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A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G21240.1 | AT | 4-coumarate:CoA ligase 2 | JGI | N/A | IEA |
GO:0008152 | GO-bp | metabolic process | EnsemblGenomes | N/A | IEA |
GO:0008152 | GO-bp | metabolic process | JGI | N/A | IEA |
GO:0003824 | GO-mf | catalytic activity | EnsemblGenomes | N/A | IEA |
GO:0003824 | GO-mf | catalytic activity | JGI | N/A | IEA |
KOG1176 | KOG | Acyl-CoA synthetase | JGI | N/A | IEA |
PTHR24096 | Panther | FAMILY NOT NAMED | JGI | N/A | IEA |
PTHR24096:SF43 | Panther | JGI | N/A | IEA | |
PF00501 | PFAM | AMP-binding enzyme | JGI | N/A | IEA |
PWY-1121 | SoyCyc9 | suberin monomers biosynthesis | Plant Metabolic Network | ISS | |
PWY-361 | SoyCyc9 | phenylpropanoid biosynthesis | Plant Metabolic Network | ISS | |
PWY-5754 | SoyCyc9 | 4-hydroxybenzoate biosynthesis I (eukaryotes) | Plant Metabolic Network | ISS | |
PWY-6320 | SoyCyc9 | phaselate biosynthesis | Plant Metabolic Network | ISS | |
PWY-6982 | SoyCyc9 | umbelliferone biosynthesis | Plant Metabolic Network | ISS | |
PWY1F-FLAVSYN | SoyCyc9 | flavonoid biosynthesis | Plant Metabolic Network | ISS | |
GN7V-64294 | SoyCyc9-rxn | 4-coumarate-CoA ligase | Plant Metabolic Network | ISS |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma17g07180 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.17g064500.1 sequence-type=CDS polypeptide=Glyma.17g064500.1.p locus=Glyma.17g064500 ID=Glyma.17g064500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGAAGAGCAACAAGCTCACCACGACTTCATTTTCCATTCCAAACTCCCCGACATTTACATCCCATCGCACCTCCCTCTCCACACCTACATTTTCCAAAACCTTTCCCAATTCAAACACCGTCCCTGCCTCATCAACGGGACCACCGGCGAGACCTTCTCCTACCACGCCATCCAACTCACCGCCCGCAGAGTCGCCTCCGGTCTCAACAAACTCGGCATCCAAAAAGGCGACGTCATCCTCCTCCTCCTCCAGAACTGCCCCCAATTCGTCCTCGCATTCCTCGGCGCCTCCTACCGCGGTGCCACTGTCACCACCGCCAATCCCTTCTACACTCCGGCGGAGGTAGCGAAACAAGCCACAGCGTCCAACTCCAAACTCATCATAACGCAAGCATCTTACGTGGATAAAGTCAAGGATTTCGCGAGAGAAAACGACGTCAAAGTGATATGCGTTGACTCGGCGCCGGAAGGATACCTTCCCTTCTCGGAGTTAACGGAGGCCGACGAGGGAGACATTCCCGCCGTTAAAATATCTCAAGATGACGTGGTTGCGCTGCCGTACTCGTCTGGCACGACGGGGCTTCCGAAGGGAGTGATGCTAACGCACAAGGGACTCGTTACGAGCGTGGCTCAACAGGTTGACGGAGAGAACCCTAATTTGTATTTTCGGAGCAGCGATGTGGTTTTGTGCTTGCTTCCACTTTTCCACATTTATGCTCTCAACTCTGTTTTGCTGTGTTCCCTTCGAGTAGGGGCTTCCGTTTTGATCGTGCCGAAATTTGAGATCATTACGTTGCTGGAGTTGATCCAGAAACACAAGGTGAGCATCGCGCCGTTTGTGCCGCCCATCGTATTGACCGTTGCAAAGAGTCCCGATTTGGAGCGATACGACTTGTCGTCGATTCGAATGATTATGTCGGGTGCGGCACCTATGGGCAAAGAACTTGAGGATTCTCTCAGGGCCAAACTTCCCAACGCCATACTCGGACAGGGTTACGGGATGACAGAGGCAGGGCCAGTGCTATCAATGTGCTTAGCGTTTGCGAAGGAGCCAATGCAGGTGAAATCAGGTGCCTGCGGGACTGTCGTAAGAAATGCGGAGATGAAGATCGTTGACCCTCGAACTGGTGCTTCGCTTCATAGAAATCAAGCTGGTGAGATTTGCATCAGAGGCAACCAGATCATGAAAGGTTACCTAAATGATCAAGAGGCCACACAAAGAACTATAGACAAGGAAGGATGGTTGCATACCGGCGATATTGGATACATTGACGATGATGATGAGCTTTTCGTAGTTGATCGGTTAAAGGATCTTATCAAATACAAAGGATTTCAAGTGGCTCCAGCTGAGCTCGAAGCCATTTTAATTGCTCACCCAAGCATTTCTGATGCTGCTGTTGTGTCCATGAAGGATGAAGTTGCGGGAGAGGTTCCTATTGCATTTCTTGTACGATCAAATGGTTCTAAGGTCACCGAGGATGAAATCATGCGATACATCTCAAAGCAGGTTGTGTTTTACAAAAGAATCAGTAGGGTTTTCTTTGTGGGCTCAATTCCAAAGGCCCCCTCTGGAAAGATCTTGCGGAAAGACCTTAGGGCAAGGTATTGA
>Glyma.17g064500.1.p sequence-type=predicted peptide transcript=Glyma.17g064500.1 locus=Glyma.17g064500 ID=Glyma.17g064500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MEEQQAHHDFIFHSKLPDIYIPSHLPLHTYIFQNLSQFKHRPCLINGTTGETFSYHAIQLTARRVASGLNKLGIQKGDVILLLLQNCPQFVLAFLGASYRGATVTTANPFYTPAEVAKQATASNSKLIITQASYVDKVKDFARENDVKVICVDSAPEGYLPFSELTEADEGDIPAVKISQDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFRSSDVVLCLLPLFHIYALNSVLLCSLRVGASVLIVPKFEIITLLELIQKHKVSIAPFVPPIVLTVAKSPDLERYDLSSIRMIMSGAAPMGKELEDSLRAKLPNAILGQGYGMTEAGPVLSMCLAFAKEPMQVKSGACGTVVRNAEMKIVDPRTGASLHRNQAGEICIRGNQIMKGYLNDQEATQRTIDKEGWLHTGDIGYIDDDDELFVVDRLKDLIKYKGFQVAPAELEAILIAHPSISDAAVVSMKDEVAGEVPIAFLVRSNGSKVTEDEIMRYISKQVVFYKRISRVFFVGSIPKAPSGKILRKDLRARY*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||