SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16g207400

Feature Type:gene_model
Chromosome:Gm16
Start:36938629
stop:36940893
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g207400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G35530.1AT JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
K02985KEGG Ribosome JGI N/AIEA
KOG3181 KOG 40S ribosomal protein S3 JGI N/AIEA
PTHR11760PantherFam 30S/40S RIBOSOMAL PROTEIN S3 JGI N/AIEA
PF00189Pfam Ribosomal protein S3, C-terminal domain JGI N/AIEA
PF07650Pfam KH domain JGI N/AIEA

Gene model name correspondences to Glyma.16g207400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g33240 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g207400
>Glyma.16g207400.1 sequence-type=CDS polypeptide=Glyma.16g207400.1.p locus=Glyma.16g207400 id=Glyma.16g207400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGTCTCAGATGAGCAAGAAGAGAAAGTTTGTTGCGGACGGAGTGTTCTTCGCCGAACTGAACGAGGTTCTGACACGTGAATTGGCGGAGGACGGTTACTCCGGCGTGGAAGTTAGGGTTACGCCGATGCGCACCGAGATCATCATCAGAGCCACCAGAACCCAGGCTGTTCTAGGTGAGAAGGGAAGGAGAATTAGGGAACTTACCTCAGTGGTGCAGAAGAGGTTCAAATTCCCCGAAAACAGTGTCGAGCTTTATGCTGAGAAGGTCAACAACAGAGGCTTGTGTGCCATTGCTCAGGCCGAGTCGCTTCGCTACAAGCTCCTCGGCGGCCTCGCTGTTCGCAGGGCTTGCTATGGTGTTTTAAGATTTGTGATGGAAAGCGGTGCCAAAGGATGCGAGGTCATTGTTAGTGGAAAACTGAGAGCTCAGAGAGCCAAGTCCATGAAATTCAAGGATGGATATATGATTTCTTCTGGACAACCAGTCAAGGATTACATTGACTCTGCAGTGAGACATGTGCTACTAAGACAGGGTGTTCTTGGTATCAAGGTTAAGATCATGCTTGATTGGGATCCTAAAGGGAAACAGGGTCCTAAAACTCCCCTTCCTGATCTTGTCACGATCCACACCCCCAAGGAAGAGGAAGAATATGCCCGGCCTGCTGCTGTTTTGGCAACTGATATTGAGGTCCCTGTTGCTTGA
Predicted protein sequences of Glyma.16g207400
>Glyma.16g207400.1.p sequence-type=predicted peptide transcript=Glyma.16g207400.1 locus=Glyma.16g207400 id=Glyma.16g207400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARPAAVLATDIEVPVA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo