SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.17g002400

Feature Type:gene_model
Chromosome:Gm17
Start:274374
stop:279237
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.17g002400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G02500.1AT ATMEPCT,ISPD,MCT JGI N/AIEA
2.7.7.60EC 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JGI N/AIEA
K00991KEGG Terpenoid backbone biosynthesis JGI N/AIEA
PTHR32125PantherFam 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE, CHLOROPLASTIC JGI N/AIEA
PTHR32125:SF4PantherFam 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE, CHLOROPLASTIC JGI N/AIEA
PF12804Pfam MobA-like NTP transferase domain JGI N/AIEA

Gene model name correspondences to Glyma.17g002400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma17g00611 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.17g002400
>Glyma.17g002400.1 sequence-type=CDS polypeptide=Glyma.17g002400.1.p locus=Glyma.17g002400 id=Glyma.17g002400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTAGCTATTGGCTTTGGAGCCCCTCCTTCTCCACTTCCGTTTCATCTTCGCCTGGCTTCCTCTCCTTCTCCTTTGGCCTTCCCAATAATCCACAAATTCCAAAACGCAGGCAAGTCAGTGATAACAATCTGTTCAAAGAAAAATGCAAAATCAAGGGTGGTCACTCTCTGCTCTGCACCTGTGCAAGAGGTTAGTGATATTACTTTGAGAGAGAGAAGTGTTTCGGTTGTCCTATTGGCTGGAGGGCAGGGCAAGAGGATGGGAGCTAGCATGCCAAAGCAGTATCTTCCTCTTTTTGGTCAACCCATTGCTTTGTATAGTTTCCACACTTTTTTTCACCTGGTTCAAGTCAAAGAAATTATTGTGGTTTGTGATCCTTCATACAAGGACATTTTTGAAGATGCAAAGGGAGATTACCAAGCAGAACTCAAATTTGCACTGCCTGGAAAAGAAAGACAGGATTCTGTTTATAATGGCTTTCAGGCTGTTGATCCTAACTCTGAACTTGTTTGCATTCATGATTCTGCAAGACCTTTGGTATTATCAGCAGATGTGAAAAAGGTCCTTAAAGATGGTTTATTGAATGGAGCTGCAGTTCTTGGTGTCCCTGTGAAGGCCACAATCAAAGAGGCAAACAGGGAGTCGTTTGTTGTTAAAACACTGGACAGAAAAACGCTATGGGAGATGCAGACCCCACAGGTTATCAAGCCTGAGTTGTTGAGGAAAGGCTTTGAGCTTGTAAATAGGGAAGGTCTTGAAGTTACTGATGATGTGTCCATTGTTGAACACCTAAAACATCCTGTTTATATCACTCAAGGATCTTATACCAACATTAAGGTGACTACACCTGATGACATGTTACTGGCAGAGAGAATATTGAATATAAATGATGAAGACAATATAGTCTTGCCAGTTCACCTTTGA
Predicted protein sequences of Glyma.17g002400
>Glyma.17g002400.1.p sequence-type=predicted peptide transcript=Glyma.17g002400.1 locus=Glyma.17g002400 id=Glyma.17g002400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVAIGFGAPPSPLPFHLRLASSPSPLAFPIIHKFQNAGKSVITICSKKNAKSRVVTLCSAPVQEVSDITLRERSVSVVLLAGGQGKRMGASMPKQYLPLFGQPIALYSFHTFFHLVQVKEIIVVCDPSYKDIFEDAKGDYQAELKFALPGKERQDSVYNGFQAVDPNSELVCIHDSARPLVLSADVKKVLKDGLLNGAAVLGVPVKATIKEANRESFVVKTLDRKTLWEMQTPQVIKPELLRKGFELVNREGLEVTDDVSIVEHLKHPVYITQGSYTNIKVTTPDDMLLAERILNINDEDNIVLPVHL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo