGCATCCAGCTGATACTATGGATAAAAAAGTTTTCCCTTTAGATATTCACCTGCAACTTGCCAATGGTTACAGAAGTGTAAGAGATGTCGAGAATAGTTTAGTGTATGCCCCACATAAGAAGAACTTTTATTTTGTCACGAATGTTAACTACCAAAAGAATGGATATAGTCCTCATAATGATTCAGGCACTTCAAGCTATGTGGATTACTTCATTGAAAAGTTTTCCATTCACCTCAAATGTCCAGAACAACCACTTCTACATGTTAAACCAGTCTCCAATTTGCACAACCTGCTACACAACCGAAAGCATGAGGATGCAGAACCACAGGAGCTGGACGAATACTTAATTTATTTGCCTCCTGAGCTTTGTGAACTAAAAATAATAGGTTTTTCGAAGGATATTGGCAGTTCCATATCTTTGCTACCTTCAATTATGCACCGTCTTGGAAACTTGCTGGTGGCTATTGAACTAAAGCACAGGCTATCTTCTTCCTTTCCAGAGGCAGCTGAAATTAGTGCCCTTAGAGTTTTAGAAGCTCTCACTACTGAGAAGTGTCAGGAGCGCTTTTCCCTTGAAAGACTTGAAGTGCTTGGTGATGCTTTTCTTAAATTTGCTGTTGCACGTCATTTTTTTCTCATGCATGACAGCCTTCATGAAGGAGACCTTACAAAAAGGCGCTCCAACGCTGTGAATAATTCCAATCTGTTTAAGTTGGCTATCAAGCGCAATTTGCAGGTCTATATATGCGATCAGACATTTGATCCCACTCAGTTTTATGCATTAGGCCGTCCTTGCCCAAGACTTTGTAGCAATGAAACCAAAGAAAGCATACACTTCTGTTTAAATTCTGTTAAGGAACAAGGAAAAGTAACTGAAACCCAATGTAACAAAAATCATCATTGGTTACATAGGAAAACAATTGCTGATGTGGTTGAAGCTCTGGTTGGAGCATTTCTAGTTGACAGTGGCTTTAAAGCTGCAATTGCTTTTCTTTCATGGATTGGCATTCAAGTTGATTTTGAAGCTTCACAAGTGGTTGATATTTGCATAGCAAGTGCTAGTTATTTACCTCTTTCTTCTGAAGTAGACATTCCTTCTCTTGAAGGTAAGCTAGGACATCACTTTTTTCATAAGGGCCTGCTTCTCCAGGCATTTGTACATCCTTCTTACAATAAGCTTGGAGGAGGCTGTTATCAGCGATTGGAGTTTCTTGGAGATGCTGTCTTGGATTATTTGATTACTTCATATGTATTCTCAGCTTATCCCAAACTAAAGCCTGGTCAATTGACAGATTTGAGATCATTGTCTGTTAACAACAAGGCATTTGCTTGTCTAGCGGTAGATCGCAGTTTTGATAAATTTCTTTTATGTGATTCAAGTGGCCTGTCTGAGGCAATAAAAAAGTATGTTGACTACATTAGAAGACCTGTATCAGATAACAGCATTAAAGAAGGGCCAAAATGTCCCAAGGCACTGGGTGACTTAGTGGAATCTTGTGTTGGTGCCATCCTTCTTGATTCAGGGTTCAATTTGAACAAAGTTTGGAAGATTATGACTTCGTTCTTGGACTCAATCATGAAATTCTCATCAAGCTTGCAGCTCAGTCCTGTTAGGGATTTGCGAGAACTTTGCCAATCTCATAATATGGAGTTGGAGTTTCTGCCAGTGCCCTCAAAATTGACTAAAAGGTTTTCAGTTGAAGCTAAAGTGAGTGGGAATGGTGTATGTGAAACAGCTTCAGCAACTGGTCAAAATAAAAAAGAGGCTTGCAGAATTGCTTCACTGCTACTTTTTTCAAAGTTCAAGGCTCAAGGCTGGAAAGCAAAGTCAAAAACTTTGGAAGAAGTTCTGGAATCAACTTCTAAAATGGAACCAAAACTTATTGGCTATGATGAGACTCCCATTGATGTAACAGATACCAATAAACACATAGTGGTTAATGCAGACCCATACAACAAGTCTAACCCAGAAATTCGCCCTATGCAAGAGACAGATGAAATATGCTCTCCATGTGTGAAACCTTTCGGCCAACGGCTTCAATCTTCTGCTAAGGGAAAGCTTAGTCAAATATTTGAAAATCGTGATTGCAGCAGTGACTTGTCAGGGACAGGAACGGCAAGATCACGATTGTATGAATTATGTGCTTCTTATTGTTGGAAACCTCCTTCATTTGAATGCTGCAAGGCAGAGGGACCTGACCACCTGAAACAATTCACTTGCAAGGTGACCTTAGAGATAGAAGAGGCCCAGAATTTGATTTTAGAGTTTGTTGGGGAACCTCTTTCAAAGAAGAAAGATGCAGCAGAGAGTGCGGCAGAGGGTGCATTTTGGTATCTACAACATGAAGGTTACTTGCCTAGTAGTGGTAATTGA

Predicted protein sequences of Glyma.17g104100

Limit To All Plant Sequences

>Glyma.17g104100.1.p sequence-type=predicted peptide transcript=Glyma.17g104100.1 locus=Glyma.17g104100 id=Glyma.17g104100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPDGESSVVVAGGQASMEPSLSVSNQLQSLSLSQDKNHDDSVKKDPRKIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLMYGMGHLIRKPQKNICVFLAPTVALVHQQAKVIADSTNFKVGTYCGSSKRLKRHQDWEQEIGQYEVLVMTPQILLHNLSHCFITMEMIALLIFDECHHAQVKSNHAYAVIMKVFYKSNSSKVPRIFGMTASPVVGKGASSEANLAKSINSLEHILDAKVYSVEDKELQSFVTTPVINIYHYVSTASGETSLYLKIEEIKRQCIANLGRSIEDHQKRMNAKKLLNRMHDNVIFGLQNLGIWGALQASHILLSGDRSERHELVEAEGNSSDDSLCDKYLAQAAELFTSQCMIGDRVTDLSSVEILKEPFFSAKLLRLIGILSNFRLQKNMKCIIFVNRIVTARSLSYILQKLKLLRQWRSDFLVGVHAGLKSMSRKTMNIIVDKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNKKELDIIDGFEKDEYRMNMEITFRTSKETYIIPEERIFRVDSSGASVSSGYSISLLHQYCSKLPHDEYFDPKPCFYYLDDSGGISCHITLPSNAPINQILGTPQLSMEASKRDACLKAIEELYNLGTLSDCLLPKQDDAEPEAQVSGSSDEDECEDAISRGELHEMLVPSAFGQSWINEDNIVRLNSYYIKFCPYPEDRVYKEFGLFIMVRLPMEAEKLELDLHLAHGRSVMTKFVPFGVVEFDKDEIKMAENFQEMFLKIILDRLEFVSEFVDLGMGAESHTGTSTFYLLLPVVLQEYGNAMKVDWKTVKRCLCSPIFRHPADTMDKKVFPLDIHLQLANGYRSVRDVENSLVYAPHKKNFYFVTNVNYQKNGYSPHNDSGTSSYVDYFIEKFSIHLKCPEQPLLHVKPVSNLHNLLHNRKHEDAEPQELDEYLIYLPPELCELKIIGFSKDIGSSISLLPSIMHRLGNLLVAIELKHRLSSSFPEAAEISALRVLEALTTEKCQERFSLERLEVLGDAFLKFAVARHFFLMHDSLHEGDLTKRRSNAVNNSNLFKLAIKRNLQVYICDQTFDPTQFYALGRPCPRLCSNETKESIHFCLNSVKEQGKVTETQCNKNHHWLHRKTIADVVEALVGAFLVDSGFKAAIAFLSWIGIQVDFEASQVVDICIASASYLPLSSEVDIPSLEGKLGHHFFHKGLLLQAFVHPSYNKLGGGCYQRLEFLGDAVLDYLITSYVFSAYPKLKPGQLTDLRSLSVNNKAFACLAVDRSFDKFLLCDSSGLSEAIKKYVDYIRRPVSDNSIKEGPKCPKALGDLVESCVGAILLDSGFNLNKVWKIMTSFLDSIMKFSSSLQLSPVRDLRELCQSHNMELEFLPVPSKLTKRFSVEAKVSGNGVCETASATGQNKKEACRIASLLLFSKFKAQGWKAKSKTLEEVLESTSKMEPKLIGYDETPIDVTDTNKHIVVNADPYNKSNPEIRPMQETDEICSPCVKPFGQRLQSSAKGKLSQIFENRDCSSDLSGTGTARSRLYELCASYCWKPPSFECCKAEGPDHLKQFTCKVTLEIEEAQNLILEFVGEPLSKKKDAAESAAEGAFWYLQHEGYLPSSGN*

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain