Glyma.17g052400

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Report for Sequence Feature Glyma.17g052400

Feature Type:	gene_model
Chromosome:	Gm17
Start:	3973300
stop:	3979131
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.17g052400

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G29810.1	AT	MAP kinase kinase 2	JGI	N/A	IEA
GO:0006468	GO-bp	protein phosphorylation	EnsemblGenomes	N/A	IEA
GO:0006468	GO-bp	protein phosphorylation	JGI	N/A	IEA
GO:0007346	GO-bp	regulation of mitotic cell cycle	EnsemblGenomes	N/A	IEA
GO:0016310	GO-bp	phosphorylation	EnsemblGenomes	N/A	IEA
GO:0023014	GO-bp	signal transduction by protein phosphorylation	EnsemblGenomes	N/A	IEA
GO:0031098	GO-bp	stress-activated protein kinase signaling cascade	EnsemblGenomes	N/A	IEA
GO:0032147	GO-bp	activation of protein kinase activity	EnsemblGenomes	N/A	IEA
GO:0005737	GO-cc	cytoplasm	EnsemblGenomes	N/A	IEA
GO:0000166	GO-mf	nucleotide binding	EnsemblGenomes	N/A	IEA
GO:0004672	GO-mf	protein kinase activity	EnsemblGenomes	N/A	IEA
GO:0004672	GO-mf	protein kinase activity	JGI	N/A	IEA
GO:0004674	GO-mf	protein serine/threonine kinase activity	EnsemblGenomes	N/A	IEA
GO:0005524	GO-mf	ATP binding	EnsemblGenomes	N/A	IEA
GO:0005524	GO-mf	ATP binding	JGI	N/A	IEA
GO:0016301	GO-mf	kinase activity	EnsemblGenomes	N/A	IEA
KOG0581	KOG	Mitogen-activated protein kinase kinase (MAP2K)	JGI	N/A	IEA
PTHR24360	Panther	MAPKK/MEKK	JGI	N/A	IEA
PTHR24360:SF39	Panther		JGI	N/A	IEA
PF00069	PFAM	Protein kinase domain	JGI	N/A	IEA

Proteins Associated with Glyma.17g052400

Locus	Gene Symbol	Protein Name
	MAPKK2	mitogen-activated protein kinase kinase MAPKK2

Expression Patterns of Glyma.17g052400

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.17g052400

Paralog	Evidence	Comments
Glyma.13g106900	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.17g052400 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma17g06020	Wm82.a1.v1.1	IGC	As supplied by JGI

Coding sequences of Glyma.17g052400

Limit To All Plant Sequences

>Glyma.17g052400.1 sequence-type=CDS polypeptide=Glyma.17g052400.1.p locus=Glyma.17g052400 ID=Glyma.17g052400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGAAAGGAAACTTGGGTCTTGGTCTCAAACTCTCAGTTCCTGTGTCTGATCAATCTAATTTTGCCAAGTTCCTGACTGAAAGTGGGACTTTTAAGGATGGGGATCTGCTTGTCAACAGGGATGGAGTTCGAATTGTCTCTCAGAATGATGTCGAAGCTCCACCTCCAATCAAGCCTACAGACAACCAGTTAGCTTTAGCAGACATAGATGTAATCAAAGTTGTTGGAAAGGGAAATGGAGGGGTAGTCCAATTGGTACAACACAAATGGACTAGTCAGTTTTTTGCGTTGAAGGTAATTCAGATGAATATTGAGGAGTCTATGCGCAAGCAGATTACACAAGAGCTGAAAATTAATCAACAAGCACAATGCCCTTATGTTGTTGTCTGTTACCAATCATTCTATGAAAACGGTGTCATATCAATCATCTTAGAGTACATGGATGGAGGTTCCTTAGCTGATCTGCTGAAGAAAGTTAAAACAATTCCAGAGTCTTATCTTGCTGCCATCTGTAAGCAGGTGCTGAAGGGTCTAGTTTATCTCCACCACGAAAGGCATATTATCCACAGAGACTTAAAACCTTCTAATTTGTTAATAAATCATATTGGTGAAGTAAAGATCACTGACTTTGGTGTGAGTGCAATTATGGAAAGTACATCTGGTCAAGCAAATACTTTCATTGGAACCTGCAACTATATGTCTCCAGAGAGAATCAATGGAAGCCAGGAAGGCTACAACTTCAAAAGTGATATATGGAGTTTGGGACTAATATTACTTGAGTGTGCTTTGGGTCGGTTTCCATATGCACCGCCTGATCAAAGCGAAACATGGGAAAGCATTTATGAGCTTATTGAAGCCATTGTTGAGAAACCTCCTCCTAGTCCTCCATCTGAACAATTTTCTACAGAATTTTGCTCATTTATCTCTGCATGTCTTCAGAAAGACCCAAAGGATCGGCTGTCAGCTCAGGAATTAATGGCACATCCTTTTGTCAACATGTATGATGACTTGGAAGTGGATCTTTCAGCTTACTTCTCGAATGCAGGATCTCCTCTTGCAACCTTATAA

Predicted protein sequences of Glyma.17g052400

Limit To All Plant Sequences

>Glyma.17g052400.1.p sequence-type=predicted peptide transcript=Glyma.17g052400.1 locus=Glyma.17g052400 ID=Glyma.17g052400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKKGNLGLGLKLSVPVSDQSNFAKFLTESGTFKDGDLLVNRDGVRIVSQNDVEAPPPIKPTDNQLALADIDVIKVVGKGNGGVVQLVQHKWTSQFFALKVIQMNIEESMRKQITQELKINQQAQCPYVVVCYQSFYENGVISIILEYMDGGSLADLLKKVKTIPESYLAAICKQVLKGLVYLHHERHIIHRDLKPSNLLINHIGEVKITDFGVSAIMESTSGQANTFIGTCNYMSPERINGSQEGYNFKSDIWSLGLILLECALGRFPYAPPDQSETWESIYELIEAIVEKPPPSPPSEQFSTEFCSFISACLQKDPKDRLSAQELMAHPFVNMYDDLEVDLSAYFSNAGSPLATL*

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