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Report for Sequence Feature Glyma.17g053300

Feature Type:gene_model
Chromosome:Gm17
Start:4054508
stop:4062724
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.17g053300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G19450.1AT membrane bound O-acyl transferase (MBOAT) family protein JGI N/AIEA
GO:0006071GO-bp glycerol metabolic process EnsemblGenomesN/AIEA
GO:0006629GO-bp lipid metabolic process EnsemblGenomesN/AIEA
GO:0019432GO-bp triglyceride biosynthetic process EnsemblGenomesN/AIEA
GO:0005783GO-cc endoplasmic reticulum EnsemblGenomesN/AIEA
GO:0005789GO-cc endoplasmic reticulum membrane EnsemblGenomesN/AIEA
GO:0009941GO-cc chloroplast envelope EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0004144GO-mf diacylglycerol O-acyltransferase activity EnsemblGenomesN/AIEA
GO:0008374GO-mf O-acyltransferase activity EnsemblGenomesN/AIEA
GO:0016740GO-mf transferase activity EnsemblGenomesN/AIEA
GO:0016746GO-mf transferase activity, transferring acyl groups EnsemblGenomesN/AIEA
KOG0380 KOG Sterol O-acyltransferase/Diacylglycerol O-acyltransferase JGI N/AIEA
PTHR10408Panther STEROL O-ACYLTRANSFERASE JGI N/AIEA
PF03062PFAM MBOAT, membrane-bound O-acyltransferase family JGI N/AIEA
TRIGLSYN-PWYSoyCyc9 diacylglycerol and triacylglycerol biosynthesis Plant Metabolic Network ISS
GN7V-43057SoyCyc9-rxn diacylglycerol O-acyltransferase Plant Metabolic Network ISS

Proteins Associated with Glyma.17g053300
LocusGene SymbolProtein Name
DGAT1b diacylglycerolacyltransferase-1b
DGAT diglyceride acetyltransferase

Expression Patterns of Glyma.17g053300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.17g053300
ParalogEvidenceComments
Glyma.13g106100 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.17g053300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma17g06120 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.17g053300
>Glyma.17g053300.2 sequence-type=transcript locus=Glyma.17g053300 ID=Glyma.17g053300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGAGAAGAGAAGACTGAGTTAGAAAACACGCTCGGTCTTCTTCTCCAATGGCGATTTCCGATGAGCCTGAAAGTGTAGCCACTGCTCTCAACCACTCTTCCCTGCGCCGCCGTCCCTCCGCCACCTCCACCGCCGGCCTCTTCAATTCGCCTGAGACAACCACCGACAGTTCCGGTGATGACTTGGCCAAGGATTCTGGTTCCGACGACTCCATCAACAGCGACGACGCCGCCGTCAATTCCCAACAGCAAAACGAAAAACAAGACACTGATTTCTCCGTCCTCAAATTCGCCTACCGTCCTTCCGTCCCCGCTCACCGCAAAGTGAAGGAAAGTCCGCTCAGCTCCGACACTATTTTCCGTCAGAGTCACGCGGGCCTCTTCAACCTTTGTATAGTAGTCCTTGTTGCTGTGAATAGCCGACTCATCATTGAGAATTTAATGAAGTATGGTTGGTTGATCAAATCTGGCTTTTGGTTTAGTTCAAAGTCATTGAGAGACTGGCCCCTTTTCATGTGTTGTCTTTCTCTTGTGGTATTTCCTTTCGCTGCCTTTATAGTGGAGAAGTTGGCACAACGGAAGTGTATACCCGAACCAGTTGTTGTTGTACTTCATATAATCATTACCTCAACTTCGCTTTTCTATCCAGTTTTAGTTATTCTCAGGTGTGATTCTGCTTTTGTATCAGGTGTCACGTTAATGCTGTTTTCTTGTGTTGTATGGTTAAAATTGGTGTCTTATGCACATACAAACTATGATATGAGAGCACTTACCAAATTAGTTGAAAAGGGAGAAGCACTGCTCGATACTCTGAACATGGACTATCCTTACAACGTAAGCTTCAAGAGCTTGGCATATTTCCTGGTTGCCCCTACATTATGTTACCAGCCAAGCTATCCTCGCACACCTTATATTCGAAAGGGTTGGTTGTTTCGCCAACTTGTCAAGCTGATAATATTTACAGGAGTTATGGGATTTATAATAGAACAATATATTAATCCCATAGTACAAAATTCACAGCATCCTCTCAAGGGAAACCTTCTTTACGCCACCGAGAGAGTTCTGAAGCTTTCTGTTCCAAATTTATATGTGTGGCTCTGCATGTTCTATTGCTTTTTCCACCTTTGATGATGATGATGTTATAAGTTTGTAATTGATTAATCTTTCAAATCATCGTTGAAATGATATCCACCTTCCTAAACACCTTAAATAGTAATTACATCATCA
Coding sequences of Glyma.17g053300
>Glyma.17g053300.1 sequence-type=CDS polypeptide=Glyma.17g053300.1.p locus=Glyma.17g053300 ID=Glyma.17g053300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGATTTCCGATGAGCCTGAAAGTGTAGCCACTGCTCTCAACCACTCTTCCCTGCGCCGCCGTCCCTCCGCCACCTCCACCGCCGGCCTCTTCAATTCGCCTGAGACAACCACCGACAGTTCCGGTGATGACTTGGCCAAGGATTCTGGTTCCGACGACTCCATCAACAGCGACGACGCCGCCGTCAATTCCCAACAGCAAAACGAAAAACAAGACACTGATTTCTCCGTCCTCAAATTCGCCTACCGTCCTTCCGTCCCCGCTCACCGCAAAGTGAAGGAAAGTCCGCTCAGCTCCGACACTATTTTCCGTCAGAGTCACGCGGGCCTCTTCAACCTTTGTATAGTAGTCCTTGTTGCTGTGAATAGCCGACTCATCATTGAGAATTTAATGAAGTATGGTTGGTTGATCAAATCTGGCTTTTGGTTTAGTTCAAAGTCATTGAGAGACTGGCCCCTTTTCATGTGTTGTCTTTCTCTTGTGGTATTTCCTTTCGCTGCCTTTATAGTGGAGAAGTTGGCACAACGGAAGTGTATACCCGAACCAGTTGTTGTTGTACTTCATATAATCATTACCTCAACTTCGCTTTTCTATCCAGTTTTAGTTATTCTCAGGTGTGATTCTGCTTTTGTATCAGGTGTCACGTTAATGCTGTTTTCTTGTGTTGTATGGTTAAAATTGGTGTCTTATGCACATACAAACTATGATATGAGAGCACTTACCAAATTAGTTGAAAAGGGAGAAGCACTGCTCGATACTCTGAACATGGACTATCCTTACAACGTAAGCTTCAAGAGCTTGGCATATTTCCTGGTTGCCCCTACATTATGTTACCAGCCAAGCTATCCTCGCACACCTTATATTCGAAAGGGTTGGTTGTTTCGCCAACTTGTCAAGCTGATAATATTTACAGGAGTTATGGGATTTATAATAGAACAATATATTAATCCCATAGTACAAAATTCACAGCATCCTCTCAAGGGAAACCTTCTTTACGCCACCGAGAGAGTTCTGAAGCTTTCTGTTCCAAATTTATATGTGTGGCTCTGCATGTTCTATTGCTTTTTCCACCTTTGGTTAAATATCCTGGCAGAGCTTCTTCGATTTGGTGATCGTGAATTCTACAAGGATTGGTGGAATGCCAAAACTGTCGAAGATTATTGGAGGATGTGGAATATGCCTGTTCACAAATGGATGATCCGCCACCTATATTTTCCATGTTTAAGGCACGGTCTACCAAAGGCTGCTGCTCTTTTAATTGCCTTCCTGGTTTCTGCTTTATTCCATGAGCTGTGCATTGCTGTTCCTTGCCACATATTCAAGTTGTGGGCTTTCGGTGGAATTATGTTTCAGGTTCCTTTGGTCTTGATCACTAATTATCTGCAAAATAAATTCAGAAACTCAATGGTTGGAAATATGATTTTTTGGTTCATATTCAGTATCCTTGGTCAACCTATGTGTGTACTGCTATACTACCATGACTTGATGAATAGGAAAGGCAAACTTGACTGA

>Glyma.17g053300.2 sequence-type=CDS polypeptide=Glyma.17g053300.2.p locus=Glyma.17g053300 ID=Glyma.17g053300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGATTTCCGATGAGCCTGAAAGTGTAGCCACTGCTCTCAACCACTCTTCCCTGCGCCGCCGTCCCTCCGCCACCTCCACCGCCGGCCTCTTCAATTCGCCTGAGACAACCACCGACAGTTCCGGTGATGACTTGGCCAAGGATTCTGGTTCCGACGACTCCATCAACAGCGACGACGCCGCCGTCAATTCCCAACAGCAAAACGAAAAACAAGACACTGATTTCTCCGTCCTCAAATTCGCCTACCGTCCTTCCGTCCCCGCTCACCGCAAAGTGAAGGAAAGTCCGCTCAGCTCCGACACTATTTTCCGTCAGAGTCACGCGGGCCTCTTCAACCTTTGTATAGTAGTCCTTGTTGCTGTGAATAGCCGACTCATCATTGAGAATTTAATGAAGTATGGTTGGTTGATCAAATCTGGCTTTTGGTTTAGTTCAAAGTCATTGAGAGACTGGCCCCTTTTCATGTGTTGTCTTTCTCTTGTGGTATTTCCTTTCGCTGCCTTTATAGTGGAGAAGTTGGCACAACGGAAGTGTATACCCGAACCAGTTGTTGTTGTACTTCATATAATCATTACCTCAACTTCGCTTTTCTATCCAGTTTTAGTTATTCTCAGGTGTGATTCTGCTTTTGTATCAGGTGTCACGTTAATGCTGTTTTCTTGTGTTGTATGGTTAAAATTGGTGTCTTATGCACATACAAACTATGATATGAGAGCACTTACCAAATTAGTTGAAAAGGGAGAAGCACTGCTCGATACTCTGAACATGGACTATCCTTACAACGTAAGCTTCAAGAGCTTGGCATATTTCCTGGTTGCCCCTACATTATGTTACCAGCCAAGCTATCCTCGCACACCTTATATTCGAAAGGGTTGGTTGTTTCGCCAACTTGTCAAGCTGATAATATTTACAGGAGTTATGGGATTTATAATAGAACAATATATTAATCCCATAGTACAAAATTCACAGCATCCTCTCAAGGGAAACCTTCTTTACGCCACCGAGAGAGTTCTGAAGCTTTCTGTTCCAAATTTATATGTGTGGCTCTGCATGTTCTATTGCTTTTTCCACCTTTGA
Predicted protein sequences of Glyma.17g053300
>Glyma.17g053300.1.p sequence-type=predicted peptide transcript=Glyma.17g053300.1 locus=Glyma.17g053300 ID=Glyma.17g053300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAISDEPESVATALNHSSLRRRPSATSTAGLFNSPETTTDSSGDDLAKDSGSDDSINSDDAAVNSQQQNEKQDTDFSVLKFAYRPSVPAHRKVKESPLSSDTIFRQSHAGLFNLCIVVLVAVNSRLIIENLMKYGWLIKSGFWFSSKSLRDWPLFMCCLSLVVFPFAAFIVEKLAQRKCIPEPVVVVLHIIITSTSLFYPVLVILRCDSAFVSGVTLMLFSCVVWLKLVSYAHTNYDMRALTKLVEKGEALLDTLNMDYPYNVSFKSLAYFLVAPTLCYQPSYPRTPYIRKGWLFRQLVKLIIFTGVMGFIIEQYINPIVQNSQHPLKGNLLYATERVLKLSVPNLYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNAKTVEDYWRMWNMPVHKWMIRHLYFPCLRHGLPKAAALLIAFLVSALFHELCIAVPCHIFKLWAFGGIMFQVPLVLITNYLQNKFRNSMVGNMIFWFIFSILGQPMCVLLYYHDLMNRKGKLD*

>Glyma.17g053300.2.p sequence-type=predicted peptide transcript=Glyma.17g053300.2 locus=Glyma.17g053300 ID=Glyma.17g053300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAISDEPESVATALNHSSLRRRPSATSTAGLFNSPETTTDSSGDDLAKDSGSDDSINSDDAAVNSQQQNEKQDTDFSVLKFAYRPSVPAHRKVKESPLSSDTIFRQSHAGLFNLCIVVLVAVNSRLIIENLMKYGWLIKSGFWFSSKSLRDWPLFMCCLSLVVFPFAAFIVEKLAQRKCIPEPVVVVLHIIITSTSLFYPVLVILRCDSAFVSGVTLMLFSCVVWLKLVSYAHTNYDMRALTKLVEKGEALLDTLNMDYPYNVSFKSLAYFLVAPTLCYQPSYPRTPYIRKGWLFRQLVKLIIFTGVMGFIIEQYINPIVQNSQHPLKGNLLYATERVLKLSVPNLYVWLCMFYCFFHL*






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