Glyma.17g094800

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Report for Sequence Feature Glyma.17g094800

Feature Type:	gene_model
Chromosome:	Gm17
Start:	7410146
stop:	7431850
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.17g094800

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G62600.1	AT	ARM repeat superfamily protein	JGI	N/A	IEA
GO:0006606	GO-bp	protein import into nucleus	EnsemblGenomes	N/A	IEA
GO:0005634	GO-cc	nucleus	EnsemblGenomes	N/A	IEA
GO:0005737	GO-cc	cytoplasm	EnsemblGenomes	N/A	IEA
GO:0031965	GO-cc	nuclear membrane	EnsemblGenomes	N/A	IEA
GO:0005488	GO-mf	binding	EnsemblGenomes	N/A	IEA
GO:0008139	GO-mf	nuclear localization sequence binding	EnsemblGenomes	N/A	IEA
GO:0008565	GO-mf	protein transporter activity	EnsemblGenomes	N/A	IEA
KOG2081	KOG	Nuclear transport regulator	JGI	N/A	IEA
PTHR12363	Panther	TRANSPORTIN 3 AND IMPORTIN 13	JGI	N/A	IEA
PTHR12363:SF19	Panther		JGI	N/A	IEA
PF08389	PFAM	Exportin 1-like protein	JGI	N/A	IEA

Expression Patterns of Glyma.17g094800

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.17g094800 not represented in the dataset	Glyma.17g094800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.17g094800

Paralog	Evidence	Comments
Glyma.05g031900	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.17g094800 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma17g10280	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.17g094800

Limit To All Plant Sequences

>Glyma.17g094800.2 sequence-type=transcript locus=Glyma.17g094800 ID=Glyma.17g094800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AACCCTTTCTCACCGGGCGCCAAAAACCCCTTTCGTGGCTTTATCAACAGGACAACAAACTTCACTCTCTCAATTTCAAACGCAGTGCCCAAATCACAACACCGAAATTGAAAAAGCTGCAGATATAAATAAATCCGAAATAGCCAGATTGAGCTTCGCTTTCGTCTTCTTCTATCGGTGCTGcgattcgattcgttccgtttcctttcgatttgaGGAGCATGGACCTTCAGAACACTGTGAAGGAAGCCCTAAATGCACTGTACCATCACCCCGATGATGCGGTGCGCATGCAAGCCGATCGCTATCTCCAGGATTTCCAGCGAACTTTGGATGCGTGGCAGGTGGCTGATAATTTACTTCATGATCCCAGTAGCAATCTAGAAACTTTGATATTTTGTTCTCAGACCTTGAGAAGCAAGGTACAAAGGGACTTTGAGGAGCTCCCTTCCACAGCTTTTCGGCCGTTGCGTGACTCATTGAATACCTTACTGAAAAAGTTCCACAAAGGTCCTCCAAAAGTCAGAACACAGATTAGCATTGCAGTGGCTGCCTTGGCTGTGCACGTGCCTGCAGAAGACTGGGGGGATGGTGGTATAGTTAAATGGCTTAGGGATGAGATGGATTCCCATCCGGAATATATACCGGGATTCTTGGAGTTACTTACAGTTCTACCGGAGGAAGTATTAAATTATAAGATTGCAGCTCGCCCAGAAAGGCGACGTCAATTTGAAAAAGAGCTTACATCTCAAATGGAAATTGCTCTTAATATCTTGACAGCATGTTTGAGTATTTCTGAACTTAAGGAGCAGGTTCTTGAGGCATTTGCTTCATGGCTTCGGCTAAAGCATGGGATTCCTGGATCAGTTCTTAGTTCTCATCCGCTAGTTCTCACTGCGTTGTCAAGCTTGAATTCTGAGTTACTTTCAGAGGCATCTGTAAATGTGATTTCCGAGTTAATACACTACACAACAGCAGGAAACATTGATGGTGTTTCTGCAAATATGCCCTTAATTCAAGTCATTGTACCTCAAGTTATGAATCTTAAAGTCCAGCTTGGTGATTCTACGAAGGACGAGGAAGATGTGAAGGCAATTGCTAGGTTATTTGCAGACATGGGTGATTCATATGTGGAACTGATTGCAACTGGTTCAGATGAATCAATGTTAATAGTGCATGCATTGTTGGAAGTTGCTTCACATCCTGAATATGATATTGCTTCTATGACTTTTAACTTTTGGCATAGTCTCCAGTTAAACTTGACTAAAAGGGAGTCCTATATTTCATATGGCAACGAAGCATGCATTGAAGCTGAGAGAAATAGAAGGCTGCAGGTTTTTCGACCTGCATATGAGTCACTTGTATCGCTGGTTATCTTTCGGGTACAGTATCCTGAAGATTATCAAGACCTTTCATACGAGGATCTTAAGGAATTTAAGCAGACTAAATATGCTGTTGCGGATGTATTAACAGATGCATCATCAGTACTTGGCGGTGATGCCACACTTAAAATTCTATACATGAAACTGCTTGAGGCTGTATCTGGCCATGGTAATAATGAACACAAGGAATGGTGTCCAGCGGAGGCTGCTTTATTTTGTATTCGGGCTATATCAAATTATGTGTCGGTTGTTGAAGCAGAAGTAATGCCTCAGATCATGGCTTTGCTTCCGAAACTTCCTCATCAACCCCAATTACTTCAAACAGTGTGTTTAACTATTGGAGCTTATTCAAAATGGCTAGATTCTGCATCTTGTGGACTGTCTGTACTGCCCTCAGTTTTAGATATCCTAATGAATGGCATGGGTACATCTGAAGAATGTGCAGCTGCTGCTGCTTTGGCATTTAGACACATCTGTGATGACTGCCGGAAAAAGCTTTGTGGATGCTTAGAAGGTCTATTCCACATCTACAACAAGACCGTTAATGGAGAAGATAGTTTCAAAGTTCCTGCTGAAGACTCTTTGCATCTGGTTGAAGCTTTGAGTATGGTTGTTACTGAACTTCCTCCAGATGATGCTAAGAGAGCTCTTGAGGCATTATGCATACCAGTCATAACTCCTTTACAGGAAGCTATCAATCAAGGTCCAGAAAGCTTGAGTAAAAGACCTTCTCGTCAGTTAACAGTTCATATTGATCGATTTGCCTACATCTTTAGATTTGTAAATCATCCTCAAGTTGTGGCAGATGCTATTCAACGGCTATGGCCAATTTTTAAGGCTATTTTTGATATTCGTGCTTGGGACATGAGAACAATGGAATCTCTCTGCCGAGCATGTAAATATGCAGTGAGAACTTCTGGAAGGTTCATGGGGCTCACAATTGGTGCCATGCTGGAAGAGATTCAGAGTCTTTATAGGCAGCACCACCAACCATGCTTTCTTTATCTCTCCAGTGAAGTTATAAAGGGAAGACTTTGGATTTGGCCCTTATTGTCGGTGCTAATTAAGTGGTAGGTGGTATTTAGAAGAGGAAAAAGAAATTCTGAGTTGATTTTAAGAAGGCCTTTGGTCATGTGCAGTCGAGCTTTCTAGATGATGTCATGGAGAGGAAAGTTTTTGGCTCTTATGTGTTCTCACTAGTAGCCATGTATC

Coding sequences of Glyma.17g094800

Limit To All Plant Sequences

>Glyma.17g094800.1 sequence-type=CDS polypeptide=Glyma.17g094800.1.p locus=Glyma.17g094800 ID=Glyma.17g094800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGACCTTCAGAACACTGTGAAGGAAGCCCTAAATGCACTGTACCATCACCCCGATGATGCGGTGCGCATGCAAGCCGATCGCTATCTCCAGGATTTCCAGCGAACTTTGGATGCGTGGCAGGTGGCTGATAATTTACTTCATGATCCCAGTAGCAATCTAGAAACTTTGATATTTTGTTCTCAGACCTTGAGAAGCAAGGTACAAAGGGACTTTGAGGAGCTCCCTTCCACAGCTTTTCGGCCGTTGCGTGACTCATTGAATACCTTACTGAAAAAGTTCCACAAAGGTCCTCCAAAAGTCAGAACACAGATTAGCATTGCAGTGGCTGCCTTGGCTGTGCACGTGCCTGCAGAAGACTGGGGGGATGGTGGTATAGTTAAATGGCTTAGGGATGAGATGGATTCCCATCCGGAATATATACCGGGATTCTTGGAGTTACTTACAGTTCTACCGGAGGAAGTATTAAATTATAAGATTGCAGCTCGCCCAGAAAGGCGACGTCAATTTGAAAAAGAGCTTACATCTCAAATGGAAATTGCTCTTAATATCTTGACAGCATGTTTGAGTATTTCTGAACTTAAGGAGCAGGTTCTTGAGGCATTTGCTTCATGGCTTCGGCTAAAGCATGGGATTCCTGGATCAGTTCTTAGTTCTCATCCGCTAGTTCTCACTGCGTTGTCAAGCTTGAATTCTGAGTTACTTTCAGAGGCATCTGTAAATGTGATTTCCGAGTTAATACACTACACAACAGCAGGAAACATTGATGGTGTTTCTGCAAATATGCCCTTAATTCAAGTCATTGTACCTCAAGTTATGAATCTTAAAGTCCAGCTTGGTGATTCTACGAAGGACGAGGAAGATGTGAAGGCAATTGCTAGGTTATTTGCAGACATGGGTGATTCATATGTGGAACTGATTGCAACTGGTTCAGATGAATCAATGTTAATAGTGCATGCATTGTTGGAAGTTGCTTCACATCCTGAATATGATATTGCTTCTATGACTTTTAACTTTTGGCATAGTCTCCAGTTAAACTTGACTAAAAGGGAGTCCTATATTTCATATGGCAACGAAGCATGCATTGAAGCTGAGAGAAATAGAAGGCTGCAGGTTTTTCGACCTGCATATGAGTCACTTGTATCGCTGGTTATCTTTCGGGTACAGTATCCTGAAGATTATCAAGACCTTTCATACGAGGATCTTAAGGAATTTAAGCAGACTAAATATGCTGTTGCGGATGTATTAACAGATGCATCATCAGTACTTGGCGGTGATGCCACACTTAAAATTCTATACATGAAACTGCTTGAGGCTGTATCTGGCCATGGTAATAATGAACACAAGGAATGGTGTCCAGCGGAGGCTGCTTTATTTTGTATTCGGGCTATATCAAATTATGTGTCGGTTGTTGAAGCAGAAGTAATGCCTCAGATCATGGCTTTGCTTCCGAAACTTCCTCATCAACCCCAATTACTTCAAACAGTGTGTTTAACTATTGGAGCTTATTCAAAATGGCTAGATTCTGCATCTTGTGGACTGTCTGTACTGCCCTCAGTTTTAGATATCCTAATGAATGGCATGGGTACATCTGAAGAATGTGCAGCTGCTGCTGCTTTGGCATTTAGACACATCTGTGATGACTGCCGGAAAAAGCTTTGTGGATGCTTAGAAGGTCTATTCCACATCTACAACAAGACCGTTAATGGAGAAGATAGTTTCAAAGTTCCTGCTGAAGACTCTTTGCATCTGGTTGAAGCTTTGAGTATGGTTGTTACTGAACTTCCTCCAGATGATGCTAAGAGAGCTCTTGAGGCATTATGCATACCAGTCATAACTCCTTTACAGGAAGCTATCAATCAAGGTCCAGAAAGCTTGAGTAAAAGACCTTCTCGTCAGTTAACAGTTCATATTGATCGATTTGCCTACATCTTTAGATTTGTAAATCATCCTCAAGTTGTGGCAGATGCTATTCAACGGCTATGGCCAATTTTTAAGGCTATTTTTGATATTCGTGCTTGGGACATGAGAACAATGGAATCTCTCTGCCGAGCATGTAAATATGCAGTGAGAACTTCTGGAAGGTTCATGGGGCTCACAATTGGTGCCATGCTGGAAGAGATTCAGAGTCTTTATAGGCAGCACCACCAACCATGCTTTCTTTATCTCTCCAGTGAAGTTATAAAGATATTTGGTTCTGATCCATCTTGTGCTGACTACCTGAAAAATTTGATTGAGGCGCTCTTCCAGCACACAACACGCCTTCTCACAAATATTCAGGAATTCACAGCCCGGCCTGATATAGCAGATGATTGTTTTTTGTTGGCCTCAAGGTGTATTCGCTACTGTCCTCAACTGTTTATTCCCTCGTCTGTTTTTCCTTCATTAGTTGATTGCTCTATGATTGGGATCACAGTACAGCATAGGGAGGCTTCCAATTCCATATTGCATTTCTTGGCTGACATTTTTGATCTTGCGAATTCCTCTGTGGGGGAGCAATTTATACCAATAAGAGATAGTGTAATTATTCCTCGAGGTGCCAGCATCACCAGAATTTTGGTTGCTTCATTAACGGGAGCACTTCCTAAATCTCGAGTGGATGTGGTATCTTATACACTCTTGGCATTAACTCGATCATATGGGATGCAAGCACTGGAATGGGCAAAAAAAAGTGTTTTGTTAATTCCATCAACAGCTGTTACAGATGTAGAGCGATCAAGATTCTTAAAAGCTCTTTCTGATGCAGCATCCAGAGGGGATACTAATGGACTTACTGTTCCTGTTGAAGAGCTGTCTGATGTTTGTCGACGTAACCGGGCAGTTCAGGAAATAGTTCAAGAAGCTTTGAGACCGCTTGAGTTGAATATGGTGAATGTATCATAG

>Glyma.17g094800.2 sequence-type=CDS polypeptide=Glyma.17g094800.2.p locus=Glyma.17g094800 ID=Glyma.17g094800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGACCTTCAGAACACTGTGAAGGAAGCCCTAAATGCACTGTACCATCACCCCGATGATGCGGTGCGCATGCAAGCCGATCGCTATCTCCAGGATTTCCAGCGAACTTTGGATGCGTGGCAGGTGGCTGATAATTTACTTCATGATCCCAGTAGCAATCTAGAAACTTTGATATTTTGTTCTCAGACCTTGAGAAGCAAGGTACAAAGGGACTTTGAGGAGCTCCCTTCCACAGCTTTTCGGCCGTTGCGTGACTCATTGAATACCTTACTGAAAAAGTTCCACAAAGGTCCTCCAAAAGTCAGAACACAGATTAGCATTGCAGTGGCTGCCTTGGCTGTGCACGTGCCTGCAGAAGACTGGGGGGATGGTGGTATAGTTAAATGGCTTAGGGATGAGATGGATTCCCATCCGGAATATATACCGGGATTCTTGGAGTTACTTACAGTTCTACCGGAGGAAGTATTAAATTATAAGATTGCAGCTCGCCCAGAAAGGCGACGTCAATTTGAAAAAGAGCTTACATCTCAAATGGAAATTGCTCTTAATATCTTGACAGCATGTTTGAGTATTTCTGAACTTAAGGAGCAGGTTCTTGAGGCATTTGCTTCATGGCTTCGGCTAAAGCATGGGATTCCTGGATCAGTTCTTAGTTCTCATCCGCTAGTTCTCACTGCGTTGTCAAGCTTGAATTCTGAGTTACTTTCAGAGGCATCTGTAAATGTGATTTCCGAGTTAATACACTACACAACAGCAGGAAACATTGATGGTGTTTCTGCAAATATGCCCTTAATTCAAGTCATTGTACCTCAAGTTATGAATCTTAAAGTCCAGCTTGGTGATTCTACGAAGGACGAGGAAGATGTGAAGGCAATTGCTAGGTTATTTGCAGACATGGGTGATTCATATGTGGAACTGATTGCAACTGGTTCAGATGAATCAATGTTAATAGTGCATGCATTGTTGGAAGTTGCTTCACATCCTGAATATGATATTGCTTCTATGACTTTTAACTTTTGGCATAGTCTCCAGTTAAACTTGACTAAAAGGGAGTCCTATATTTCATATGGCAACGAAGCATGCATTGAAGCTGAGAGAAATAGAAGGCTGCAGGTTTTTCGACCTGCATATGAGTCACTTGTATCGCTGGTTATCTTTCGGGTACAGTATCCTGAAGATTATCAAGACCTTTCATACGAGGATCTTAAGGAATTTAAGCAGACTAAATATGCTGTTGCGGATGTATTAACAGATGCATCATCAGTACTTGGCGGTGATGCCACACTTAAAATTCTATACATGAAACTGCTTGAGGCTGTATCTGGCCATGGTAATAATGAACACAAGGAATGGTGTCCAGCGGAGGCTGCTTTATTTTGTATTCGGGCTATATCAAATTATGTGTCGGTTGTTGAAGCAGAAGTAATGCCTCAGATCATGGCTTTGCTTCCGAAACTTCCTCATCAACCCCAATTACTTCAAACAGTGTGTTTAACTATTGGAGCTTATTCAAAATGGCTAGATTCTGCATCTTGTGGACTGTCTGTACTGCCCTCAGTTTTAGATATCCTAATGAATGGCATGGGTACATCTGAAGAATGTGCAGCTGCTGCTGCTTTGGCATTTAGACACATCTGTGATGACTGCCGGAAAAAGCTTTGTGGATGCTTAGAAGGTCTATTCCACATCTACAACAAGACCGTTAATGGAGAAGATAGTTTCAAAGTTCCTGCTGAAGACTCTTTGCATCTGGTTGAAGCTTTGAGTATGGTTGTTACTGAACTTCCTCCAGATGATGCTAAGAGAGCTCTTGAGGCATTATGCATACCAGTCATAACTCCTTTACAGGAAGCTATCAATCAAGGTCCAGAAAGCTTGAGTAAAAGACCTTCTCGTCAGTTAACAGTTCATATTGATCGATTTGCCTACATCTTTAGATTTGTAAATCATCCTCAAGTTGTGGCAGATGCTATTCAACGGCTATGGCCAATTTTTAAGGCTATTTTTGATATTCGTGCTTGGGACATGAGAACAATGGAATCTCTCTGCCGAGCATGTAAATATGCAGTGAGAACTTCTGGAAGGTTCATGGGGCTCACAATTGGTGCCATGCTGGAAGAGATTCAGAGTCTTTATAGGCAGCACCACCAACCATGCTTTCTTTATCTCTCCAGTGAAGTTATAAAGGGAAGACTTTGGATTTGGCCCTTATTGTCGGTGCTAATTAAGTGGTAG

Predicted protein sequences of Glyma.17g094800

Limit To All Plant Sequences

>Glyma.17g094800.1.p sequence-type=predicted peptide transcript=Glyma.17g094800.1 locus=Glyma.17g094800 ID=Glyma.17g094800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDLQNTVKEALNALYHHPDDAVRMQADRYLQDFQRTLDAWQVADNLLHDPSSNLETLIFCSQTLRSKVQRDFEELPSTAFRPLRDSLNTLLKKFHKGPPKVRTQISIAVAALAVHVPAEDWGDGGIVKWLRDEMDSHPEYIPGFLELLTVLPEEVLNYKIAARPERRRQFEKELTSQMEIALNILTACLSISELKEQVLEAFASWLRLKHGIPGSVLSSHPLVLTALSSLNSELLSEASVNVISELIHYTTAGNIDGVSANMPLIQVIVPQVMNLKVQLGDSTKDEEDVKAIARLFADMGDSYVELIATGSDESMLIVHALLEVASHPEYDIASMTFNFWHSLQLNLTKRESYISYGNEACIEAERNRRLQVFRPAYESLVSLVIFRVQYPEDYQDLSYEDLKEFKQTKYAVADVLTDASSVLGGDATLKILYMKLLEAVSGHGNNEHKEWCPAEAALFCIRAISNYVSVVEAEVMPQIMALLPKLPHQPQLLQTVCLTIGAYSKWLDSASCGLSVLPSVLDILMNGMGTSEECAAAAALAFRHICDDCRKKLCGCLEGLFHIYNKTVNGEDSFKVPAEDSLHLVEALSMVVTELPPDDAKRALEALCIPVITPLQEAINQGPESLSKRPSRQLTVHIDRFAYIFRFVNHPQVVADAIQRLWPIFKAIFDIRAWDMRTMESLCRACKYAVRTSGRFMGLTIGAMLEEIQSLYRQHHQPCFLYLSSEVIKIFGSDPSCADYLKNLIEALFQHTTRLLTNIQEFTARPDIADDCFLLASRCIRYCPQLFIPSSVFPSLVDCSMIGITVQHREASNSILHFLADIFDLANSSVGEQFIPIRDSVIIPRGASITRILVASLTGALPKSRVDVVSYTLLALTRSYGMQALEWAKKSVLLIPSTAVTDVERSRFLKALSDAASRGDTNGLTVPVEELSDVCRRNRAVQEIVQEALRPLELNMVNVS*

>Glyma.17g094800.2.p sequence-type=predicted peptide transcript=Glyma.17g094800.2 locus=Glyma.17g094800 ID=Glyma.17g094800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDLQNTVKEALNALYHHPDDAVRMQADRYLQDFQRTLDAWQVADNLLHDPSSNLETLIFCSQTLRSKVQRDFEELPSTAFRPLRDSLNTLLKKFHKGPPKVRTQISIAVAALAVHVPAEDWGDGGIVKWLRDEMDSHPEYIPGFLELLTVLPEEVLNYKIAARPERRRQFEKELTSQMEIALNILTACLSISELKEQVLEAFASWLRLKHGIPGSVLSSHPLVLTALSSLNSELLSEASVNVISELIHYTTAGNIDGVSANMPLIQVIVPQVMNLKVQLGDSTKDEEDVKAIARLFADMGDSYVELIATGSDESMLIVHALLEVASHPEYDIASMTFNFWHSLQLNLTKRESYISYGNEACIEAERNRRLQVFRPAYESLVSLVIFRVQYPEDYQDLSYEDLKEFKQTKYAVADVLTDASSVLGGDATLKILYMKLLEAVSGHGNNEHKEWCPAEAALFCIRAISNYVSVVEAEVMPQIMALLPKLPHQPQLLQTVCLTIGAYSKWLDSASCGLSVLPSVLDILMNGMGTSEECAAAAALAFRHICDDCRKKLCGCLEGLFHIYNKTVNGEDSFKVPAEDSLHLVEALSMVVTELPPDDAKRALEALCIPVITPLQEAINQGPESLSKRPSRQLTVHIDRFAYIFRFVNHPQVVADAIQRLWPIFKAIFDIRAWDMRTMESLCRACKYAVRTSGRFMGLTIGAMLEEIQSLYRQHHQPCFLYLSSEVIKGRLWIWPLLSVLIKW*

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