SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16g173000

Feature Type:gene_model
Chromosome:Gm16
Start:33538455
stop:33540086
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g173000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G24090.1AT ATCHIA,CHIA JGI N/AIEA
3.2.1.14EC chitinase JGI N/AIEA
GO:0005975GO-bp carbohydrate metabolic process JGI N/AIEA
GO:0004553GO-mf hydrolase activity, hydrolyzing O-glycosyl compounds JGI N/AIEA
K01183KEGG Amino sugar and nucleotide sugar metabolism JGI N/AIEA
PTHR11177PantherFam CHITINASE JGI N/AIEA
PF00704Pfam Glycosyl hydrolases family 18 JGI N/AIEA

Gene model name correspondences to Glyma.16g173000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g28970 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g173000
>Glyma.16g173000.1 sequence-type=CDS polypeptide=Glyma.16g173000.1.p locus=Glyma.16g173000 id=Glyma.16g173000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAAAACCCTTAACAAAGCCTCACTTATTTTATTCCCTCTCTTGTTCCTTTCCCTATTCAAGCATTCCCATGCTGCAGGAATCGCTATCTACTGGGGCCAAAACGGTGGAGAAGGCACCTTAGCAGAAGCTTGCAACACTAGAAACTACCAATATGTGAACATAGCCTTCTTGTCCACTTTTGGCAACGGCCAAACTCCACAACTCAACCTTGCAGGTCATTGTGACCCCAACAACAATGGCTGCACTGGGTTGAGCAGTGACATCAAAACTTGCCAAGACCTTGGCATCAAAGTGTTGCTCTCCCTTGGTGGTGGTGCTGGAAGCTACTCCCTCAGCTCAGCTGATGATGCCACTCAACTTGCAAACTACCTCTGGCAGAATTTCCTTGGAGGTCAAACCGGATCAGGGCCATTAGGTAATGTTATATTGGATGGCATTGACTTTGACATTGAATCTGGTGGGAGTGACCATTATGATGACCTAGCCAGGGCATTAAATAGCTTCAGCTCACAAAGGAAGGTGTACTTGTCTGCAGCCCCACAGTGCATAATCCCTGATGCTCACTTGGATAGAGCCATCCAAACTGGGCTTTTTGACTATGTGTGGGTTCAATTCTACAACAACCCTTCATGCCAATACTCCAGTGGAAACACCAACAATTTGATCAATTCATGGAACCAATGGATCACAGTGCCAGCTTCTCAAATCTTCATGGGGCTTCCTGCATCTGAGGCAGCTGCTCCAAGTGGTGGCTTTGTGCCCGCTGATGTGTTGACTTCTCAGGTTCTTCCTGTGATTAAACAGTCTTCAAAGTATGGTGGAGTCATGCTCTGGAACAGATTCAATGATGTCCAAAATGGTTATAGTAATGCTATTATTGGAAGTGTTTAA
Predicted protein sequences of Glyma.16g173000
>Glyma.16g173000.1.p sequence-type=predicted peptide transcript=Glyma.16g173000.1 locus=Glyma.16g173000 id=Glyma.16g173000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MKTLNKASLILFPLLFLSLFKHSHAAGIAIYWGQNGGEGTLAEACNTRNYQYVNIAFLSTFGNGQTPQLNLAGHCDPNNNGCTGLSSDIKTCQDLGIKVLLSLGGGAGSYSLSSADDATQLANYLWQNFLGGQTGSGPLGNVILDGIDFDIESGGSDHYDDLARALNSFSSQRKVYLSAAPQCIIPDAHLDRAIQTGLFDYVWVQFYNNPSCQYSSGNTNNLINSWNQWITVPASQIFMGLPASEAAAPSGGFVPADVLTSQVLPVIKQSSKYGGVMLWNRFNDVQNGYSNAIIGSV*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo