Glyma.17G199600

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Report for Sequence Feature Glyma.17G199600

Feature Type:	gene_model
Chromosome:	Gm17
Start:	31731965
stop:	31738073
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.17G199600

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G45330.1	AT	RNA 2'-phosphotransferase, Tpt1 / KptA family	JGI	N/A	IEA
GO:0006388	GO-bp	tRNA splicing, via endonucleolytic cleavage and ligation	EnsemblGenomes	N/A	IEA
GO:0006388	GO-bp	tRNA splicing, via endonucleolytic cleavage and ligation	JGI	N/A	IEA
GO:0005515	GO-mf	protein binding	EnsemblGenomes	N/A	IEA
GO:0005515	GO-mf	protein binding	JGI	N/A	IEA
GO:0016772	GO-mf	transferase activity, transferring phosphorus-containing groups	EnsemblGenomes	N/A	IEA
GO:0016772	GO-mf	transferase activity, transferring phosphorus-containing groups	JGI	N/A	IEA
KOG2278	KOG	RNA:NAD 2'-phosphotransferase TPT1	JGI	N/A	IEA
PTHR12684	Panther	PUTATIVE PHOSPHOTRANSFERASE	JGI	N/A	IEA
PF01885	PFAM	RNA 2'-phosphotransferase, Tpt1 / KptA family	JGI	N/A	IEA
PF02798	PFAM	Glutathione S-transferase, N-terminal domain	JGI	N/A	IEA

Expression Patterns of Glyma.17G199600

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.17G199600 not represented in the dataset	Glyma.17G199600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.17G199600 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.17g199600	Wm82.a4.v1	ISS	As supplied by JGI
Glyma17g29414	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.17G199600

Limit To All Plant Sequences

>Glyma.17g199600.2 sequence-type=transcript locus=Glyma.17g199600 ID=Glyma.17g199600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GCGTAGACATCGAACAAAGATGAAGCTGAAGGTATATGCGGACCGCATGTCCCAACCATCCCGTGCGATTCTCATATTTTACAAAGTGAATGGAATAGATTTTGAGGATGTCAAAGTCGATTTATCCCAACATCACCAGCTATCTCCCCAATTCCGAGTGATTAACCCTTTAATGAAAGTCCCTGCTGTTGTTGATGGAAGGTTCAAACTATTTGAGAGCACTGGCAGAGGAAAGACTTTTGATATGAGAAACGATAGAGAGAGAACAACAGGGTGTGGAGGTGGGAGTGGCTCAGGAAAGGACAAAATTGATTCTCTTAGTAGGCTCCTGACACGAATTTTACGGCATATGGCATCTGAATTGAATTTGAATATGCGGAGTGATGGTTATGTAAAAGTTAATGATTTGCTAAAGCTGAATCTGAAGACATTTGCTAATATTCCACTGAGATCGCACACTATTGATCATATTAGGGAGGCTGTTCGAAAAGATAATAAGCAGCGGTTTAGCCTCTTAGAAGAGAATGGGGAGCTACTAATACGTGCAAACCAAGGCCACACAGTAAAGGTCGTTGAAACTGAAAGTTTGTTGAAACCAATCCTTTCCGCCAAAGAATTTCCAGTTTGTTTGCATGGAACCTACAGAAAGAACCTAGAATCAATTCTAGGATCTGGTCTGAAGCGCATGAAGAGATTGCATGTTCATTTCTCTTGTGGTTTACCAACAGATGGAGAAGTAATTAGTGGTATGAGGCAGGATGTCAATGTTCTGATCTTTCTGGACGTTAGAAAAGCATTAGAAGAAAGTATAAAGCTTTACATTTCTGACAACAAGGTGATCTTGACGGAAGGTTTTGATGGTGTTGTTCCTCCGAAGTATTTTGAAAGGATAGAATCATGGCCGAGCAGACAGCCCATTTCTTTTTAAAGTTATTTTACAATTTTGCTTTTAGGATCACAATACGTTGAGGATTatttaaataaaataatatgaaaaa

>Glyma.17g199600.3 sequence-type=transcript locus=Glyma.17g199600 ID=Glyma.17g199600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ttcttattAATTTGTGTGTTATTTTCTTCTTTGCACTTGCAGTCATGCTATTCTCATATATCTTGCTTATGCATTTCCAGATAAATATATTTTACAGTTGCATGGTACAAGTATACAAAGAGTTTTTTCTTACAAAAATCGATATTGCAGAATTAATTAAATGTATCTGGACACCGGGAGAGTCCACATGCATCAGTCATGAAATAAAATTTAAAATTGAAAATACAATACGAGGAAAACATTGTAAGGAATACAATATAAGAAGCCTCGACCTTGGACTTGGAGTCTCTATTGTATATCATTTTCAATTCCAATCTCTCTCTTTCTAGACATAGATTTTGTGCAATGGCTGAAGAGAGACAAGTCATCGGCTTCCACACTGGTGATGCGTGGAAGGGCAACTCTAGAATGCAAAAGACTCCAAAAAACTGCACTGGCAGAGGAAAGACTTTTGATATGAGAAACGATAGAGAGAGAACAACAGGGTGTGGAGGTGGGAGTGGCTCAGGAAAGGACAAAATTGATTCTCTTAGTAGGCTCCTGACACGAATTTTACGGCATATGGCATCTGAATTGAATTTGAATATGCGGAGTGATGGTTATGTAAAAGTTAATGATTTGCTAAAGCTGAATCTGAAGACATTTGCTAATATTCCACTGAGATCGCACACTATTGATCATATTAGGGAGGCTGTTCGAAAAGATAATAAGCAGCGGTTTAGCCTCTTAGAAGAGAATGGGGAGCTACTAATACGTGCAAACCAAGGCCACACAGTAAAGGTCGTTGAAACTGAAAGTTTGTTGAAACCAATCCTTTCCGCCAAAGAATTTCCAGTTTGTTTGCATGGAACCTACAGAAAGAACCTAGAATCAATTCTAGGATCTGGTCTGAAGCGCATGAAGAGATTGCATGTTCATTTCTCTTGTGGTTTACCAACAGATGGAGAAGTAATTAGTGGTATGAGGCAGGATGTCAATGTTCTGATCTTTCTGGACGTTAGAAAAGCATTAGAAGAAAGTATAAAGCTTTACATTTCTGACAACAAGGTGATCTTGACGGAAGGTTTTGATGGTGTTGTTCCTCCGAAGTATTTTGAAAGGATAGAATCATGGCCGAGCAGACAGCCCATTTCTTTTTAAAGTTATTTTACAATTTTGCTTTTAGGATCACAATACGTTGAGGATTatttaaataaaataatatgaaaaa

>Glyma.17g199600.4 sequence-type=transcript locus=Glyma.17g199600 ID=Glyma.17g199600.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGTATTTTTATTCTTTGTATGTGTGGAAAGAAGTTTGGCAAAGGAAACCTTGACACGAATTTTACGGCATATGGCATCTGAATTGAATTTGAATATGCGGAGTGATGGTTATGTAAAAGTTAATGATTTGCTAAAGCTGAATCTGAAGACATTTGCTAATATTCCACTGAGATCGCACACTATTGATCATATTAGGGAGGCTGTTCGAAAAGATAATAAGCAGCGGTTTAGCCTCTTAGAAGAGAATGGGGAGCTACTAATACGTGCAAACCAAGGCCACACAGTAAAGGTCGTTGAAACTGAAAGTTTGTTGAAACCAATCCTTTCCGCCAAAGAATTTCCAGTTTGTTTGCATGGAACCTACAGAAAGAACCTAGAATCAATTCTAGGATCTGGTCTGAAGCGCATGAAGAGATTGCATGTTCATTTCTCTTGTGGTTTACCAACAGATGGAGAAGTAATTAGTGGTATGAGGCAGGATGTCAATGTTCTGATCTTTCTGGACGTTAGAAAAGCATTAGAAGAAAGTATAAAGCTTTACATTTCTGACAACAAGGTGATCTTGACGGAAGGTTTTGATGGTGTTGTTCCTCCGAAGTATTTTGAAAGGATAGAATCATGGCCGAGCAGACAGCCCATTTCTTTTTAAAGTTATTTTACAATTTTGCTTTTAGGATCACAATACGTTGAGGATTatttaaataaaataatatgaaaaa

Coding sequences of Glyma.17G199600

Limit To All Plant Sequences

>Glyma.17g199600.1 sequence-type=CDS polypeptide=Glyma.17g199600.1.p locus=Glyma.17g199600 ID=Glyma.17g199600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGCTGAAGGTATATGCGGACCGCATGTCCCAACCATCCCGTGCGATTCTCATATTTTACAAAGTGAATGGAATAGATTTTGAGGATGTCAAAGTCGATTTATCCCAACATCACCAGCTATCTCCCCAATTCCGAGTGATTAACCCTTTAATGAAAGTCCCTGCTGTTGTTGATGGAAGGTTCAAACTATTTGAGAGACATAGATTTTGTGCAATGGCTGAAGAGAGACAAGTCATCGGCTTCCACACTGGTGATGCGTGGAAGGGCAACTCTAGAATGCAAAAGACTCCAAAAAACTGCACTGGCAGAGGAAAGACTTTTGATATGAGAAACGATAGAGAGAGAACAACAGGGTGTGGAGGTGGGAGTGGCTCAGGAAAGGACAAAATTGATTCTCTTAGTAGGCTCCTGACACGAATTTTACGGCATATGGCATCTGAATTGAATTTGAATATGCGGAGTGATGGTTATGTAAAAGTTAATGATTTGCTAAAGCTGAATCTGAAGACATTTGCTAATATTCCACTGAGATCGCACACTATTGATCATATTAGGGAGGCTGTTCGAAAAGATAATAAGCAGCGGTTTAGCCTCTTAGAAGAGAATGGGGAGCTACTAATACGTGCAAACCAAGGCCACACAGTAAAGGTCGTTGAAACTGAAAGTTTGTTGAAACCAATCCTTTCCGCCAAAGAATTTCCAGTTTGTTTGCATGGAACCTACAGAAAGAACCTAGAATCAATTCTAGGATCTGGTCTGAAGCGCATGAAGAGATTGCATGTTCATTTCTCTTGTGGTTTACCAACAGATGGAGAAGTAATTAGTGGTATGAGGCAGGATGTCAATGTTCTGATCTTTCTGGACGTTAGAAAAGCATTAGAAGAAAGTATAAAGCTTTACATTTCTGACAACAAGGTGATCTTGACGGAAGGTTTTGATGGTGTTGTTCCTCCGAAGTATTTTGAAAGGATAGAATCATGGCCGAGCAGACAGCCCATTTCTTTTTAA

>Glyma.17g199600.2 sequence-type=CDS polypeptide=Glyma.17g199600.2.p locus=Glyma.17g199600 ID=Glyma.17g199600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGCTGAAGGTATATGCGGACCGCATGTCCCAACCATCCCGTGCGATTCTCATATTTTACAAAGTGAATGGAATAGATTTTGAGGATGTCAAAGTCGATTTATCCCAACATCACCAGCTATCTCCCCAATTCCGAGTGATTAACCCTTTAATGAAAGTCCCTGCTGTTGTTGATGGAAGGTTCAAACTATTTGAGAGCACTGGCAGAGGAAAGACTTTTGATATGAGAAACGATAGAGAGAGAACAACAGGGTGTGGAGGTGGGAGTGGCTCAGGAAAGGACAAAATTGATTCTCTTAGTAGGCTCCTGACACGAATTTTACGGCATATGGCATCTGAATTGAATTTGAATATGCGGAGTGATGGTTATGTAAAAGTTAATGATTTGCTAAAGCTGAATCTGAAGACATTTGCTAATATTCCACTGAGATCGCACACTATTGATCATATTAGGGAGGCTGTTCGAAAAGATAATAAGCAGCGGTTTAGCCTCTTAGAAGAGAATGGGGAGCTACTAATACGTGCAAACCAAGGCCACACAGTAAAGGTCGTTGAAACTGAAAGTTTGTTGAAACCAATCCTTTCCGCCAAAGAATTTCCAGTTTGTTTGCATGGAACCTACAGAAAGAACCTAGAATCAATTCTAGGATCTGGTCTGAAGCGCATGAAGAGATTGCATGTTCATTTCTCTTGTGGTTTACCAACAGATGGAGAAGTAATTAGTGGTATGAGGCAGGATGTCAATGTTCTGATCTTTCTGGACGTTAGAAAAGCATTAGAAGAAAGTATAAAGCTTTACATTTCTGACAACAAGGTGATCTTGACGGAAGGTTTTGATGGTGTTGTTCCTCCGAAGTATTTTGAAAGGATAGAATCATGGCCGAGCAGACAGCCCATTTCTTTTTAA

>Glyma.17g199600.3 sequence-type=CDS polypeptide=Glyma.17g199600.3.p locus=Glyma.17g199600 ID=Glyma.17g199600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTGAAGAGAGACAAGTCATCGGCTTCCACACTGGTGATGCGTGGAAGGGCAACTCTAGAATGCAAAAGACTCCAAAAAACTGCACTGGCAGAGGAAAGACTTTTGATATGAGAAACGATAGAGAGAGAACAACAGGGTGTGGAGGTGGGAGTGGCTCAGGAAAGGACAAAATTGATTCTCTTAGTAGGCTCCTGACACGAATTTTACGGCATATGGCATCTGAATTGAATTTGAATATGCGGAGTGATGGTTATGTAAAAGTTAATGATTTGCTAAAGCTGAATCTGAAGACATTTGCTAATATTCCACTGAGATCGCACACTATTGATCATATTAGGGAGGCTGTTCGAAAAGATAATAAGCAGCGGTTTAGCCTCTTAGAAGAGAATGGGGAGCTACTAATACGTGCAAACCAAGGCCACACAGTAAAGGTCGTTGAAACTGAAAGTTTGTTGAAACCAATCCTTTCCGCCAAAGAATTTCCAGTTTGTTTGCATGGAACCTACAGAAAGAACCTAGAATCAATTCTAGGATCTGGTCTGAAGCGCATGAAGAGATTGCATGTTCATTTCTCTTGTGGTTTACCAACAGATGGAGAAGTAATTAGTGGTATGAGGCAGGATGTCAATGTTCTGATCTTTCTGGACGTTAGAAAAGCATTAGAAGAAAGTATAAAGCTTTACATTTCTGACAACAAGGTGATCTTGACGGAAGGTTTTGATGGTGTTGTTCCTCCGAAGTATTTTGAAAGGATAGAATCATGGCCGAGCAGACAGCCCATTTCTTTTTAA

>Glyma.17g199600.4 sequence-type=CDS polypeptide=Glyma.17g199600.4.p locus=Glyma.17g199600 ID=Glyma.17g199600.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCATCTGAATTGAATTTGAATATGCGGAGTGATGGTTATGTAAAAGTTAATGATTTGCTAAAGCTGAATCTGAAGACATTTGCTAATATTCCACTGAGATCGCACACTATTGATCATATTAGGGAGGCTGTTCGAAAAGATAATAAGCAGCGGTTTAGCCTCTTAGAAGAGAATGGGGAGCTACTAATACGTGCAAACCAAGGCCACACAGTAAAGGTCGTTGAAACTGAAAGTTTGTTGAAACCAATCCTTTCCGCCAAAGAATTTCCAGTTTGTTTGCATGGAACCTACAGAAAGAACCTAGAATCAATTCTAGGATCTGGTCTGAAGCGCATGAAGAGATTGCATGTTCATTTCTCTTGTGGTTTACCAACAGATGGAGAAGTAATTAGTGGTATGAGGCAGGATGTCAATGTTCTGATCTTTCTGGACGTTAGAAAAGCATTAGAAGAAAGTATAAAGCTTTACATTTCTGACAACAAGGTGATCTTGACGGAAGGTTTTGATGGTGTTGTTCCTCCGAAGTATTTTGAAAGGATAGAATCATGGCCGAGCAGACAGCCCATTTCTTTTTAA

Predicted protein sequences of Glyma.17G199600

Limit To All Plant Sequences

>Glyma.17g199600.1.p sequence-type=predicted peptide transcript=Glyma.17g199600.1 locus=Glyma.17g199600 ID=Glyma.17g199600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKLKVYADRMSQPSRAILIFYKVNGIDFEDVKVDLSQHHQLSPQFRVINPLMKVPAVVDGRFKLFERHRFCAMAEERQVIGFHTGDAWKGNSRMQKTPKNCTGRGKTFDMRNDRERTTGCGGGSGSGKDKIDSLSRLLTRILRHMASELNLNMRSDGYVKVNDLLKLNLKTFANIPLRSHTIDHIREAVRKDNKQRFSLLEENGELLIRANQGHTVKVVETESLLKPILSAKEFPVCLHGTYRKNLESILGSGLKRMKRLHVHFSCGLPTDGEVISGMRQDVNVLIFLDVRKALEESIKLYISDNKVILTEGFDGVVPPKYFERIESWPSRQPISF*

>Glyma.17g199600.2.p sequence-type=predicted peptide transcript=Glyma.17g199600.2 locus=Glyma.17g199600 ID=Glyma.17g199600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKLKVYADRMSQPSRAILIFYKVNGIDFEDVKVDLSQHHQLSPQFRVINPLMKVPAVVDGRFKLFESTGRGKTFDMRNDRERTTGCGGGSGSGKDKIDSLSRLLTRILRHMASELNLNMRSDGYVKVNDLLKLNLKTFANIPLRSHTIDHIREAVRKDNKQRFSLLEENGELLIRANQGHTVKVVETESLLKPILSAKEFPVCLHGTYRKNLESILGSGLKRMKRLHVHFSCGLPTDGEVISGMRQDVNVLIFLDVRKALEESIKLYISDNKVILTEGFDGVVPPKYFERIESWPSRQPISF*

>Glyma.17g199600.3.p sequence-type=predicted peptide transcript=Glyma.17g199600.3 locus=Glyma.17g199600 ID=Glyma.17g199600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAEERQVIGFHTGDAWKGNSRMQKTPKNCTGRGKTFDMRNDRERTTGCGGGSGSGKDKIDSLSRLLTRILRHMASELNLNMRSDGYVKVNDLLKLNLKTFANIPLRSHTIDHIREAVRKDNKQRFSLLEENGELLIRANQGHTVKVVETESLLKPILSAKEFPVCLHGTYRKNLESILGSGLKRMKRLHVHFSCGLPTDGEVISGMRQDVNVLIFLDVRKALEESIKLYISDNKVILTEGFDGVVPPKYFERIESWPSRQPISF*

>Glyma.17g199600.4.p sequence-type=predicted peptide transcript=Glyma.17g199600.4 locus=Glyma.17g199600 ID=Glyma.17g199600.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MASELNLNMRSDGYVKVNDLLKLNLKTFANIPLRSHTIDHIREAVRKDNKQRFSLLEENGELLIRANQGHTVKVVETESLLKPILSAKEFPVCLHGTYRKNLESILGSGLKRMKRLHVHFSCGLPTDGEVISGMRQDVNVLIFLDVRKALEESIKLYISDNKVILTEGFDGVVPPKYFERIESWPSRQPISF*

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