Glyma.16g207100

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Report for Sequence Feature Glyma.16g207100

Feature Type:	gene_model
Chromosome:	Gm16
Start:	36701476
stop:	36704764
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.16g207100

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G20350.2	AT	oxidoreductases	JGI	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	EnsemblGenomes	N/A	IEA
GO:0008198	GO-mf	ferrous iron binding	EnsemblGenomes	N/A	IEA
GO:0016491	GO-mf	oxidoreductase activity	EnsemblGenomes	N/A	IEA
GO:0051213	GO-mf	dioxygenase activity	EnsemblGenomes	N/A	IEA
KOG3200	KOG	Uncharacterized conserved protein	JGI	N/A	IEA
PTHR13069	Panther	UNCHARACTERIZED	JGI	N/A	IEA
PTHR13069:SF2	Panther		JGI	N/A	IEA

Expression Patterns of Glyma.16g207100

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.16g207100 not represented in the dataset	Glyma.16g207100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.16g207100

Paralog	Evidence	Comments
Glyma.09g156400	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.16g207100 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma16g33210	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.16g207100

Limit To All Plant Sequences

>Glyma.16g207100.2 sequence-type=transcript locus=Glyma.16g207100 ID=Glyma.16g207100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GCTATGCATTCTTCGCTTCATCCACCTTCCAAACTCGAACGACCATCTCCTCACCGTCGTGTCTCTCCGCCGCTGCCACCACACCTCCGGCATCCCCAACAGATTTATGGAGCCCCTGCATCAAAGTGGAAGATATTGAAGAATAGAAGGCTACAAAATTGGGGTGGTGTTGTCCATGAGAAGGGCCTTCTACCTCAAATTTTGCCTCCATGGTTAACAAATCTCACGCAAAAAATATATGAAGAATCTGGGCTATTCCCATCAGCACTCAATCATGTTCTTATCAATGAATACCTACCTAACCAAGGCATAATGCCACACCAGGATGGACCTGCCTATTTTCCAGTGGTAGCTATTCTATCACTTGGATCTCCTGTTGTCATGGACTTCACTCCCCATGCAAGATTCAAACAGGATTCCCAAGATGATGTTTGCAAAGATTCAGATGGAGGAACTTTTGAGATTGGGAAAGATAAGTGGCTTGATGATAACCATCCATTCTCCATTTTATTGATGCCTCGCAGCTTACTGATATTCAAGGACAAGGCATACTCAGATTACTTGCATGGTATAAAAGATTGTGCAGTACATTGCTATGATGGGGCTGTAAATGAAGCTGAAGCTTTGAAACACAAGGAATCAGATGGAAACTTGTTTAGCTCAGAGGATGATGAATTGGAAACAATAGGAAAGGGGGAATATAAGAATATATCAAGAAAATCCACTAGAATTTCATTGACTTGTCGATTGGTACCGAAAGTTCACAAAAATTTGTTTAGGTTTTGAAATTATATATTTTGTTCCATCCCCATCCCATCTAAAGTTCAACTGTAACCTCTTCTGTGTTTTTTTCTCTCCTTGGGGGCTTTCTTACATTATCATCTTTAGGCTATGTTTAGATATCTAATGCtgagtggaatgaaatgaattgagatggaatggaatAAAGTTATTATTTTATTGTTTGTAGATTTTTGTTTGATGTAATTAAAAAAAAAAGAACTAGTTCCACCTCATATCCCAGAGAGGGAAAGAAAAGGGAG

Coding sequences of Glyma.16g207100

Limit To All Plant Sequences

>Glyma.16g207100.1 sequence-type=CDS polypeptide=Glyma.16g207100.1.p locus=Glyma.16g207100 ID=Glyma.16g207100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAGAAAAAGTGAAATTGGCTCATTACAAAGTCGGGTCTTTGCCAACTCTATTTTATGTTCCTGACTTCATCACAGACAGTGACCAAAGCCTTCTACTCAACAACATTTATGGAGCCCCTGCATCAAAGTGGAAGATATTGAAGAATAGAAGGCTACAAAATTGGGGTGGTGTTGTCCATGAGAAGGGCCTTCTACCTCAAATTTTGCCTCCATGGTTAACAAATCTCACGCAAAAAATATATGAAGAATCTGGGCTATTCCCATCAGCACTCAATCATGTTCTTATCAATGAATACCTACCTAACCAAGGCATAATGCCACACCAGGATGGACCTGCCTATTTTCCAGTGGTAGCTATTCTATCACTTGGATCTCCTGTTGTCATGGACTTCACTCCCCATGCAAGATTCAAACAGGATTCCCAAGATGATGTTTGCAAAGATTCAGATGGAGGAACTTTTGAGATTGGGAAAGATAAGTGGCTTGATGATAACCATCCATTCTCCATTTTATTGATGCCTCGCAGCTTACTGATATTCAAGGACAAGGCATACTCAGATTACTTGCATGGTATAAAAGATTGTGCAGTACATTGCTATGATGGGGCTGTAAATGAAGCTGAAGCTTTGAAACACAAGGAATCAGATGGAAACTTGTTTAGCTCAGAGGATGATGAATTGGAAACAATAGGAAAGGGGGAATATAAGAATATATCAAGAAAATCCACTAGAATTTCATTGACTTGTCGATTGGTACCGAAAGTTCACAAAAATTTGTTTAGGTTTTGA

>Glyma.16g207100.2 sequence-type=CDS polypeptide=Glyma.16g207100.2.p locus=Glyma.16g207100 ID=Glyma.16g207100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCATTCTTCGCTTCATCCACCTTCCAAACTCGAACGACCATCTCCTCACCGTCGTGTCTCTCCGCCGCTGCCACCACACCTCCGGCATCCCCAACAGATTTATGGAGCCCCTGCATCAAAGTGGAAGATATTGAAGAATAGAAGGCTACAAAATTGGGGTGGTGTTGTCCATGAGAAGGGCCTTCTACCTCAAATTTTGCCTCCATGGTTAACAAATCTCACGCAAAAAATATATGAAGAATCTGGGCTATTCCCATCAGCACTCAATCATGTTCTTATCAATGAATACCTACCTAACCAAGGCATAATGCCACACCAGGATGGACCTGCCTATTTTCCAGTGGTAGCTATTCTATCACTTGGATCTCCTGTTGTCATGGACTTCACTCCCCATGCAAGATTCAAACAGGATTCCCAAGATGATGTTTGCAAAGATTCAGATGGAGGAACTTTTGAGATTGGGAAAGATAAGTGGCTTGATGATAACCATCCATTCTCCATTTTATTGATGCCTCGCAGCTTACTGATATTCAAGGACAAGGCATACTCAGATTACTTGCATGGTATAAAAGATTGTGCAGTACATTGCTATGATGGGGCTGTAAATGAAGCTGAAGCTTTGAAACACAAGGAATCAGATGGAAACTTGTTTAGCTCAGAGGATGATGAATTGGAAACAATAGGAAAGGGGGAATATAAGAATATATCAAGAAAATCCACTAGAATTTCATTGACTTGTCGATTGGTACCGAAAGTTCACAAAAATTTGTTTAGGTTTTGA

Predicted protein sequences of Glyma.16g207100

Limit To All Plant Sequences

>Glyma.16g207100.1.p sequence-type=predicted peptide transcript=Glyma.16g207100.1 locus=Glyma.16g207100 ID=Glyma.16g207100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEEKVKLAHYKVGSLPTLFYVPDFITDSDQSLLLNNIYGAPASKWKILKNRRLQNWGGVVHEKGLLPQILPPWLTNLTQKIYEESGLFPSALNHVLINEYLPNQGIMPHQDGPAYFPVVAILSLGSPVVMDFTPHARFKQDSQDDVCKDSDGGTFEIGKDKWLDDNHPFSILLMPRSLLIFKDKAYSDYLHGIKDCAVHCYDGAVNEAEALKHKESDGNLFSSEDDELETIGKGEYKNISRKSTRISLTCRLVPKVHKNLFRF*

>Glyma.16g207100.2.p sequence-type=predicted peptide transcript=Glyma.16g207100.2 locus=Glyma.16g207100 ID=Glyma.16g207100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MHSSLHPPSKLERPSPHRRVSPPLPPHLRHPQQIYGAPASKWKILKNRRLQNWGGVVHEKGLLPQILPPWLTNLTQKIYEESGLFPSALNHVLINEYLPNQGIMPHQDGPAYFPVVAILSLGSPVVMDFTPHARFKQDSQDDVCKDSDGGTFEIGKDKWLDDNHPFSILLMPRSLLIFKDKAYSDYLHGIKDCAVHCYDGAVNEAEALKHKESDGNLFSSEDDELETIGKGEYKNISRKSTRISLTCRLVPKVHKNLFRF*

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