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Report for Sequence Feature Glyma.17G195900

Feature Type:gene_model
Chromosome:Gm17
Start:30341676
stop:30351385
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.17G195900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G28880.1AT casein kinase I-like 3 JGI N/AIEA
GO:0006468GO-bp protein phosphorylation EnsemblGenomesN/AIEA
GO:0006468GO-bp protein phosphorylation JGI N/AIEA
GO:0006897GO-bp endocytosis EnsemblGenomesN/AIEA
GO:0008360GO-bp regulation of cell shape EnsemblGenomesN/AIEA
GO:0018105GO-bp peptidyl-serine phosphorylation EnsemblGenomesN/AIEA
GO:0005634GO-cc nucleus EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0000166GO-mf nucleotide binding EnsemblGenomesN/AIEA
GO:0004672GO-mf protein kinase activity EnsemblGenomesN/AIEA
GO:0004672GO-mf protein kinase activity JGI N/AIEA
GO:0004674GO-mf protein serine/threonine kinase activity EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
KOG1163 KOG Casein kinase (serine/threonine/tyrosine protein kinase) JGI N/AIEA
PTHR11909Panther CASEIN KINASE-RELATED JGI N/AIEA
PTHR11909:SF18Panther GILGAMESH, ISOFORM G JGI N/AIEA
PF00069PFAM Protein kinase domain JGI N/AIEA

Expression Patterns of Glyma.17G195900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.17G195900 not represented in the dataset
Glyma.17G195900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.17G195900 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.17g195900 Wm82.a4.v1ISS As supplied by JGI
Glyma17g28694 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.17G195900
>Glyma.17g195900.2 sequence-type=transcript locus=Glyma.17g195900 ID=Glyma.17g195900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CTGATAGCAAAAACTCGTTTTTTGCTTTCCCTCTGTGCGAACTGCGAAGCTCAAAAGCTTCGTCGTTTCGTTTTCACCACGTCGTATTGTTATTGCCGTTGCTATTTTTTTACCTGTCGTTTTATTGGTTCGGCTGTAATGGAGAGGGTCCTTGGAGGAAAGTTTAAAGTCGGTAAAAAAATTGGGAGCGGATCATTCGGTGAAATTCACATTGGGGCACATATCGAGACTTCTGAAATTGTGGCCATCAAGATGGAGAACAGGAAAACCAATCAGCCACAGCTACAGTTTGAGGCCAAGTTATATAGTACTCTTCAAGGAGGAAGTGGTATTCCAAGAATGAAATGGTGTGGTACTGATGGAGACAGCAATGTTCTTGTTATTGAACTTCTCGGACCGAGTCTTGAAGACCTCTTTTTCTTCTGTGGGAATAAATTTTCACTCAAAACAGTTTTGATGTTGGCTGATCAGTTGCTTACAAGGATAGAGTACTTGCACTCCAAAGGATTTTTGCATAGGGATATCAAACCGGATAACTTCCTTATGGGTCTTGGGAAGAAAGCAAATCAGGTTTATATGATTGATTTTGGACTAGCAAAAGAATATAGGGACCCTTTCACAAATAAGCATATCCCTTACAGAGAGAACAAAGGCTTAACAGGGACTGCACGTTATGCAAGTTACAATGCTCACTCAGGAATTGAGCAAAGTCGTCGAGATGATTTGGAGTCTCTTGGCTATGTTTTAATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTTTGCAAGCTGTCACCAAAAGGCAAAAATATGACAAAATTTGCAAAAAGAAGTTATCAACTCCCATTGAGATACTATGCAAGTCATATCCTGTGGAATTTGCTTCTTACTTTCATTACTGCCGCTCCTTGACATTTGATCAACGGCCAGATTATGGTCTTTTAAAGCGCCTGTTTCGTAATTTGTTCACTCGTGCAGGATATGATTCTGACTATTTATTTGACTGGACCATTCTAAAATATCAACAGATGCAACAGGAAAAGACACAAAGTCAACCACCTGCTCCACTAGCTGTGCCTACCAGTCTTGAACCAGTGGATGAGGATAATCATAAAGGAGTCAATGATTCCATTAAAATTGCTGTGGCAACACCAAAAGTCAATGTTGATCATCAACGTGTTTTTAAGACAACGGCATCTAATGTTCAGAATCTTAATGCCAAGATTCCAGAGAAACATATTGTGAACAATGGTTCATCTGTGCCAACTGCTATGCCCAGAGTTTCCATAGAAAATGCCACAAAACAAGTAAGGCCTGCAGGAACCTCAAATGTGGGTCATGGATTAGGGAATAAGACTGGTGCTTCAGGATGCATTGTTCCTTCACTACGCCGAACTTCGTCAACCAGACAATAGGTGTCACCAATTTACCCGAGCATGACACAATCCTATCAAATGCATTGGTGGACAACATAACATGCTCAGTGAGATAAATGTCCTCATTAAAGATTTTGGGAAGAGGGAAAAAGTAGGGTATGGAGAAAGTTGAAGACTATGATGGTAGCTGTTGCCTGCAGAGAGGGAACGTGGTCAATATGCAAGGGATTCAACTCAACTATCTCCTGACATGATTTCCCATTTGAAAAATAATATTCAGCTCAAAATAACTACAACAACAAAGTCTTATCTTATTGGAGTGAGATCAATTAAAATAATCACACGACACTATTATGTTCAAAATAACAACAACAAAAAAAAAAACTAACCTATTAATTGGGGGGTTGGCATTTGCTCTGTATTTGTGACGAATCAAACATGCATGGGTGAAGAGATGTGGCAATCCTTCTTTTGGTCACGGTCATCTATCAATCAATATTTGTTTTTCTTTGAAGCTTTTTGCCTATGACTATGTACAGTTAAATTTGTCGGTTTACATTTAATATTTAATAATTTGTTTAAAAATGAATCCAAATATCGAATTCATAGTGTTTTGAACCG
Coding sequences of Glyma.17G195900
>Glyma.17g195900.1 sequence-type=CDS polypeptide=Glyma.17g195900.1.p locus=Glyma.17g195900 ID=Glyma.17g195900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGAGGGTCCTTGGAGGAAAGTTTAAAGTCGGTAAAAAAATTGGGAGCGGATCATTCGGTGAAATTCACATTGGGGCACATATCGAGACTTCTGAAATTGTGGCCATCAAGATGGAGAACAGGAAAACCAATCAGCCACAGCTACAGTTTGAGGCCAAGTTATATAGTACTCTTCAAGGAGGAAGTGGTATTCCAAGAATGAAATGGTGTGGTACTGATGGAGACAGCAATGTTCTTGTTATTGAACTTCTCGGACCGAGTCTTGAAGACCTCTTTTTCTTCTGTGGGAATAAATTTTCACTCAAAACAGTTTTGATGTTGGCTGATCAGTTGCTTACAAGGATAGAGTACTTGCACTCCAAAGGATTTTTGCATAGGGATATCAAACCGGATAACTTCCTTATGGGTCTTGGGAAGAAAGCAAATCAGGTTTATATGATTGATTTTGGACTAGCAAAAGAATATAGGGACCCTTTCACAAATAAGCATATCCCTTACAGAGAGAACAAAGGCTTAACAGGGACTGCACGTTATGCAAGTTACAATGCTCACTCAGGAATTGAGCAAAGTCGTCGAGATGATTTGGAGTCTCTTGGCTATGTTTTAATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTTTGCAAGCTGTCACCAAAAGGCAAAAATATGACAAAATTTGCAAAAAGAAGTTATCAACTCCCATTGAGATACTATGCAAGTCATATCCTGTGGAATTTGCTTCTTACTTTCATTACTGCCGCTCCTTGACATTTGATCAACGGCCAGATTATGGTCTTTTAAAGCGCCTGTTTCGTAATTTGTTCACTCGTGCAGGATATGATTCTGACTATTTATTTGACTGGACCATTCTAAAATATCAACAGATGCAACAGGAAAAGACACAAAGTCAACCACCTGCTCCACTAGCTGTGCCTACCAGTCTTGAACCAGTGGATGAGGATAATCATAAAGGAGTCAATGATTCCATTAAAATTGCTGTGGCAACACCAAAAGTCAATGTTGATCATCAACGTGTTTTTAAGACAACGGCATCTAATGTTCAGAATCTTAATGCCAAGATTCCAGAGAAACATATTGTGAACAATGGTTCATCTGTGCCAACTGCTATGCCCAGAGTTTCCATAGAAAATGCCACAAAACAAGTAAGGCCTGCAGGAACCTCAAATGTGGGTCATGGATTAGGGAATAAGACTGGTGCTTCAGGATGCATTGTTCCTTCACTACGCCGAACTTCGTCAACCAGACAATAG

>Glyma.17g195900.2 sequence-type=CDS polypeptide=Glyma.17g195900.2.p locus=Glyma.17g195900 ID=Glyma.17g195900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGAGGGTCCTTGGAGGAAAGTTTAAAGTCGGTAAAAAAATTGGGAGCGGATCATTCGGTGAAATTCACATTGGGGCACATATCGAGACTTCTGAAATTGTGGCCATCAAGATGGAGAACAGGAAAACCAATCAGCCACAGCTACAGTTTGAGGCCAAGTTATATAGTACTCTTCAAGGAGGAAGTGGTATTCCAAGAATGAAATGGTGTGGTACTGATGGAGACAGCAATGTTCTTGTTATTGAACTTCTCGGACCGAGTCTTGAAGACCTCTTTTTCTTCTGTGGGAATAAATTTTCACTCAAAACAGTTTTGATGTTGGCTGATCAGTTGCTTACAAGGATAGAGTACTTGCACTCCAAAGGATTTTTGCATAGGGATATCAAACCGGATAACTTCCTTATGGGTCTTGGGAAGAAAGCAAATCAGGTTTATATGATTGATTTTGGACTAGCAAAAGAATATAGGGACCCTTTCACAAATAAGCATATCCCTTACAGAGAGAACAAAGGCTTAACAGGGACTGCACGTTATGCAAGTTACAATGCTCACTCAGGAATTGAGCAAAGTCGTCGAGATGATTTGGAGTCTCTTGGCTATGTTTTAATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTTTGCAAGCTGTCACCAAAAGGCAAAAATATGACAAAATTTGCAAAAAGAAGTTATCAACTCCCATTGAGATACTATGCAAGTCATATCCTGTGGAATTTGCTTCTTACTTTCATTACTGCCGCTCCTTGACATTTGATCAACGGCCAGATTATGGTCTTTTAAAGCGCCTGTTTCGTAATTTGTTCACTCGTGCAGGATATGATTCTGACTATTTATTTGACTGGACCATTCTAAAATATCAACAGATGCAACAGGAAAAGACACAAAGTCAACCACCTGCTCCACTAGCTGTGCCTACCAGTCTTGAACCAGTGGATGAGGATAATCATAAAGGAGTCAATGATTCCATTAAAATTGCTGTGGCAACACCAAAAGTCAATGTTGATCATCAACGTGTTTTTAAGACAACGGCATCTAATGTTCAGAATCTTAATGCCAAGATTCCAGAGAAACATATTGTGAACAATGGTTCATCTGTGCCAACTGCTATGCCCAGAGTTTCCATAGAAAATGCCACAAAACAAGTAAGGCCTGCAGGAACCTCAAATGTGGGTCATGGATTAGGGAATAAGACTGGTGCTTCAGGATGCATTGTTCCTTCACTACGCCGAACTTCGTCAACCAGACAATAG
Predicted protein sequences of Glyma.17G195900
>Glyma.17g195900.1.p sequence-type=predicted peptide transcript=Glyma.17g195900.1 locus=Glyma.17g195900 ID=Glyma.17g195900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MERVLGGKFKVGKKIGSGSFGEIHIGAHIETSEIVAIKMENRKTNQPQLQFEAKLYSTLQGGSGIPRMKWCGTDGDSNVLVIELLGPSLEDLFFFCGNKFSLKTVLMLADQLLTRIEYLHSKGFLHRDIKPDNFLMGLGKKANQVYMIDFGLAKEYRDPFTNKHIPYRENKGLTGTARYASYNAHSGIEQSRRDDLESLGYVLMYFLRGSLPWQGLQAVTKRQKYDKICKKKLSTPIEILCKSYPVEFASYFHYCRSLTFDQRPDYGLLKRLFRNLFTRAGYDSDYLFDWTILKYQQMQQEKTQSQPPAPLAVPTSLEPVDEDNHKGVNDSIKIAVATPKVNVDHQRVFKTTASNVQNLNAKIPEKHIVNNGSSVPTAMPRVSIENATKQVRPAGTSNVGHGLGNKTGASGCIVPSLRRTSSTRQ*

>Glyma.17g195900.2.p sequence-type=predicted peptide transcript=Glyma.17g195900.2 locus=Glyma.17g195900 ID=Glyma.17g195900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MERVLGGKFKVGKKIGSGSFGEIHIGAHIETSEIVAIKMENRKTNQPQLQFEAKLYSTLQGGSGIPRMKWCGTDGDSNVLVIELLGPSLEDLFFFCGNKFSLKTVLMLADQLLTRIEYLHSKGFLHRDIKPDNFLMGLGKKANQVYMIDFGLAKEYRDPFTNKHIPYRENKGLTGTARYASYNAHSGIEQSRRDDLESLGYVLMYFLRGSLPWQGLQAVTKRQKYDKICKKKLSTPIEILCKSYPVEFASYFHYCRSLTFDQRPDYGLLKRLFRNLFTRAGYDSDYLFDWTILKYQQMQQEKTQSQPPAPLAVPTSLEPVDEDNHKGVNDSIKIAVATPKVNVDHQRVFKTTASNVQNLNAKIPEKHIVNNGSSVPTAMPRVSIENATKQVRPAGTSNVGHGLGNKTGASGCIVPSLRRTSSTRQ*






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