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Report for Sequence Feature Glyma.17g027400

Feature Type:gene_model
Chromosome:Gm17
Start:2025277
stop:2026167
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.17g027400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G15910.1AT drought-induced 21 JGI N/AIEA
GO:0006950GO-bp response to stress EnsemblGenomesN/AIEA
GO:0006950GO-bp response to stress JGI N/AIEA
PF03242PFAM Late embryogenesis abundant protein JGI N/AIEA

Proteins Associated with Glyma.17g027400
LocusGene SymbolProtein Name
LEA5 desiccation protective protein LEA5

Expression Patterns of Glyma.17g027400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.17g027400 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma17g03040 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.17g027400
>Glyma.17g027400.1 sequence-type=CDS polypeptide=Glyma.17g027400.1.p locus=Glyma.17g027400 ID=Glyma.17g027400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCCGTTCTCTCTCGCAAGCCAAACGTATTGGTGTCCTTGTTGCTCAATCTATCTCCCTAATTCCCGTTCATCGGCGAGGTTACGCAGTGGCATCCGATGTATCGGTAAGAGTTGGATTGGGTAATATTGGGCGAAGGAATGGAATCGTGGGAGGTGTAGAAGAGAAGCCTGATACAAGAGATGGTTCAAAAGCCTACTCAACTGATTGGGCCCCAGACCCAGTAACAGGTTACTATAGGCCCATTAACCACACCCCTGAAATTGACCCGGTGGAGCTTCGGCATAGGTTGCTCCGATCACCTCCACTAGAGCCTAGAGGAGTTGCTGGACACCCATGA
Predicted protein sequences of Glyma.17g027400
>Glyma.17g027400.1.p sequence-type=predicted peptide transcript=Glyma.17g027400.1 locus=Glyma.17g027400 ID=Glyma.17g027400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MARSLSQAKRIGVLVAQSISLIPVHRRGYAVASDVSVRVGLGNIGRRNGIVGGVEEKPDTRDGSKAYSTDWAPDPVTGYYRPINHTPEIDPVELRHRLLRSPPLEPRGVAGHP*






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