SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16g216200

Feature Type:gene_model
Chromosome:Gm16
Start:37557452
stop:37565270
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g216200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G27760.1AT FEY,FEY3 JGI N/AIEA
1.1.1.300EC NADP-retinol dehydrogenase JGI N/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity JGI N/AIEA
KOG1208 KOG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) JGI N/AIEA
PTHR24320PantherFam RETINOL DEHYDROGENASE JGI N/AIEA
PF00106Pfam short chain dehydrogenase JGI N/AIEA

Gene model name correspondences to Glyma.16g216200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g34190 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g216200
>Glyma.16g216200.11 sequence-type=CDS polypeptide=Glyma.16g216200.11.p locus=Glyma.16g216200 id=Glyma.16g216200.11.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAACGACGTCGTCTTCAAGCGAGGAAGCACCGAACACTAAGAAGAACAAGAAGGAGTGTTTAGGTTGGATAGAATGGTTAAGAGGTTGGTTCTATGTGGTCTACGAAATGCTCTTTCAGCGCATCATGGCGAGTCATTTGCACAACCCCATGCCTCTCCCTCCCGTCAACGACCTCACCTGCATTGTCACCGGCTCCACCAGCGGCATTGGCCTCGAAATCGCAAGGCAATTAGCACAGTCAGGGGCCCATGTTGTTATGGCTGTCAGGAACACAAAGGCAGCTCAGGAGTTGATCCAGAAGTGGCAAGTTGACTCTGAAGGATTGAGTATTCCTCTCAATGTTGAGGTGATGCAAGTTGATCTTCTCTCATTGGATTCTGTCACGAGGTTTGCTGAAGCATGGAATGCACGCTCAGCACCCTTACATGTTCTCATCAATAATGCTGGGATTTTTTCCATTGGAGAGCCACAAAAGTTCTCCAAAGATGGTTATGAACAGCACTTGCAAGTGAATCATCTTGCTCCTGCCTTGCTTTCAATACTTCTTTTGCCATCCCTTATTAGGGGTTCTCCTAGTCGCATTGTTAATGTGAATTCCATAATGCATCATGTTGGCTTTGTAGACACTGAAGATATGAATCTCACATCTGGAAAAAGGAAATTTTCTAGTATGGTAGGATACTCAAGCAGCAAGTTAGCAGAGATTATGTTTAGTAGTACTATTAATAAACGACTCCCTGCTGAATCTGGCATCAGTGTATTGTGTGTATCACCTGGAATTGTTCAGACCAATGTGGCAAGAGATCTTCCAAAACTTGTTCAAGCTGCGTATCATTTGATCCCTTACTTCATCTTTAGTGCTCAAGAAGGTGCAAGAAGCGCTCTCTTTGCTGCCACTGATCCTCAAGTTCCAGAGTATTGTGAAATGTTGAAAGCAGACGAGTGGCCTGTTTGTGCATTTATTTCTCAAGATTGTCGTCCAGCAAATCCATCGGAAGAAGCGCACAATGTTCAAACATCGTATGAAGTGTGGGAGAAGACATTAGAGATGATTGGCCTTCCCTCAGATGCTGTGGAAAGGCTTTTAGATGGGGAAGAAGTTAAATGCCGTTATGGACAAGAACAGTAA
Predicted protein sequences of Glyma.16g216200
>Glyma.16g216200.11.p sequence-type=predicted peptide transcript=Glyma.16g216200.11 locus=Glyma.16g216200 id=Glyma.16g216200.11.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATTSSSSEEAPNTKKNKKECLGWIEWLRGWFYVVYEMLFQRIMASHLHNPMPLPPVNDLTCIVTGSTSGIGLEIARQLAQSGAHVVMAVRNTKAAQELIQKWQVDSEGLSIPLNVEVMQVDLLSLDSVTRFAEAWNARSAPLHVLINNAGIFSIGEPQKFSKDGYEQHLQVNHLAPALLSILLLPSLIRGSPSRIVNVNSIMHHVGFVDTEDMNLTSGKRKFSSMVGYSSSKLAEIMFSSTINKRLPAESGISVLCVSPGIVQTNVARDLPKLVQAAYHLIPYFIFSAQEGARSALFAATDPQVPEYCEMLKADEWPVCAFISQDCRPANPSEEAHNVQTSYEVWEKTLEMIGLPSDAVERLLDGEEVKCRYGQEQ*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo