SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.17g030700

Feature Type:gene_model
Chromosome:Gm17
Start:2254471
stop:2257599
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.17g030700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G16120.1AT ATSEB1,COBL7,SEB1 JGI N/AIEA
GO:0010215GO-bp cellulose microfibril organization JGI N/AIEA
GO:0016049GO-bp cell growth JGI N/AIEA
GO:0031225GO-cc anchored component of membrane JGI N/AIEA
PTHR31052PantherFam COBRA-LIKE PROTEIN 7 JGI N/AIEA
PTHR31052:SF3PantherFam COBRA-LIKE PROTEIN 7 JGI N/AIEA
PF04833Pfam COBRA-like protein JGI N/AIEA

Proteins Associated with Glyma.17g030700
LocusGene SymbolProtein Name
COBL18 Regulates cell wall expansion and cellulose depostion

Gene model name correspondences to Glyma.17g030700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma17g03390 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.17g030700
>Glyma.17g030700.1 sequence-type=CDS polypeptide=Glyma.17g030700.1.p locus=Glyma.17g030700 id=Glyma.17g030700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTCCTCCGAAGCCACTGTTGCTACCTCGGCATAATCGCCGGGCTAGCAGTGTTCCTCGCAACGACGTCGTTCGCCGACGCGCAATCCTGCAACGGCATCCTCGTCTCATACGCCTACACCGGCGGCCTGCGGTTGCCGCCCAACGTCTCCGACTCGGCTAAGCAGCCGTACCGGTTCGAGTCGACGGTGACGGTTCTCAACAACGGCCTCGACGAGCTCAAGTCGTGGAAGGTCTTCGTTGGGTTCGACCACGACGAGTTGTTGGTCTCCGCCTCCAATGCTGTGCTCGCCGACGGCACCACCCTCCCCGCCGCCGTCGGAAACGGCACCGTCTTCGCCGGTTTCCCCATGACTGATCTCAAGACCGCCGTCGAAACCGCCGGCGACTTGACCCAGATGCAGGCTCAGATCGAACTCGTCGGCACCGTGTTCGGGGTGGCGCCGCCCAGTGTTCCGATGCCGAAATCCATCAACCTCGCCAATGATGGTTTCCTCTGTCGCAAATCCACCGCTCAAGGGAAGAATGCGAGTAGTGTGTGTTGCACGAGAGATCCCAAGTTCAAAACTAACATTACTACGGATGAAGAGTTTCTGCCACGTCAGAGTGGTGATCTTACCATTATGTATGATGTGATCAGAACTTATGATTCAAATTACTGGGCTGAGGTTACCGTTGCAAACCATAACCCACTTGGGAGGCTTGATAACTGGAGGTTGAGCTGGGACTGGATGAATGATGAGTTTATATATTCAATGAAAGGGGCTTATCCTTCGGTTGTGGATGCTTCTGATTGTCTCTTTGGTAAGCAAGGAACTTTCTATAGGGATCTTGACTTTGCCCTTGTGTTGAATTGTGAGAGAAGGCCAACCATAATTGATCTCCCTCCCACCAAGTTCAATGATTCCGACCTTGGGAAGATTCCCTTTTGTTGCCGGAATGGTACTATTTTGCCTCCGTCCATGGATCCTAGCATGTCTGCTTCGAGATTCCAAATGCAGGTCTTCAAGATGCCGCCGGCGCTTAACCGATCCCAGCTTTCGCCACCGCAGAACTGGAAGATAAGTGGCACACTCAACCCTGACTATGAATGTGGCCCTCCAGTAAGAGTGAGTCCTACCGAAAATCCTGACCCGTCCGGCTTACCTTCAAACAAAACTGTGATGGCCAGTTGGCAGGTTGTGTGCAACATAACAACAGCCAAGAGAACATCAAGTAAATGCTGTGTCTCGTTTTCATCTTATTACAATGATTCAGTTATTCCATGCAAAACATGTGCTTGTGGATGCCCCAAGAACACAGAGAGAACATGTAGTACTAGTGCTCCAGCTATGTGGCTTCCACCAGAGGCACTTCTTGTTCCCTTTGTGAACCGAACTGCCAAGGCTGTTGCTTGGGCAAGTCTGAAACATCTCCGGGTGCCAAACCCATTGCCGTGTAGCGATAACTGTGGTGTGAGCATCAATTGGCATTTGTACACAGACTACACTAAAGGATGGAGTGCAAGGGTGACACTTTTTAACTGGGGTGACACTAATTTTGCAGACTGGTTTGCCGCAGTACAAATGGACAAAGCAGCTTCGGGTTTTGAGAAAATGTATTCATTCAATGCAACTCTTCTAGATGGTGTAAACAATACAATAATCATGCAAGGTTTGCCAGGATTGAACTACCTTGTAGCAGAAGCAGATGGAGCTGACCCTTTGAGAGATCCTAGGGTGCCTGGTAAACAACAATCAGTTATCTCATTTACAAAGAAAACTACTCCTGGAATCAACGTAGCTCGTGGAGATGGGTTTCCCACTAAGGTATTTTTCAATGGCGAAGAATGTTCTCTTCCTTCAGTGTATCCAAGCAGTAGTGGTTTCAGGAATGGTTTTTCATTGGCTACTTCCTTGCTTCTAACACTGTTGATGATCCTCTTGATGCGGTAA

>Glyma.17g030700.2 sequence-type=CDS polypeptide=Glyma.17g030700.2.p locus=Glyma.17g030700 id=Glyma.17g030700.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTATGATGTGATCAGAACTTATGATTCAAATTACTGGGCTGAGGTTACCGTTGCAAACCATAACCCACTTGGGAGGCTTGATAACTGGAGGTTGAGCTGGGACTGGATGAATGATGAGTTTATATATTCAATGAAAGGGGCTTATCCTTCGGTTGTGGATGCTTCTGATTGTCTCTTTGGTAAGCAAGGAACTTTCTATAGGGATCTTGACTTTGCCCTTGTGTTGAATTGTGAGAGAAGGCCAACCATAATTGATCTCCCTCCCACCAAGTTCAATGATTCCGACCTTGGGAAGATTCCCTTTTGTTGCCGGAATGGTACTATTTTGCCTCCGTCCATGGATCCTAGCATGTCTGCTTCGAGATTCCAAATGCAGGTCTTCAAGATGCCGCCGGCGCTTAACCGATCCCAGCTTTCGCCACCGCAGAACTGGAAGATAAGTGGCACACTCAACCCTGACTATGAATGTGGCCCTCCAGTAAGAGTGAGTCCTACCGAAAATCCTGACCCGTCCGGCTTACCTTCAAACAAAACTGTGATGGCCAGTTGGCAGGTTGTGTGCAACATAACAACAGCCAAGAGAACATCAAGTAAATGCTGTGTCTCGTTTTCATCTTATTACAATGATTCAGTTATTCCATGCAAAACATGTGCTTGTGGATGCCCCAAGAACACAGAGAGAACATGTAGTACTAGTGCTCCAGCTATGTGGCTTCCACCAGAGGCACTTCTTGTTCCCTTTGTGAACCGAACTGCCAAGGCTGTTGCTTGGGCAAGTCTGAAACATCTCCGGGTGCCAAACCCATTGCCGTGTAGCGATAACTGTGGTGTGAGCATCAATTGGCATTTGTACACAGACTACACTAAAGGATGGAGTGCAAGGGTGACACTTTTTAACTGGGGTGACACTAATTTTGCAGACTGGTTTGCCGCAGTACAAATGGACAAAGCAGCTTCGGGTTTTGAGAAAATGTATTCATTCAATGCAACTCTTCTAGATGGTGTAAACAATACAATAATCATGCAAGGTTTGCCAGGATTGAACTACCTTGTAGCAGAAGCAGATGGAGCTGACCCTTTGAGAGATCCTAGGGTGCCTGGTAAACAACAATCAGTTATCTCATTTACAAAGAAAACTACTCCTGGAATCAACGTAGCTCGTGGAGATGGGTTTCCCACTAAGGTATTTTTCAATGGCGAAGAATGTTCTCTTCCTTCAGTGTATCCAAGCAGTAGTGGTTTCAGGAATGGTTTTTCATTGGCTACTTCCTTGCTTCTAACACTGTTGATGATCCTCTTGATGCGGTAA
Predicted protein sequences of Glyma.17g030700
>Glyma.17g030700.1.p sequence-type=predicted peptide transcript=Glyma.17g030700.1 locus=Glyma.17g030700 id=Glyma.17g030700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLLRSHCCYLGIIAGLAVFLATTSFADAQSCNGILVSYAYTGGLRLPPNVSDSAKQPYRFESTVTVLNNGLDELKSWKVFVGFDHDELLVSASNAVLADGTTLPAAVGNGTVFAGFPMTDLKTAVETAGDLTQMQAQIELVGTVFGVAPPSVPMPKSINLANDGFLCRKSTAQGKNASSVCCTRDPKFKTNITTDEEFLPRQSGDLTIMYDVIRTYDSNYWAEVTVANHNPLGRLDNWRLSWDWMNDEFIYSMKGAYPSVVDASDCLFGKQGTFYRDLDFALVLNCERRPTIIDLPPTKFNDSDLGKIPFCCRNGTILPPSMDPSMSASRFQMQVFKMPPALNRSQLSPPQNWKISGTLNPDYECGPPVRVSPTENPDPSGLPSNKTVMASWQVVCNITTAKRTSSKCCVSFSSYYNDSVIPCKTCACGCPKNTERTCSTSAPAMWLPPEALLVPFVNRTAKAVAWASLKHLRVPNPLPCSDNCGVSINWHLYTDYTKGWSARVTLFNWGDTNFADWFAAVQMDKAASGFEKMYSFNATLLDGVNNTIIMQGLPGLNYLVAEADGADPLRDPRVPGKQQSVISFTKKTTPGINVARGDGFPTKVFFNGEECSLPSVYPSSSGFRNGFSLATSLLLTLLMILLMR*

>Glyma.17g030700.2.p sequence-type=predicted peptide transcript=Glyma.17g030700.2 locus=Glyma.17g030700 id=Glyma.17g030700.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MYDVIRTYDSNYWAEVTVANHNPLGRLDNWRLSWDWMNDEFIYSMKGAYPSVVDASDCLFGKQGTFYRDLDFALVLNCERRPTIIDLPPTKFNDSDLGKIPFCCRNGTILPPSMDPSMSASRFQMQVFKMPPALNRSQLSPPQNWKISGTLNPDYECGPPVRVSPTENPDPSGLPSNKTVMASWQVVCNITTAKRTSSKCCVSFSSYYNDSVIPCKTCACGCPKNTERTCSTSAPAMWLPPEALLVPFVNRTAKAVAWASLKHLRVPNPLPCSDNCGVSINWHLYTDYTKGWSARVTLFNWGDTNFADWFAAVQMDKAASGFEKMYSFNATLLDGVNNTIIMQGLPGLNYLVAEADGADPLRDPRVPGKQQSVISFTKKTTPGINVARGDGFPTKVFFNGEECSLPSVYPSSSGFRNGFSLATSLLLTLLMILLMR*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo