SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16g180800

Feature Type:gene_model
Chromosome:Gm16
Start:34381095
stop:34388974
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g180800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G02260.1AT JGI N/AIEA
GO:0055085GO-bp transmembrane transport JGI N/AIEA
GO:0016021GO-cc integral component of membrane JGI N/AIEA
KOG2639 KOG Sodium sulfate symporter and related arsenite permeases JGI N/AIEA
PTHR10283PantherFam SOLUTE CARRIER FAMILY 13 MEMBER JGI N/AIEA
PF03600Pfam Citrate transporter JGI N/AIEA

Gene model name correspondences to Glyma.16g180800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g30000 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g180800
>Glyma.16g180800.1 sequence-type=CDS polypeptide=Glyma.16g180800.1.p locus=Glyma.16g180800 id=Glyma.16g180800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTTAGCTCCTACTTCAAAAGTTGTCCTTGGTTCAATAGCCTTTGCTATCTTCTGGGTACTAGCAGTTTTCCCAGCTGTGCCTTTTCTACCCATTGGGAGAACTGCAGGGTCCCTGCTTGGTGCCATGCTTATGGTCATATTCAAAGTTCTTAGTCCAGATCAAGCTTATGCTGCAATTGATCTCCCAATTCTTGGTCTTCTTTTTGGGACTATGGCTGTCACTATTTTTCTTGAAAGAGCAAACATGTTCAAGTACTTGGGGAAATTGCTCTCTTGGAAAAGTAGAGGACCAAAGGACTTACTTTGTAGAATCTGTCTCATTTCTGCTATCTCAAGTGCTTTTTTCACCAATGACACTTCTTGCATTGTGTTGACTGAATTTGTGTTGAAAATTGCAAGGCAACATAACCTCCCACCTTACCCTTTCCTTCTTGCACTTGCTACAAGTGCTAATATTGGATCCTCAGCAACCCCAATTGGGAACCCCCAGAATTTGGTTATAGCTATTCAAGGTAAAATATCATTTGGGAGGTTTCTGATAGGTATTCTTCCAGCTATGCTTGTAGGAGTTGTGGTGAATGTTGTATTTCTTATAGCCATGTATTGGAAGGTACTATCTTGTCCTAAGGATGAAGAGGATCCAGTTTCAGAAGTTGTAGTGGATGAGGAGGTTGTTTCTCATCAGTTTTCTCCAGCCAGAATGTCTCATTTTACATCCTTTAATTCTCAAGAATGCAATGGCAGTGTAGAACTTGCTAATAGTATTCAAAACTCTTCCCAAGTTCATGTTATGAGAGACCAATCAACTCCAAGTGAAAGTGAAGTTCAGATGGTTCATAGTGGCACAAAGGATTTCACAACAAACTCAAATGCATCCAAGGAAGGGACAAATGATACAAAGGAGGAAACTAATCCTTCAAAAAATGTTGCAATAGTAGTGGATAAACCTATTGAAGCACTTGTTATACTCTCTTCAGGAGAAAAGGACTATATGAACAAAAAATGGAAGAGGGTACTGTGGAAATCTTGTGTTTATGCAATCACACTAGTAATGTTGATTGCAATGCTCATTGGTTTGAATATGGCATGGACTGCAATTGCAGCTGCAATAACTTTGGTGGTTCTTGATTTCAAAGATGCAGGGCCAAGCTTAGACAAGGTCTCATATTCACTTTTGGTATTCTTCTGTGGAATGTTTATCACAGTAGAGGGCTTTAAGTCCACTGGAATTCCTAGTGCTATGTGGGACTTAATGGAGCCCTATTCTCGAATAGATCATGCTAGTGAAACAGCTATACTTGCTATAGTTATACTTGTCCTATCAAATTTGGCTTCAAACGTACCAACAGTTCTATTGCTTGGAGCAAGAGTTGCAGCCTCAGCTGCTGCAATTTCCAAAGGAGATGAGGAGAGGGCATGGCTAATCTTAGCTTGGGTTAGCACTATAGCAGGGAACTTTTCACTATTAGGATCAGCTGCCAACTTGATAGTGTGTGAACAAGCTCGTCGAGCTCCAAACCTTGGATACACATTAACCTTTTGGACTCATCTAAAAGTTGGCCTTCCTTCAACTCTTATAGTCACTGCTATTGGGTTGACACTCATAAAATGA

>Glyma.16g180800.2 sequence-type=CDS polypeptide=Glyma.16g180800.2.p locus=Glyma.16g180800 id=Glyma.16g180800.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTTAGCTCCTACTTCAAAAGTTGTCCTTGGTTCAATAGCCTTTGCTATCTTCTGGGTACTAGCAGTTTTCCCAGCTGTGCCTTTTCTACCCATTGGGAGAACTGCAGGGTCCCTGCTTGGTGCCATGCTTATGGTCATATTCAAAGTTCTTAGTCCAGATCAAGCTTATGCTGCAATTGATCTCCCAATTCTTGGTCTTCTTTTTGGGACTATGGCTGTCACTATTTTTCTTGAAAGAGCAAACATGTTCAAGTACTTGGGGAAATTGCTCTCTTGGAAAAGTAGAGGACCAAAGGACTTACTTTGTAGAATCTGTCTCATTTCTGCTATCTCAAGTGCTTTTTTCACCAATGACACTTCTTGCATTGTGTTGACTGAATTTGTGTTGAAAATTGCAAGGCAACATAACCTCCCACCTTACCCTTTCCTTCTTGCACTTGCTACAAGTGCTAATATTGGATCCTCAGCAACCCCAATTGGGAACCCCCAGAATTTGGTTATAGCTATTCAAGGTAAAATATCATTTGGGAGGTTTCTGATAGGTATTCTTCCAGCTATGCTTGTAGGAGTTGTGGTGAATGTTGTATTTCTTATAGCCATGTATTGGAAGGTACTATCTTGTCCTAAGGATGAAGAGGATCCAGTTTCAGAAGTTGTAGTGGATGAGGAGGTTGTTTCTCATCAGTTTTCTCCAGCCAGAATGTCTCATTTTACATCCTTTAATTCTCAAGAATGCAATGGCAGTGTAGAACTTGCTAATAGTATTCAAAACTCTTCCCAAGTTCATGTTATGAGAGACCAATCAACTCCAAGTGAAAGTGAAGTTCAGATGGTTCATAGTGGCACAAAGGATTTCACAACAAACTCAAATGCATCCAAGGAAGGGACAAATGATACAAAGGAGGAAACTAATCCTTCAAAAAATGTTGCAATAGTAGTGGATAAACCTATTGAAGCACTTGTTATACTCTCTTCAGGAGAAAAGGACTATATGAACAAAAAATGGAAGAGGGTACTGTGGAAATCTTGTGTTTATGCAATCACACTAGTAATGTTGATTGCAATGCTCATTGGTTTGAATATGGCATGGACTGCAATTGCAGCTGCAATAACTTTGGTGGTTCTTGATTTCAAAGATGCAGGGCCAAGCTTAGACAAGGTCTCATATTCACTTTTGGTATTCTTCTGTGGAATGTTTATCACAGTAGAGGGCTTTAAGTCCACTGGAATTCCTAGTGCTATGTGGGACTTAATGGAGCCCTATTCTCGAATAGATCATGCTAGTGAAACAGCTATACTTGCTATAGTTATACTTGTCCTATCAAATTTGGCTTCAAACGTACCAACAGTTCTATTGCTTGGAGCAAGAGTTGCAGCCTCAGCTGCTGCAATTTCCAAAGGAGATGAGGAGAGGGCATGGCTAATCTTAGCTTGGGTTAGCACTATAGCAGGGAACTTTTCACTATTAGGATCAGCTGCCAACTTGATAGTGTGTGAACAAGCTCGTCGAGCTCCAAACCTTGGATACACATTAACCTTTTGGACTCATCTAAAAGTTGGCCTTCCTTCAACTCTTATAGTCACTGCTATTGGGTTGACACTCATAAAATGA
Predicted protein sequences of Glyma.16g180800
>Glyma.16g180800.1.p sequence-type=predicted peptide transcript=Glyma.16g180800.1 locus=Glyma.16g180800 id=Glyma.16g180800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MALAPTSKVVLGSIAFAIFWVLAVFPAVPFLPIGRTAGSLLGAMLMVIFKVLSPDQAYAAIDLPILGLLFGTMAVTIFLERANMFKYLGKLLSWKSRGPKDLLCRICLISAISSAFFTNDTSCIVLTEFVLKIARQHNLPPYPFLLALATSANIGSSATPIGNPQNLVIAIQGKISFGRFLIGILPAMLVGVVVNVVFLIAMYWKVLSCPKDEEDPVSEVVVDEEVVSHQFSPARMSHFTSFNSQECNGSVELANSIQNSSQVHVMRDQSTPSESEVQMVHSGTKDFTTNSNASKEGTNDTKEETNPSKNVAIVVDKPIEALVILSSGEKDYMNKKWKRVLWKSCVYAITLVMLIAMLIGLNMAWTAIAAAITLVVLDFKDAGPSLDKVSYSLLVFFCGMFITVEGFKSTGIPSAMWDLMEPYSRIDHASETAILAIVILVLSNLASNVPTVLLLGARVAASAAAISKGDEERAWLILAWVSTIAGNFSLLGSAANLIVCEQARRAPNLGYTLTFWTHLKVGLPSTLIVTAIGLTLIK*

>Glyma.16g180800.2.p sequence-type=predicted peptide transcript=Glyma.16g180800.2 locus=Glyma.16g180800 id=Glyma.16g180800.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MALAPTSKVVLGSIAFAIFWVLAVFPAVPFLPIGRTAGSLLGAMLMVIFKVLSPDQAYAAIDLPILGLLFGTMAVTIFLERANMFKYLGKLLSWKSRGPKDLLCRICLISAISSAFFTNDTSCIVLTEFVLKIARQHNLPPYPFLLALATSANIGSSATPIGNPQNLVIAIQGKISFGRFLIGILPAMLVGVVVNVVFLIAMYWKVLSCPKDEEDPVSEVVVDEEVVSHQFSPARMSHFTSFNSQECNGSVELANSIQNSSQVHVMRDQSTPSESEVQMVHSGTKDFTTNSNASKEGTNDTKEETNPSKNVAIVVDKPIEALVILSSGEKDYMNKKWKRVLWKSCVYAITLVMLIAMLIGLNMAWTAIAAAITLVVLDFKDAGPSLDKVSYSLLVFFCGMFITVEGFKSTGIPSAMWDLMEPYSRIDHASETAILAIVILVLSNLASNVPTVLLLGARVAASAAAISKGDEERAWLILAWVSTIAGNFSLLGSAANLIVCEQARRAPNLGYTLTFWTHLKVGLPSTLIVTAIGLTLIK*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo