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Report for Sequence Feature Glyma.16g195800

Feature Type:gene_model
Chromosome:Gm16
Start:35731452
stop:35734184
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.16g195800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G48310.1AT cytochrome P450, family 71, subfamily A, polypeptide 22 JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process JGI N/AIEA
GO:0005506GO-mf iron ion binding EnsemblGenomesN/AIEA
GO:0005506GO-mf iron ion binding JGI N/AIEA
GO:0009055GO-mf electron carrier activity JGI N/AIEA
GO:0016705GO-mf oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen EnsemblGenomesN/AIEA
GO:0016705GO-mf oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen JGI N/AIEA
GO:0020037GO-mf heme binding EnsemblGenomesN/AIEA
GO:0020037GO-mf heme binding JGI N/AIEA
PTHR24298Panther FAMILY NOT NAMED JGI N/AIEA
PTHR24298:SF44Panther JGI N/AIEA
PF00067PFAM Cytochrome P450 JGI N/AIEA
PWY-5365SoyCyc9 linear furanocoumarin biosynthesis Plant Metabolic Network ISS
GN7V-52775SoyCyc9-rxn psoralen synthase Plant Metabolic Network ISS

Expression Patterns of Glyma.16g195800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.16g195800 not represented in the dataset
Glyma.16g195800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.16g195800 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g32034 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g195800
>Glyma.16g195800.1 sequence-type=CDS polypeptide=Glyma.16g195800.1.p locus=Glyma.16g195800 ID=Glyma.16g195800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCATGTTTTTATGATGCTGTTGAGGAGCATGTTGGTAAGAAATGCCATGATGGGCATGTTGATGTTGATGATGGTGAAGACCAGAATGATTTTGTGGACATTTTGCTTTCGATTCAAGAGACTAACACCACAGATTTCCAGATTGATAGAACATTCGTCAAGACTTTGGTCATGGACATAGTTAATGCTTGGGCAATTTCAACTGACCCTTCATATTGGGACCAACCTCTAGAGTTTCAACCAGGGAGATTCTTGAAGAGTTCATTGGATATCAAAGGACATGATTTCGAATTGATCCGATTTGGAGCTAGAAGAAGGGGTTGTCCAGGAATAGGCTTTGCCATGGCTTTGAATGAGGTAGTCCTTGCAAACATTGTGCACCAGTTTTATTGGGCAGTGCCTGAAAAGTTTGGGCATTGTTATTTTCTCGTGATTAGCACCTCGAAGAAGTGGATGAGCTCAACGACAATGAGGTTCTCTTTTGAGCGCAACTACGAGGTTCCCTTCGAGTGCAAACACAATGGTAACATCCAGGTTACCTACGACTACGAGTGCAAAGGCAAAATGTCTCGTTGCCGATGCGAGAAGATAGTGAACTCTTGGTGTTTGGTTACTAAGAAACGGATAAAAATATAG
Predicted protein sequences of Glyma.16g195800
>Glyma.16g195800.1.p sequence-type=predicted peptide transcript=Glyma.16g195800.1 locus=Glyma.16g195800 ID=Glyma.16g195800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MACFYDAVEEHVGKKCHDGHVDVDDGEDQNDFVDILLSIQETNTTDFQIDRTFVKTLVMDIVNAWAISTDPSYWDQPLEFQPGRFLKSSLDIKGHDFELIRFGARRRGCPGIGFAMALNEVVLANIVHQFYWAVPEKFGHCYFLVISTSKKWMSSTTMRFSFERNYEVPFECKHNGNIQVTYDYECKGKMSRCRCEKIVNSWCLVTKKRIKI*






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