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Report for Sequence Feature Glyma.17g089000

Feature Type:gene_model
Chromosome:Gm17
Start:6905120
stop:6906523
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.17g089000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G16760.1AT Inositol 1,3,4-trisphosphate 5/6-kinase family protein JGI N/AIEA
GO:0010264GO-bp myo-inositol hexakisphosphate biosynthetic process EnsemblGenomesN/AIEA
GO:0016310GO-bp phosphorylation EnsemblGenomesN/AIEA
GO:0032957GO-bp inositol trisphosphate metabolic process EnsemblGenomesN/AIEA
GO:0032957GO-bp inositol trisphosphate metabolic process JGI N/AIEA
GO:0052746GO-bp inositol phosphorylation EnsemblGenomesN/AIEA
GO:0005622GO-cc intracellular EnsemblGenomesN/AIEA
GO:0005622GO-cc intracellular JGI N/AIEA
GO:0005829GO-cc cytosol EnsemblGenomesN/AIEA
GO:0000166GO-mf nucleotide binding EnsemblGenomesN/AIEA
GO:0000287GO-mf magnesium ion binding EnsemblGenomesN/AIEA
GO:0000287GO-mf magnesium ion binding JGI N/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
GO:0016301GO-mf kinase activity EnsemblGenomesN/AIEA
GO:0016740GO-mf transferase activity EnsemblGenomesN/AIEA
GO:0046872GO-mf metal ion binding EnsemblGenomesN/AIEA
GO:0047325GO-mf inositol tetrakisphosphate 1-kinase activity EnsemblGenomesN/AIEA
GO:0047325GO-mf inositol tetrakisphosphate 1-kinase activity JGI N/AIEA
GO:0052725GO-mf inositol-1,3,4-trisphosphate 6-kinase activity EnsemblGenomesN/AIEA
GO:0052725GO-mf inositol-1,3,4-trisphosphate 6-kinase activity JGI N/AIEA
GO:0052726GO-mf inositol-1,3,4-trisphosphate 5-kinase activity EnsemblGenomesN/AIEA
GO:0052726GO-mf inositol-1,3,4-trisphosphate 5-kinase activity JGI N/AIEA
PTHR14217Panther FAMILY NOT NAMED JGI N/AIEA
PF05770PFAM Inositol 1, 3, 4-trisphosphate 5/6-kinase JGI N/AIEA
PWY-4562SoyCyc9 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) Plant Metabolic Network ISS
PWY-4661SoyCyc9 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) Plant Metabolic Network ISS
PWY-4765SoyCyc9 superpathway of lipid-dependent phytate biosynthesis Plant Metabolic Network ISS
PWY-6554SoyCyc9 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) Plant Metabolic Network ISS
GN7V-41138SoyCyc9-rxn inositol-1,3,4-trisphosphate 5/6-kinase Plant Metabolic Network ISS

Proteins Associated with Glyma.17g089000
LocusGene SymbolProtein Name
ITPK2 inositol phosphate kinase

Expression Patterns of Glyma.17g089000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.17g089000 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma17g09680 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.17g089000
>Glyma.17g089000.1 sequence-type=CDS polypeptide=Glyma.17g089000.1.p locus=Glyma.17g089000 ID=Glyma.17g089000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCCGAGTCGGAAGTAGCAGGTCAGAGGTACCGTGTGGGCTATGCTCTCCAAGGCAAGAAAGTCGAAAGCTTCATTCAACCCTCACTCCTCGATCACGCCAAACAACACAGCATCGATCTCGTCCAAATCGACCCCACCGCACCCTTACAACAACAAGGTCCTTTCCACTGCATCATTCACAAACTCCACACCCAACACTGGAAAAACCTCCTCCAACAATTCTCATCCAAACACCCAAACACCGTAATCATCGACCCTCCCGAGCTGGTGGATCGCCTGCACAACCGGGTTTCAATGCTCGACGCAGTGACCCACTTACAATTTTCCCTCGAAAACGCCACCATTGGGGTTCCAAAGCAAGTGGTTGTGAACGAACCCAAATCCTTCGATTTGCACAAATTCGAAGAAGAACAGGGCTTGCGGTTCCCGGTGATTGCGAAACCGCTGGCGGCTGACGGCGGCGCCGGCTCTCACGAACTGTGTTTGGTTTTCGACGAGGAGGGACTCCACGCGTTGAGCGTTCCCATGGTGCTGCAAGAGTTCGTGAATCACGGCGGGGTCGTGTTCAAGATTTACGTTGCTGGGCAGCGCGTGAATTGCGTAAAGCGCAAGTCTTTGGGTGACATAACGGAAGAGAAGCTGAAAGTGTTAAGGGGGTCGCTGCCGTTTTCTCGTGTGTCGAGTTTGGGGGTTGAAGACGAGGGTGGCGGCGCCGTTGAGGACGCTGAAATGCCTCCGCAGAGTTTGGTGGGTGAGTTGGCGAGGGGATTGAGGGAGGCATTGGGACTTAACCTTTTTAACGTTGATGTCATTAGAGATGGTAAGGAACCGACAAGGTACCTCGTTATTGATATCAATTACTTTCCCGGGTATGCGAAATTGCCCTCTTATGAGCCTTTTATCACCGATTTTTTGTTGGACATTGTACGCTCCAAGACTGCGTAG
Predicted protein sequences of Glyma.17g089000
>Glyma.17g089000.1.p sequence-type=predicted peptide transcript=Glyma.17g089000.1 locus=Glyma.17g089000 ID=Glyma.17g089000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSESEVAGQRYRVGYALQGKKVESFIQPSLLDHAKQHSIDLVQIDPTAPLQQQGPFHCIIHKLHTQHWKNLLQQFSSKHPNTVIIDPPELVDRLHNRVSMLDAVTHLQFSLENATIGVPKQVVVNEPKSFDLHKFEEEQGLRFPVIAKPLAADGGAGSHELCLVFDEEGLHALSVPMVLQEFVNHGGVVFKIYVAGQRVNCVKRKSLGDITEEKLKVLRGSLPFSRVSSLGVEDEGGGAVEDAEMPPQSLVGELARGLREALGLNLFNVDVIRDGKEPTRYLVIDINYFPGYAKLPSYEPFITDFLLDIVRSKTA*






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