Glyma.17g009400

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Report for Sequence Feature Glyma.17g009400

Feature Type:	gene_model
Chromosome:	Gm17
Start:	761553
stop:	763867
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.17g009400

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G05530.1	AT	indole-3-butyric acid response 1	JGI	N/A	IEA
GO:0008152	GO-bp	metabolic process	JGI	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	EnsemblGenomes	N/A	IEA
GO:0016491	GO-mf	oxidoreductase activity	EnsemblGenomes	N/A	IEA
GO:0016491	GO-mf	oxidoreductase activity	JGI	N/A	IEA
KOG0725	KOG	Reductases with broad range of substrate specificities	JGI	N/A	IEA
PTHR24322	Panther	FAMILY NOT NAMED	JGI	N/A	IEA
PTHR24322:SF67	Panther		JGI	N/A	IEA
PF00106	PFAM	short chain dehydrogenase	JGI	N/A	IEA
GN7V-68211	SoyCyc9-rxn	Enzyme name not determined	Plant Metabolic Network		ISS

Expression Patterns of Glyma.17g009400

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.17g009400 not represented in the dataset	Glyma.17g009400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.17g009400 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma17g01300	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.17g009400

Limit To All Plant Sequences

>Glyma.17g009400.2 sequence-type=transcript locus=Glyma.17g009400 ID=Glyma.17g009400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATAAGAATTGGGGAAATAAATAAATAGTAAGAAGTAGATGAGCGTGATTTGGTAGGCGAGTCTCGTAGCCATCGTGATTGCAACATCGAAATGGAAACGCCGAAGAGATTTGAAGGTAAGGTAGCCATCGTGACTGCTTCCACACAGGGAATCGGCTTAGCAATAGCCGAGAGGCTTGGCCTCGAGGGTGCATCTGTCGTCATCTCTTCTCGCAAACAGCAAAATGTTGATGCGGCCGCGGAACAACTGAGGGCCAAAGGAATTCAAGTGTTGGGGGTTGTTTGCCATGTTTCAAGTGCTCAGCAAAGGAAGAATTTGATCGACAAAACTGTCCAGAAGTATGGAAAGATAGATGTTGTTGTGTCCAATGCTGCTGCAAATCCTTCTGTTGATGCCATCTTGCAAACAAAAGACTCGGTCCTTGACAAGCTATGGGAGATAAATGTCAAAGCCCTGGCTGCTGAGATGGCCCCAAACACTCGTGTAAACTGTGTTGCTCCTGGTTTTGTGCCAACCAATTTTGCTTCATTCATTACAAGTAACGATGCTGTGAAGAAAGAACTGGAAGAGAAGACATTACTTGGAAGGCTTGGTACAACAGAAGACATGGGTGCTGCAGCAGCTTTTTTGGCATCTGACGATGCTGCTTATATAACAGGAGAGACCATTGTAGTTGCTGGGGGAACGCCTTCCAGGTTGTAGATTCCACTATCAATCTTCTCTGTTGTGGGCCAGCCCCACACATTCCTGAAGCTCTTGTTCGTCTGAAATTATTACATGATTGAGGATTATGTGTTACTGGCATGAGATTACTAGGCTATGTTTGCCATTACTAATGAAATAATAAAAGTTATCACTTTTTAAGAGGGGGAAAACACACAAAGATATGCACAATAAGAGAGTAATAGGGAATTACATGGTGGAAAAAGAAAAAGTATCAAACACGTGCATTTATCCGAAAGTGCCCTCCCTAGCTCCAGGTAAGTGGAAAGTGGCAACTCACGGGTATTTGTCTACTACTACTTGAAATGCCGAGGGAACTTTTGAAGAGAAATCTTCATTGCTGTCTGCAAGAGCAATGCGTTGTACTAATTTGGTTTCAGTAACTCTTTTATTTTTCCAAGATTTAGACTCTGTTTGATTTGGTGTTGAATTACGTTCAACGACAAAAATTTCTCCC

Coding sequences of Glyma.17g009400

Limit To All Plant Sequences

>Glyma.17g009400.1 sequence-type=CDS polypeptide=Glyma.17g009400.1.p locus=Glyma.17g009400 ID=Glyma.17g009400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAACGCCGAAGAGATTTGAAGGTAAGGTAGCCATCGTGACTGCTTCCACACAGGGAATCGGCTTAGCAATAGCCGAGAGGCTTGGCCTCGAGGGTGCATCTGTCGTCATCTCTTCTCGCAAACAGCAAAATGTTGATGCGGCCGCGGAACAACTGAGGGCCAAAGGAATTCAAGTGTTGGGGGTTGTTTGCCATGTTTCAAGTGCTCAGCAAAGGAAGAATTTGATCGACAAAACTGTCCAGAAGTATGGAAAGATAGATGTTGTTGTGTCCAATGCTGCTGCAAATCCTTCTGTTGATGCCATCTTGCAAACAAAAGACTCGGTCCTTGACAAGCTATGGGAGATAAATGTCAAAGCCACTATACTTCTTCTGAAGGACGCAGTGCCTCACTTGCAGAAGGGTTCTTCTGTTGTTATCATTTCCTCAATTGCAGGTTTTAACCCGCCACCTTCTCTGGCTATGTATGGAGTGACCAAAACAGCCCTTCTTGGACTTACTAAAGCCCTGGCTGCTGAGATGGCCCCAAACACTCGTGTAAACTGTGTTGCTCCTGGTTTTGTGCCAACCAATTTTGCTTCATTCATTACAAGTAACGATGCTGTGAAGAAAGAACTGGAAGAGAAGACATTACTTGGAAGGCTTGGTACAACAGAAGACATGGGTGCTGCAGCAGCTTTTTTGGCATCTGACGATGCTGCTTATATAACAGGAGAGACCATTGTAGTTGCTGGGGGAACGCCTTCCAGGTTGTAG

>Glyma.17g009400.2 sequence-type=CDS polypeptide=Glyma.17g009400.2.p locus=Glyma.17g009400 ID=Glyma.17g009400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAACGCCGAAGAGATTTGAAGGTAAGGTAGCCATCGTGACTGCTTCCACACAGGGAATCGGCTTAGCAATAGCCGAGAGGCTTGGCCTCGAGGGTGCATCTGTCGTCATCTCTTCTCGCAAACAGCAAAATGTTGATGCGGCCGCGGAACAACTGAGGGCCAAAGGAATTCAAGTGTTGGGGGTTGTTTGCCATGTTTCAAGTGCTCAGCAAAGGAAGAATTTGATCGACAAAACTGTCCAGAAGTATGGAAAGATAGATGTTGTTGTGTCCAATGCTGCTGCAAATCCTTCTGTTGATGCCATCTTGCAAACAAAAGACTCGGTCCTTGACAAGCTATGGGAGATAAATGTCAAAGCCCTGGCTGCTGAGATGGCCCCAAACACTCGTGTAAACTGTGTTGCTCCTGGTTTTGTGCCAACCAATTTTGCTTCATTCATTACAAGTAACGATGCTGTGAAGAAAGAACTGGAAGAGAAGACATTACTTGGAAGGCTTGGTACAACAGAAGACATGGGTGCTGCAGCAGCTTTTTTGGCATCTGACGATGCTGCTTATATAACAGGAGAGACCATTGTAGTTGCTGGGGGAACGCCTTCCAGGTTGTAG

Predicted protein sequences of Glyma.17g009400

Limit To All Plant Sequences

>Glyma.17g009400.1.p sequence-type=predicted peptide transcript=Glyma.17g009400.1 locus=Glyma.17g009400 ID=Glyma.17g009400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
METPKRFEGKVAIVTASTQGIGLAIAERLGLEGASVVISSRKQQNVDAAAEQLRAKGIQVLGVVCHVSSAQQRKNLIDKTVQKYGKIDVVVSNAAANPSVDAILQTKDSVLDKLWEINVKATILLLKDAVPHLQKGSSVVIISSIAGFNPPPSLAMYGVTKTALLGLTKALAAEMAPNTRVNCVAPGFVPTNFASFITSNDAVKKELEEKTLLGRLGTTEDMGAAAAFLASDDAAYITGETIVVAGGTPSRL*

>Glyma.17g009400.2.p sequence-type=predicted peptide transcript=Glyma.17g009400.2 locus=Glyma.17g009400 ID=Glyma.17g009400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
METPKRFEGKVAIVTASTQGIGLAIAERLGLEGASVVISSRKQQNVDAAAEQLRAKGIQVLGVVCHVSSAQQRKNLIDKTVQKYGKIDVVVSNAAANPSVDAILQTKDSVLDKLWEINVKALAAEMAPNTRVNCVAPGFVPTNFASFITSNDAVKKELEEKTLLGRLGTTEDMGAAAAFLASDDAAYITGETIVVAGGTPSRL*

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