SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research



Report for Sequence Feature Glyma.17g054900

Feature Type:gene_model
Chromosome:Gm17
Start:4175234
stop:4177594
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G29735.1AT JGI N/AIEA
KOG4452 KOG Predicted membrane protein JGI N/AIEA
PTHR13636PantherFam UNCHARACTERIZED JGI N/AIEA
PF05251Pfam Oligosaccharyltransferase subunit 5 JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma17g06260 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.17g054900.1 sequence-type=CDS polypeptide=Glyma.17g054900.1.p locus=Glyma.17g054900 id=Glyma.17g054900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTGAAGGCACCAAAACCGATAACGAGTCCCGTCCCCGATTCGTGGTACCCCACACTCTCCGTCTTCACTCTCGCCATCGGCCTCGTCTTAACCGCCTCTTTCTTCATTTATGAAGCAACATCTTCTAGGAAAAGTCGTTCACTTGTTCAGGAGCTGACAACTGGAGCAGTGGCTTCAGTCTTCTTGGGTTTTGGGTCCCTGTTCCTCCTACTTGCTTCTGGCGTTTATGTCTAA

>Glyma.17g054900.2 sequence-type=CDS polypeptide=Glyma.17g054900.2.p locus=Glyma.17g054900 id=Glyma.17g054900.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCACCAAAACCGATAACGAGTCCCGTCCCCGATTCGTGGTACCCCACACTCTCCGTCTTCACTCTCGCCATCGGCCTCGTCTTAACCGCCTCTTTCTTCATTTATGAAGCAACATCTTCTAGGAAAAGTCGTTCACTTGTTCAGGAGCTGACAACTGGAGCAGTGGCTTCAGTCTTCTTGGGTTTTGGGTCCCTGTTCCTCCTACTTGCTTCTGGCGTTTATGTCTAA

>Glyma.17g054900.1.p sequence-type=predicted peptide transcript=Glyma.17g054900.1 locus=Glyma.17g054900 id=Glyma.17g054900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLKAPKPITSPVPDSWYPTLSVFTLAIGLVLTASFFIYEATSSRKSRSLVQELTTGAVASVFLGFGSLFLLLASGVYV*

>Glyma.17g054900.2.p sequence-type=predicted peptide transcript=Glyma.17g054900.2 locus=Glyma.17g054900 id=Glyma.17g054900.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAPKPITSPVPDSWYPTLSVFTLAIGLVLTASFFIYEATSSRKSRSLVQELTTGAVASVFLGFGSLFLLLASGVYV*







Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo