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Integrating Genetics and Genomics to Advance Soybean Research


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Report for Sequence Feature Glyma.17G213000

Feature Type:gene_model
Chromosome:Gm17
Start:35353582
stop:35358772
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.17G213000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G80490.2AT TOPLESS-related 1 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated EnsemblGenomesN/AIEA
GO:0005515GO-mf protein binding EnsemblGenomesN/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
PTHR19932Panther WD REPEAT AND HMG-BOX DNA BINDING PROTEIN JGI N/AIEA
PTHR19932:SF11Panther JGI N/AIEA
PF00400PFAM WD domain, G-beta repeat JGI N/AIEA

Expression Patterns of Glyma.17G213000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.17G213000 not represented in the dataset
Glyma.17G213000 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.



Coding sequences of Glyma.17G213000
>Glyma.17g213000.1 sequence-type=CDS polypeptide=Glyma.17g213000.1.p locus=Glyma.17g213000 ID=Glyma.17g213000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTCACCTCGACAAGGACCTCACTCTCTTGGTCTTGCAGTACTTTAATGAAGAAAATTTGAAGGAAGCAGCACGCACGCTTGGGCATGAAAGTGGATTATACTTTGACTTGAAATATTTTGAGGACATAGTGCTTGAGGGAAAGTGGGATGAGACTGAGAACTATCTTTCAGCGTTCACAAAGGTCATGGATAACAAATTCTCAATCAAAATGTACTTTGAATTGAGGAAACAAAAATACTTTGAGGCTTTGGAAGTTAACGATCATCACAAGGCCCTAGATATCCTTCTGAAGGATCTAAAAGTCTTCGCCAATGGGAATGAAGCGTTGTTCAAGGACCTTAGTTACTTTCTGATTGTTGATAATATAAGGAACCTTAAACCATCATATGGAGATGTAAATTCTGCAAGAAAGGATTTGATGGTTGAACTCAAGGAAATTATAACTCATCATCCTCTTTTACGTGGAAAACTAAAATTTCCAATCATTGAAAGCCATAATAGGCTATGCTATCTTCTCAATCAAAGTTTTCACTCTATTTTCTTAATTTCATTATTTGAAAGAAATCTATTTGAGATTTGCACACCATCTCAGTGTCAGTTCTTGAAGCTCCCTATGCATCCCGAAGCAACAAAGATATTAAGATTGGCTTACTGTAATATGGGAGATTCCATTGTGGCATTAGCATCCAATGGTATCCATCTAGTTTGGCGCTGGCCACGTAATGGCTTTAACTTGGATGGCAAGGCTAGTGCACAATTTTGCTCTCAATTGTGGCACCCAAAGGACGGCCCGCAATTCATGATCAACGAACTTTTAAGTATCAAATGTGTAAACCCAGCTTCCTGTTTTGCTTATTCAAATGGATATATCATTTCAACATCAGGAGGGATGGTTTCCTTGTTTAATACTGTGACATTTAAGACTCTGACAACTATAATGTCACCACCACCTATGGTAACATCTCTTGCCTACTATCCCAAAGATAACAACATATTTGGTATTGGCTTTGATGACTCCACTATACTTATATACCATGTCCGTCAAGCTGAGGTTCTATTCAAGCTTGAGGGTCACTCTACAAGAGTTACTGCTATAGCCTTCTCATATTCTTCAAATATTCTTGTATCTGGAGATGCAAATGCCCAGATTATTCTATGGAATACAGATGGGTGGAAAAAGCTGAAAGATAAGCAATTACAAATACAAGGAAACCAGGTGTCAGTATGTGAAACTCAAATTCAATTTCACCCTGATCAGATAAACTTCCTTGTTGTACACCGTAGTCATCTTGCAATTTATGAAGCAACAGAACTAAAATGTGTCAACCAGTGGCTTCCAGAAGTTCCAATCCTTATCTCTCAAGCAACATTCTCATCTGATGGTCACACTGTGTATTCCATTTTTGGTGATGGGGCTGTGGCAATATTTGATGCTTCAAATTTTGAAATTCGTTGTAGGGTCTATCGGTCTTGTTATCTTCCTACAATTTCAAGATGGGGAGTCTACCCAATTTCTGTAGCTGCACATCCACAAAAACCAGCCCAGTTTGCTGTGGGGCTCTCAGATGGGAGTGTTTATGTGTTTGAGCCTCAAATGCCTGGGGGTGATTGGATCAAAAATCATTGA
Predicted protein sequences of Glyma.17G213000
>Glyma.17g213000.1.p sequence-type=predicted peptide transcript=Glyma.17g213000.1 locus=Glyma.17g213000 ID=Glyma.17g213000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAHLDKDLTLLVLQYFNEENLKEAARTLGHESGLYFDLKYFEDIVLEGKWDETENYLSAFTKVMDNKFSIKMYFELRKQKYFEALEVNDHHKALDILLKDLKVFANGNEALFKDLSYFLIVDNIRNLKPSYGDVNSARKDLMVELKEIITHHPLLRGKLKFPIIESHNRLCYLLNQSFHSIFLISLFERNLFEICTPSQCQFLKLPMHPEATKILRLAYCNMGDSIVALASNGIHLVWRWPRNGFNLDGKASAQFCSQLWHPKDGPQFMINELLSIKCVNPASCFAYSNGYIISTSGGMVSLFNTVTFKTLTTIMSPPPMVTSLAYYPKDNNIFGIGFDDSTILIYHVRQAEVLFKLEGHSTRVTAIAFSYSSNILVSGDANAQIILWNTDGWKKLKDKQLQIQGNQVSVCETQIQFHPDQINFLVVHRSHLAIYEATELKCVNQWLPEVPILISQATFSSDGHTVYSIFGDGAVAIFDASNFEIRCRVYRSCYLPTISRWGVYPISVAAHPQKPAQFAVGLSDGSVYVFEPQMPGGDWIKNH*






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