Report for Sequence Feature Glyma.16g181400
| Feature Type: | gene_model |
| Chromosome: | Gm16 |
| Start: | 34452447 |
| stop: | 34458837 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
| 
|
Annotations for Glyma.16g181400
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT4G23420.3 | AT |
|
JGI | N/A | IEA |
| 1.1.1.330 | EC |
very-long-chain 3-oxoacyl-CoA reductase |
JGI | N/A | IEA |
| GO:0008152 | GO-bp |
metabolic process |
JGI | N/A | IEA |
| GO:0016491 | GO-mf |
oxidoreductase activity |
JGI | N/A | IEA |
| KOG1208 |
KOG |
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
JGI | N/A | IEA |
| PTHR24320 | PantherFam |
RETINOL DEHYDROGENASE |
JGI | N/A | IEA |
| PF00106 | Pfam |
short chain dehydrogenase |
JGI | N/A | IEA |
Gene model name correspondences to Glyma.16g181400 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma16g30070 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.16g181400
>Glyma.16g181400.1 sequence-type=CDS polypeptide=Glyma.16g181400.1.p locus=Glyma.16g181400 id=Glyma.16g181400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTTCTTCTGGGTTTTCATCATCTTCCACTGCAGAGGAAGTTACTCAAGGAATCGATGGGAGTGGCCTCACTGCAATTGTCACAGGAACAACCCATGGTATTGGCACTGAGACGGCAAGAGTTCTTGTTTTGCGTGGTGTACATGTGATTATGGCAGCCAGAGATGTGATTGCAGCAAAAACTATCAAAGAGGTAATACTTGAAGAGATTCCCACAGCCAAAGTTGATGCCATGGAGTTAGATCTTAGCTCAATGGCATCCGTTAGGAAGTTTGCATCGGAGTTCATTTCATTTGGTCTTCCATTGAACATCTTGATAAACAATGCAGGAATAAGCGCATTCCCTTTCACGCTGTCCAAAGACAACATCGAACTACTATTTGCTACAAATCACTTAGGTCATTTTTTTTTAACAAATCTTTTGTTGGATACTATGAAGAAAACTGCAAGTGAAAGCAAGAAAGAAGGAAGAATTATTAATGTTTCCTCTGATGGTCACCAATATACATATCCTGAAGGAATCCTTTTTGATAAAATTAATGACGAATCAAGTTACCAGAAGTGGCGTGCATATGGGCAATCAAAGCTTGCTAACATTTTACATGCCAACGAACTTGCAAGACTTCTTAAAGAAGATGGGATAGATATTACTGCAAATTCTCTTCATCCAGGAGCTATTATCACCAATATTTATAAACCAGAGCTTAGTGGCCCAGTGCCAACTGATCTAATGAATATGCTTGGAGATTATCTGCTTAAAAGTATCCCGCAGGGAGCAGCAACAACATGCTATGTAGCATTGCACCCACAAGTGAAGGGGATTAGTGGCGAGTATTTTTCAGATAGTAATCTGGCTAAAGCAAGCTCACTGGCAACAGACACTGATTTGGCTAAGAAACTTTGGGATTTCAGCATGAAAATAATTGACTACAATGCCCATGATTCATGA
>Glyma.16g181400.2 sequence-type=CDS polypeptide=Glyma.16g181400.2.p locus=Glyma.16g181400 id=Glyma.16g181400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTTCTTCTGGGTTTTCATCATCTTCCACTGCAGAGGAAGTTACTCAAGGAATCGATGGGAGTGGCCTCACTGCAATTGTCACAGGAACAACCCATGGTATTGGCACTGAGACGGCAAGAGTTCTTGTTTTGCGTGGTGTACATGTGATTATGGCAGCCAGAGATGTGATTGCAGCAAAAACTATCAAAGAGGTAATACTTGAAGAGATTCCCACAGCCAAAGTTGATGCCATGGAGTTAGATCTTAGCTCAATGGCATCCGTTAGGAAGTTTGCATCGGAGTTCATTTCATTTGGTCTTCCATTGAACATCTTGATTTACCAGAAGTGGCGTGCATATGGGCAATCAAAGCTTGCTAACATTTTACATGCCAACGAACTTGCAAGACTTCTTAAAGAAGATGGGATAGATATTACTGCAAATTCTCTTCATCCAGGAGCTATTATCACCAATATTTATAAACCAGAGCTTAGTGGCCCAGTGCCAACTGATCTAATGAATATGCTTGGAGATTATCTGCTTAAAAGTATCCCGCAGGGAGCAGCAACAACATGCTATGTAGCATTGCACCCACAAGTGAAGGGGATTAGTGGCGAGTATTTTTCAGATAGTAATCTGGCTAAAGCAAGCTCACTGGCAACAGACACTGATTTGGCTAAGAAACTTTGGGATTTCAGCATGAAAATAATTGACTACAATGCCCATGATTCATGA
Predicted protein sequences of Glyma.16g181400
>Glyma.16g181400.1.p sequence-type=predicted peptide transcript=Glyma.16g181400.1 locus=Glyma.16g181400 id=Glyma.16g181400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGSSGFSSSSTAEEVTQGIDGSGLTAIVTGTTHGIGTETARVLVLRGVHVIMAARDVIAAKTIKEVILEEIPTAKVDAMELDLSSMASVRKFASEFISFGLPLNILINNAGISAFPFTLSKDNIELLFATNHLGHFFLTNLLLDTMKKTASESKKEGRIINVSSDGHQYTYPEGILFDKINDESSYQKWRAYGQSKLANILHANELARLLKEDGIDITANSLHPGAIITNIYKPELSGPVPTDLMNMLGDYLLKSIPQGAATTCYVALHPQVKGISGEYFSDSNLAKASSLATDTDLAKKLWDFSMKIIDYNAHDS*
>Glyma.16g181400.2.p sequence-type=predicted peptide transcript=Glyma.16g181400.2 locus=Glyma.16g181400 id=Glyma.16g181400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGSSGFSSSSTAEEVTQGIDGSGLTAIVTGTTHGIGTETARVLVLRGVHVIMAARDVIAAKTIKEVILEEIPTAKVDAMELDLSSMASVRKFASEFISFGLPLNILIYQKWRAYGQSKLANILHANELARLLKEDGIDITANSLHPGAIITNIYKPELSGPVPTDLMNMLGDYLLKSIPQGAATTCYVALHPQVKGISGEYFSDSNLAKASSLATDTDLAKKLWDFSMKIIDYNAHDS*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
