SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16g199300

Feature Type:gene_model
Chromosome:Gm16
Start:36278229
stop:36284245
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g199300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G25440.1AT ZFWD1 JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
KOG0274 KOG Cdc4 and related F-box and WD-40 proteins JGI N/AIEA
PTHR22844PantherFam F-BOX AND WD40 DOMAIN PROTEIN JGI N/AIEA
PF00400Pfam WD domain, G-beta repeat JGI N/AIEA
PF00642Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) JGI N/AIEA

Gene model name correspondences to Glyma.16g199300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g32370 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g199300
>Glyma.16g199300.1 sequence-type=CDS polypeptide=Glyma.16g199300.1.p locus=Glyma.16g199300 id=Glyma.16g199300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACGTGGACGGTGGCAACAAGCGCGTGTACAACCGCCTCGGTGGGGACGCCAAGCACCAGAAAGTGTGCTTCCACTGGCAAGCGGGCAAGTGCAACCGCTACCCGTGCCCCTTCCTGCACAGCGAATTGCCCGCGAATTCTCACCACGCCAATGGCGCCTCCTCGAAGCGGGCATACGACAATTCGGGCTTCTCGGGCCCGCGCCGCAGCCCCAGTTTCAACAACACGTGGGGCCGTGGCGGGAGCCGTGGTGGCGGTGGTGCCGGTGCCGGTGCCGGTAGAGGGGTGGTGGTGAAGGCGGAGAAAGTCTGTAATTATTGGATTCAGGGGAATTGTAGTTATGGAGAGAGGTGCAAGTTCCTTCACACTTGGAGTGTGGGGGATGGGTTTTCTTTGCTGACCCAGCTTGAAGGGCATCAGAAGGCTGTGAGTGCAATTGCCTTTCCCTCTGGTTCAGATAAGCTGTATACCGGAAGCACTGATGAGACTGCAAGGATTTGGGACTGCCAATCTGGAAAGTGTGTAGGTGTGATCAATCTTGGTGGTGAAGTAGGTTGTATGATCAGTGAAGGCCCTTGGGTCTTTGTTGGGATACCCAATTTTGTCAAGGCCTGGAACACACAAAATTTATCAGAGCTAAGTCTTAATGGTCCTGTTGGACAAGTATATGCACTTGTTGTGAATAATGATATGCTCTTTGCTGGTACACAGGACGGATCTATATTGGCATGGAAGTTTAATGTAGCTACCAACTGCTTTGAGCCGGCTGCATCACTTAAAGGTCATTCTCGGGGTGTTGTTTCATTAGTTGTTGGTGCCAATAGACTTTACTCTGGTTCAATGGACAATACAATAAGAGTATGGAACCTTGAAACCTTGCAGTGTTTACAGACACTAACAGAGCACACATCTGTTGTGATGTCTGTTCTCTGCTGGGACCAATTCCTTTTATCTTGTTCATTGGATAAAACAGTGAAGGTATGGTATGCTACTGAAAGCGGAAACTTGGAAGTGACATATACTCACAACGAAGAAAATGGTATACTTACCCTATGTGGGATGCATGATTCACAAGGCAAACCCATTTTGCTGTGCGCTTGCAATGATAATACTGTGCACCTCTATGATCTGCCATCATTTGCAGAGAGAGGCAAGATATTGACAAAAAAAGAGGTACGAGCAATTCAGATAGGGCCTAACGGCATATTCTTCACTGGTGACGGTACTGGTGAAGTAAGAGTGTGGAATTGGATAGCGGAGGCAACTACTACCACCCAATAA
Predicted protein sequences of Glyma.16g199300
>Glyma.16g199300.1.p sequence-type=predicted peptide transcript=Glyma.16g199300.1 locus=Glyma.16g199300 id=Glyma.16g199300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDVDGGNKRVYNRLGGDAKHQKVCFHWQAGKCNRYPCPFLHSELPANSHHANGASSKRAYDNSGFSGPRRSPSFNNTWGRGGSRGGGGAGAGAGRGVVVKAEKVCNYWIQGNCSYGERCKFLHTWSVGDGFSLLTQLEGHQKAVSAIAFPSGSDKLYTGSTDETARIWDCQSGKCVGVINLGGEVGCMISEGPWVFVGIPNFVKAWNTQNLSELSLNGPVGQVYALVVNNDMLFAGTQDGSILAWKFNVATNCFEPAASLKGHSRGVVSLVVGANRLYSGSMDNTIRVWNLETLQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWYATESGNLEVTYTHNEENGILTLCGMHDSQGKPILLCACNDNTVHLYDLPSFAERGKILTKKEVRAIQIGPNGIFFTGDGTGEVRVWNWIAEATTTTQ*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo