SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16g218500

Feature Type:gene_model
Chromosome:Gm16
Start:37822245
stop:37826820
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g218500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G17760.2AT GAD5 JGI N/AIEA
4.1.1.15EC glutamate decarboxylase JGI N/AIEA
GO:0019752GO-bp carboxylic acid metabolic process JGI N/AIEA
GO:0016831GO-mf carboxy-lyase activity JGI N/AIEA
GO:0030170GO-mf pyridoxal phosphate binding JGI N/AIEA
K01580KEGG Type I diabetes mellitus JGI N/AIEA
PTHR11999PantherFam GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE JGI N/AIEA
PF00282Pfam Pyridoxal-dependent decarboxylase conserved domain JGI N/AIEA

Gene model name correspondences to Glyma.16g218500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g34450 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g218500
>Glyma.16g218500.1 sequence-type=CDS polypeptide=Glyma.16g218500.1.p locus=Glyma.16g218500 id=Glyma.16g218500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTTCTCACATCCACTGCCACACACCCAGATGAACAAGACCAGAGCCTAAACTATACTTTTGCTTCCAGATATGTGCGTGAACCTATTCCAAAGTTCAAGATGCCGGAGAAATCCATACCAAAAGATGCTGCTTATCAGATAATAAACGATGAGTTGATGTTGGATGGTGCACCAAGGCTCAACTTGGCCTCGTTTGTGACCACTTGGATGGAGCCTGAGTGTGACAAGCTCATAATGGCTTCACTTAACAAGAACTACGTTGACATGGATGAGTATCCTGTCACCACTGAGCTCCAGAACCGGTGTGTTAATATCATAGCAAATCTATTCCATGCTCCTATAAGTGATGATGAGACTGCAGTAGGTGTGGGAACTGTGGGGTCATCGGAGGCAATAATGTTGGCAGGTCTAGCTTTTAAAAGGAAATGGCAGACAAAGAGAAAAGCAGAAGGCAAACCATATGATAAGCCCAACATAGTAACTGGGGCTAATGTGCAGGTTTGTTGGGAAAAATTTGCAAGGTACTTTGAGGTAGAGCTCAAGGAAGTGAAACTCAAAGAAGGATACTATGTGATGGACCCTGCGAAAGCAGTTGAAATGGTAGATGAGAACACCATCTGTGTTGCAGCCATTTTGGGGTCAACTATGACCGGAGAGTTTGAGGATGTGAAGCTTCTCGATGAACTTCTTACTAAAAAGAACAATGAGACAGGTTGGGATACCCCAATTCATGTAGATGCTGCCAGTGGGGGGTTTATTGCCCCATTTCTATATCCTGATTTAGAGTGGGACTTCCGTTTGCCGTTGGTGAAAAGCATCAATGTTAGTGGTCACAAGTATGGTCTTGTCTACCCTGGTGTTGGTTGGGTTGTATGGAGGAGCAAAGATGACTTGCCAGATGAACTTGTTTTTCACATAAATTATCTTGGATCTGATCAGCCCACTTTCACATTGAATTTCTCCAAAGGATCTAGTCAAATTATTGCTCAATATTATCAATTGATTCGGCTTGGCTTTGAGGGTTACAAAAATATCATGGAAAATTGCTGGGAGAATGCAAGAGTTCTGAAGGAAGGAATCGAGAGAACAGGTCGGTTTAACATCATCTCCAAGGATATCGGTGTGCCACTTGTAGCCTTCTCCTTGAAAGACAGTAGTCAACACACAGTGTTTGAGATAGCAGACCATCTGAGAAAATTCGGGTGGATAGTTCCTGCCTATACAATGCCACCAGATGCTCAACACATTGCTGTCCTTCGGGTGGTGATCAGGGAGGATTTCAGCCGCGGCTTGGCCGAGAGACTCGCCGCTGACATAGAGAAAGTTGTGAAGCTCTTGGACACACTTCCTAGCCCCCTCACTACCAAAGCTGTTCATATCACAGCTATCACTAGTGAGACTGGTGAGAAGATTAAGAAAGCTGCAATAGAGACTCAGAAAGAGATTGCTTTCTACTGGAAGCGACTTGTGGATGGCAAGAGACTTGGAGCATGCTAG
Predicted protein sequences of Glyma.16g218500
>Glyma.16g218500.1.p sequence-type=predicted peptide transcript=Glyma.16g218500.1 locus=Glyma.16g218500 id=Glyma.16g218500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVLTSTATHPDEQDQSLNYTFASRYVREPIPKFKMPEKSIPKDAAYQIINDELMLDGAPRLNLASFVTTWMEPECDKLIMASLNKNYVDMDEYPVTTELQNRCVNIIANLFHAPISDDETAVGVGTVGSSEAIMLAGLAFKRKWQTKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLKEGYYVMDPAKAVEMVDENTICVAAILGSTMTGEFEDVKLLDELLTKKNNETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRSKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQLIRLGFEGYKNIMENCWENARVLKEGIERTGRFNIISKDIGVPLVAFSLKDSSQHTVFEIADHLRKFGWIVPAYTMPPDAQHIAVLRVVIREDFSRGLAERLAADIEKVVKLLDTLPSPLTTKAVHITAITSETGEKIKKAAIETQKEIAFYWKRLVDGKRLGAC*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo