SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16g218700

Feature Type:gene_model
Chromosome:Gm16
Start:37833686
stop:37839688
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g218700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G22110.1AT ATDPB2,CYL2,DPB2 JGI N/AIEA
2.7.7.7EC DNA-directed DNA polymerase JGI N/AIEA
GO:0006260GO-bp DNA replication JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0003887GO-mf DNA-directed DNA polymerase activity JGI N/AIEA
K02325KEGG DNA repair and recombination proteins JGI N/AIEA
KOG3818 KOG DNA polymerase epsilon, subunit B JGI N/AIEA
PTHR12708PantherFam DNA POLYMERASE EPSILON SUBUNIT B JGI N/AIEA
PF04042Pfam DNA polymerase alpha/epsilon subunit B JGI N/AIEA

Gene model name correspondences to Glyma.16g218700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g34470 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g218700
>Glyma.16g218700.2 sequence-type=CDS polypeptide=Glyma.16g218700.2.p locus=Glyma.16g218700 id=Glyma.16g218700.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAATGCTTCAATGAGGAAAAAGGTTCAAAGGAAGTGTAAGATAAGAGGCTACAACCTCAAAGTCGACGCTCTGAACGAGATCCTCTCCTTCGCATCTCGCTTCGAAGGCCCCGACGAGGACGAAGCCATCGATCTCCTCCTCGTCGAGCTCGATTCATCTCTGAAATCCACCATAATCGACAAGGAGACGGTGCAGCGCGTGGTCAGCCTGTTGCTGGAAGCCACCGAGGCCACCGAGGAAACCTCCGATGCCGCCGCTGCCATTCGCGTCGTCGATGCGTTCCTCATCCCCAAGTATAAATACGACTATAGCAGAAAGCAGTTCTACGAGCACACAGGCAGCTTATCTATTCATGGAGAAGCATCAGCAAAGTCAGATCTGTACAGGGAAAGGTTTCTGTTGTTGTTCCAGAGGCTCTCTCGTGACCAGCATTTTTCAGCGCCTGCTTTTGAATCTGAATTTTCACATTTTGGGAGCTGTGAGATATCTCCCATTCAATCTCTGGTTGGGCAAACAGGTAGAAGATGGGTAATGGGAGTAATATCTCAGCTGGAGGATGGCCATTACTATTTGGAAGACCTTACAGCTGCAGTTAAAATCAACTTGTCCAATGCAAGGATAACTACAGGACTCTTTTCAGAGAACACTATAGTTGTGGCTGAAGGGGAGATGCTTGTGGAGGGTATTTTTCAGGTCTTAACATGTGGATTTCCTCCTTTGGAGGATAGAGATAAGTCAGTTACACTACTTGCAGGGCATGACTTTTTTGGCGCGGGTACTTTCACTAAAGAGGAAACTATTAGACTGGCAGAGATGGAAGAAAAAGCAGTAAATGACATGTTTATTATACTTTCTGATATTTGGCTAGACAATGAAGAGACTTTGAAAAAGCTAGAGGTTGTTCTGGATGGCTTTGAGAAGGAGATAGTGGTTCCTTCCTTATTTGTTTTCATGGGAAACTTCTCTTCTAAGCCATGTAACCTTTCATTTCATTTTTATTCGAGCCTCAGAATGCAGTTTGGTAAGCTGGGGGAAATGATTGCTGCCCATACACGACTAAAAGAGCACAGTAAATTTCTGTTTATTCCAGGTCCTGATGATGCAGGTCCTTCAAATGTTCTTCCTAGATGTGCTTTACCAAAATATTTAACTGAAGAGCTCCAAAAGCACATTCCCAATGCCATATTTTCAAGCAACCCCTGCAGGGTCAAATTTTATACCCAAGAAATTGTATTCTTCCGCCAGGATATGCTGTATAGAATGCGCCGTTCATGTTTGATGCCTCCTTCTACAGAAGAGACTTGTGATCATTTTGAACATCTTGTTGCTACCATAACCCATCAGAGTCATCTATGTCCACTTCCTCTAACCGTACAACCCATCATCTGGAATTATGACCATTGTCTTTATCTTTATCCAACTCCACACACGATAGTTTTGGGAGACAGAAGTCAGCAGAAGGCATTCAAGTACACAGGAATCACTTGTTTTAATACAGGTTCCTTCGCAATTGACAACACATTTGTGGCATATCGTCCCTGCTCTCAGGAAGTTGAATTGTCAGCCTTGCCATAA
Predicted protein sequences of Glyma.16g218700
>Glyma.16g218700.2.p sequence-type=predicted peptide transcript=Glyma.16g218700.2 locus=Glyma.16g218700 id=Glyma.16g218700.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNASMRKKVQRKCKIRGYNLKVDALNEILSFASRFEGPDEDEAIDLLLVELDSSLKSTIIDKETVQRVVSLLLEATEATEETSDAAAAIRVVDAFLIPKYKYDYSRKQFYEHTGSLSIHGEASAKSDLYRERFLLLFQRLSRDQHFSAPAFESEFSHFGSCEISPIQSLVGQTGRRWVMGVISQLEDGHYYLEDLTAAVKINLSNARITTGLFSENTIVVAEGEMLVEGIFQVLTCGFPPLEDRDKSVTLLAGHDFFGAGTFTKEETIRLAEMEEKAVNDMFIILSDIWLDNEETLKKLEVVLDGFEKEIVVPSLFVFMGNFSSKPCNLSFHFYSSLRMQFGKLGEMIAAHTRLKEHSKFLFIPGPDDAGPSNVLPRCALPKYLTEELQKHIPNAIFSSNPCRVKFYTQEIVFFRQDMLYRMRRSCLMPPSTEETCDHFEHLVATITHQSHLCPLPLTVQPIIWNYDHCLYLYPTPHTIVLGDRSQQKAFKYTGITCFNTGSFAIDNTFVAYRPCSQEVELSALP*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo