Glyma.17g065600

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Report for Sequence Feature Glyma.17g065600

Feature Type:	gene_model
Chromosome:	Gm17
Start:	5059138
stop:	5068637
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.17g065600

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G30310.2	AT	FGGY family of carbohydrate kinase	JGI	N/A	IEA
GO:0005975	GO-bp	carbohydrate metabolic process	EnsemblGenomes	N/A	IEA
GO:0005975	GO-bp	carbohydrate metabolic process	JGI	N/A	IEA
GO:0016773	GO-mf	phosphotransferase activity, alcohol group as acceptor	EnsemblGenomes	N/A	IEA
GO:0016773	GO-mf	phosphotransferase activity, alcohol group as acceptor	JGI	N/A	IEA
KOG2517	KOG	Ribulose kinase and related carbohydrate kinases	JGI	N/A	IEA
PTHR10196	Panther	SUGAR KINASE	JGI	N/A	IEA
PTHR10196:SF8	Panther		JGI	N/A	IEA
PF00370	PFAM	FGGY family of carbohydrate kinases, N-terminal domain	JGI	N/A	IEA
PF02782	PFAM	FGGY family of carbohydrate kinases, C-terminal domain	JGI	N/A	IEA
GN7V-54929	SoyCyc9-rxn	ribulokinase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.17g065600

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.17g065600 not represented in the dataset	Glyma.17g065600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.17g065600

Paralog	Evidence	Comments
Glyma.13g094600	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.17g065600 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma17g07310	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.17g065600

Limit To All Plant Sequences

>Glyma.17g065600.2 sequence-type=transcript locus=Glyma.17g065600 ID=Glyma.17g065600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTAAACTCTTAAAGTACAATTTACCACTATGAAATTCGCGACCTTACACAGAGATGAAAATATTCATAATTAAAACTTAAACCAGTGATGATCGACGAATGCTGACAATCGATATTTGATTTTGATAGGGAAAACAAATCAAAACAAAGATATTAAATAAATAGAGACAAAGAAGAAGCGATTGATAATGTCCGGCACAAGAAGGGTTTCGTCCGATACACACTCTCTCTCCGTCGAAATGGCCGCTTCTTCTTCCTCTCCCGACGAGCCTTCTCGCTCCGTCTTCCTCGGCGTCGACGTCGGCACCGGCAGCGCTCGTGCAGGTCTATTTGACGAGGAAGGAAAGCTTCTTGGTTCATCTAGCAGCTCAATACAAATATGGAAAGACGGTGCCTGTGTTGAGCAATCCTCTACAGATATATGGCTTGCAGTTTGTGCAGCTGTAAAAGCAGCTTGCTCTAAAGCTGAAGTTGCACCAACAGAAGTAAAGGGTATGGGATTTGCTGCTACTTGTTCTCTTGTTGCTGTGGATTCCGACAGCTCACCTGTTTCAGTTTCTTGGAGTGGTGATTCAAGAAGAAATGTGATTGTATGGATGGATCATAGAGCTGTAGAACAAGCCGAAAGGATCAATTCCTCTAAATCACCTGTATTGGAGTACTGTGGTGGAGCTGTTTCACCTGAAATGGAGCCACCAAAGCTTCTATGGGTTAAAGAAAATTTGCAAGAATCTTGGTCAATGGTTTTCAGGTGGATGGACTTAAGCGATTGGTTGTCATACAGGGCAACCGGTGATGATACTCGCAGTCTATGCACCACAGTTTGTAAATGGACATATCTGGGTCATGCACACATGCAGCATGTCAATGATAAAGAGTCTCGAGACATGGAAGCTTGTGGATGGGATGATGATTTTTGGGAGGAAATTGGTTTGGGTGATCTTATTGAAGGACATCATGCGAAGATAGGACGAAGTGTTGCTTTCCCTGGCCATCCTTTGGGTTCTGGCCTTACTCCTACTGCAGCAAAGGAACTGGGTCTGGTACCAGGAATTCCTGTTGGGACATCATTAATTGATGCTCATGCTGGTGGCGTGGGGGTAATTGAAAGTGTGCCACCATCAGAAGCTGAAGAACATGACATGGAAGCAATTTGCAACCGTATGGTGTTAGTTTGTGGAACTTCTACATGCCATATGGCTGTATCGCGGAGCAAATTGTTCATACCTGGGGTTTGGGGTCCATTTTGGTCAGCAATGGTACCAGAATATTGGCTAACGGAAGGTGGGCAGAGTGCTACTGGTGCATTATTGGATCATATAATTGAAAACCATGCTGCTTCTGCACGCCTTGCAAATCAAGCTGCTACCCAAAAGATTTCATTGTTTGAGCTTCTGAACAAGATGTTGGAAACAATGATAGTTGAGCTGAACCTATCCTTTATTGCTGCCTTGACTGAAGATGTACATGTTCTTCCTGACTTCCATGGGAATAGGTCACCCATTGCAGATCCAAAAGCAAAAGGAGTCATCTATGGTTTGACACTTGACACAAGTGACAAACAGTTGGCTCTTCTTTACCTGGCTACTGTGCAGGGCATTGCATATGGCACACGTCACATTGTAGAGCATTGCAATGCTCATGGTCACAAAATAAACACACTACTTGCATGTGGCGGCCTTTCAAAGAATCCTATCTTCATGCAGGAACATGCTGATATTATTGGTATGTGTTGAGGAGTGGGGTGGGTTGCCCTATAATTCTTCCAAGGGAAAGTGAATCTGTGCTCTTGGGTGCTGCTATTCTGGGTGCCGTTGCTACAAGAAAATATCATAGCCTTAGCGAGGCCATGAAAGCCCTGAATGCAGCTGGCCAGGTCATTCATCCATCTAAGGATCCAAAGGTAAAAAAGTACCATGATGCCAAATACAAGATCTTCCGTGGCCTTTATGAACAGCAGTTCTCATATCGTTCTACGATGGCCCAAGCCTTGTCATAGCTTTGCAGAATGTTTTGACTCAAACTGTCAATTGCAGTTAGGTGCTCCTTGCGAAGATTGTATATTCATGCTTCAAGAATTAAAGTCATTGGGATGGAGAAAGAAATTATGGCCTGAATACGAATACTGCCATTTTGACGAAGATCGGTTTTCAATTTGGGTGGCAGGTTAGACATTGAACATCAGAGATACAAGGAAAAATAATCACCAATACTATGGTTAAAATTCTTATAGAAATTTTATGTACAGGCTCACTGGCATCTTATTTTCTCCCTTGAACGCCTTGCGCACACTTATCAAAATAAAATAAAAAAAATAGGCAGCTGCTACTGCTAGTATACATACTGTACAAATATAGCGAGTTTGATACTTGGATAACATCATTGTTCTAAGTTGTACCATATGACTTCCTTCGATTTATTTGGAATTCTTGGAACCCTCCGTCGTAGCCCCATAATTCTTAGTCAGATATGATTTTGGGCTTGAATATTACGAAATCAATGAATTAAATTTATA

Coding sequences of Glyma.17g065600

Limit To All Plant Sequences

>Glyma.17g065600.1 sequence-type=CDS polypeptide=Glyma.17g065600.1.p locus=Glyma.17g065600 ID=Glyma.17g065600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCCGGCACAAGAAGGGTTTCGTCCGATACACACTCTCTCTCCGTCGAAATGGCCGCTTCTTCTTCCTCTCCCGACGAGCCTTCTCGCTCCGTCTTCCTCGGCGTCGACGTCGGCACCGGCAGCGCTCGTGCAGGTCTATTTGACGAGGAAGGAAAGCTTCTTGGTTCATCTAGCAGCTCAATACAAATATGGAAAGACGGTGCCTGTGTTGAGCAATCCTCTACAGATATATGGCTTGCAGTTTGTGCAGCTGTAAAAGCAGCTTGCTCTAAAGCTGAAGTTGCACCAACAGAAGTAAAGGGTATGGGATTTGCTGCTACTTGTTCTCTTGTTGCTGTGGATTCCGACAGCTCACCTGTTTCAGTTTCTTGGAGTGGTGATTCAAGAAGAAATGTGATTGTATGGATGGATCATAGAGCTGTAGAACAAGCCGAAAGGATCAATTCCTCTAAATCACCTGTATTGGAGTACTGTGGTGGAGCTGTTTCACCTGAAATGGAGCCACCAAAGCTTCTATGGGTTAAAGAAAATTTGCAAGAATCTTGGTCAATGGTTTTCAGGTGGATGGACTTAAGCGATTGGTTGTCATACAGGGCAACCGGTGATGATACTCGCAGTCTATGCACCACAGTTTGTAAATGGACATATCTGGGTCATGCACACATGCAGCATGTCAATGATAAAGAGTCTCGAGACATGGAAGCTTGTGGATGGGATGATGATTTTTGGGAGGAAATTGGTTTGGGTGATCTTATTGAAGGACATCATGCGAAGATAGGACGAAGTGTTGCTTTCCCTGGCCATCCTTTGGGTTCTGGCCTTACTCCTACTGCAGCAAAGGAACTGGGTCTGGTACCAGGAATTCCTGTTGGGACATCATTAATTGATGCTCATGCTGGTGGCGTGGGGGTAATTGAAAGTGTGCCACCATCAGAAGCTGAAGAACATGACATGGAAGCAATTTGCAACCGTATGGTGTTAGTTTGTGGAACTTCTACATGCCATATGGCTGTATCGCGGAGCAAATTGTTCATACCTGGGGTTTGGGGTCCATTTTGGTCAGCAATGGTACCAGAATATTGGCTAACGGAAGGTGGGCAGAGTGCTACTGGTGCATTATTGGATCATATAATTGAAAACCATGCTGCTTCTGCACGCCTTGCAAATCAAGCTGCTACCCAAAAGATTTCATTGTTTGAGCTTCTGAACAAGATGTTGGAAACAATGATAGTTGAGCTGAACCTATCCTTTATTGCTGCCTTGACTGAAGATGTACATGTTCTTCCTGACTTCCATGGGAATAGGTCACCCATTGCAGATCCAAAAGCAAAAGGAGTCATCTATGGTTTGACACTTGACACAAGTGACAAACAGTTGGCTCTTCTTTACCTGGCTACTGTGCAGGGCATTGCATATGGCACACGTCACATTGTAGAGCATTGCAATGCTCATGGTCACAAAATAAACACACTACTTGCATGTGGCGGCCTTTCAAAGAATCCTATCTTCATGCAGGAACATGCTGATATTATTGGTTGCCCTATAATTCTTCCAAGGGAAAGTGAATCTGTGCTCTTGGGTGCTGCTATTCTGGGTGCCGTTGCTACAAGAAAATATCATAGCCTTAGCGAGGCCATGAAAGCCCTGAATGCAGCTGGCCAGGTCATTCATCCATCTAAGGATCCAAAGGTAAAAAAGTACCATGATGCCAAATACAAGATCTTCCGTGGCCTTTATGAACAGCAGTTCTCATATCGTTCTACGATGGCCCAAGCCTTGTCATAG

>Glyma.17g065600.2 sequence-type=CDS polypeptide=Glyma.17g065600.2.p locus=Glyma.17g065600 ID=Glyma.17g065600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCCGGCACAAGAAGGGTTTCGTCCGATACACACTCTCTCTCCGTCGAAATGGCCGCTTCTTCTTCCTCTCCCGACGAGCCTTCTCGCTCCGTCTTCCTCGGCGTCGACGTCGGCACCGGCAGCGCTCGTGCAGGTCTATTTGACGAGGAAGGAAAGCTTCTTGGTTCATCTAGCAGCTCAATACAAATATGGAAAGACGGTGCCTGTGTTGAGCAATCCTCTACAGATATATGGCTTGCAGTTTGTGCAGCTGTAAAAGCAGCTTGCTCTAAAGCTGAAGTTGCACCAACAGAAGTAAAGGGTATGGGATTTGCTGCTACTTGTTCTCTTGTTGCTGTGGATTCCGACAGCTCACCTGTTTCAGTTTCTTGGAGTGGTGATTCAAGAAGAAATGTGATTGTATGGATGGATCATAGAGCTGTAGAACAAGCCGAAAGGATCAATTCCTCTAAATCACCTGTATTGGAGTACTGTGGTGGAGCTGTTTCACCTGAAATGGAGCCACCAAAGCTTCTATGGGTTAAAGAAAATTTGCAAGAATCTTGGTCAATGGTTTTCAGGTGGATGGACTTAAGCGATTGGTTGTCATACAGGGCAACCGGTGATGATACTCGCAGTCTATGCACCACAGTTTGTAAATGGACATATCTGGGTCATGCACACATGCAGCATGTCAATGATAAAGAGTCTCGAGACATGGAAGCTTGTGGATGGGATGATGATTTTTGGGAGGAAATTGGTTTGGGTGATCTTATTGAAGGACATCATGCGAAGATAGGACGAAGTGTTGCTTTCCCTGGCCATCCTTTGGGTTCTGGCCTTACTCCTACTGCAGCAAAGGAACTGGGTCTGGTACCAGGAATTCCTGTTGGGACATCATTAATTGATGCTCATGCTGGTGGCGTGGGGGTAATTGAAAGTGTGCCACCATCAGAAGCTGAAGAACATGACATGGAAGCAATTTGCAACCGTATGGTGTTAGTTTGTGGAACTTCTACATGCCATATGGCTGTATCGCGGAGCAAATTGTTCATACCTGGGGTTTGGGGTCCATTTTGGTCAGCAATGGTACCAGAATATTGGCTAACGGAAGGTGGGCAGAGTGCTACTGGTGCATTATTGGATCATATAATTGAAAACCATGCTGCTTCTGCACGCCTTGCAAATCAAGCTGCTACCCAAAAGATTTCATTGTTTGAGCTTCTGAACAAGATGTTGGAAACAATGATAGTTGAGCTGAACCTATCCTTTATTGCTGCCTTGACTGAAGATGTACATGTTCTTCCTGACTTCCATGGGAATAGGTCACCCATTGCAGATCCAAAAGCAAAAGGAGTCATCTATGGTTTGACACTTGACACAAGTGACAAACAGTTGGCTCTTCTTTACCTGGCTACTGTGCAGGGCATTGCATATGGCACACGTCACATTGTAGAGCATTGCAATGCTCATGGTCACAAAATAAACACACTACTTGCATGTGGCGGCCTTTCAAAGAATCCTATCTTCATGCAGGAACATGCTGATATTATTGGTATGTGTTGA

Predicted protein sequences of Glyma.17g065600

Limit To All Plant Sequences

>Glyma.17g065600.1.p sequence-type=predicted peptide transcript=Glyma.17g065600.1 locus=Glyma.17g065600 ID=Glyma.17g065600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSGTRRVSSDTHSLSVEMAASSSSPDEPSRSVFLGVDVGTGSARAGLFDEEGKLLGSSSSSIQIWKDGACVEQSSTDIWLAVCAAVKAACSKAEVAPTEVKGMGFAATCSLVAVDSDSSPVSVSWSGDSRRNVIVWMDHRAVEQAERINSSKSPVLEYCGGAVSPEMEPPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQHVNDKESRDMEACGWDDDFWEEIGLGDLIEGHHAKIGRSVAFPGHPLGSGLTPTAAKELGLVPGIPVGTSLIDAHAGGVGVIESVPPSEAEEHDMEAICNRMVLVCGTSTCHMAVSRSKLFIPGVWGPFWSAMVPEYWLTEGGQSATGALLDHIIENHAASARLANQAATQKISLFELLNKMLETMIVELNLSFIAALTEDVHVLPDFHGNRSPIADPKAKGVIYGLTLDTSDKQLALLYLATVQGIAYGTRHIVEHCNAHGHKINTLLACGGLSKNPIFMQEHADIIGCPIILPRESESVLLGAAILGAVATRKYHSLSEAMKALNAAGQVIHPSKDPKVKKYHDAKYKIFRGLYEQQFSYRSTMAQALS*

>Glyma.17g065600.2.p sequence-type=predicted peptide transcript=Glyma.17g065600.2 locus=Glyma.17g065600 ID=Glyma.17g065600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSGTRRVSSDTHSLSVEMAASSSSPDEPSRSVFLGVDVGTGSARAGLFDEEGKLLGSSSSSIQIWKDGACVEQSSTDIWLAVCAAVKAACSKAEVAPTEVKGMGFAATCSLVAVDSDSSPVSVSWSGDSRRNVIVWMDHRAVEQAERINSSKSPVLEYCGGAVSPEMEPPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQHVNDKESRDMEACGWDDDFWEEIGLGDLIEGHHAKIGRSVAFPGHPLGSGLTPTAAKELGLVPGIPVGTSLIDAHAGGVGVIESVPPSEAEEHDMEAICNRMVLVCGTSTCHMAVSRSKLFIPGVWGPFWSAMVPEYWLTEGGQSATGALLDHIIENHAASARLANQAATQKISLFELLNKMLETMIVELNLSFIAALTEDVHVLPDFHGNRSPIADPKAKGVIYGLTLDTSDKQLALLYLATVQGIAYGTRHIVEHCNAHGHKINTLLACGGLSKNPIFMQEHADIIGMC*

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