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Report for Sequence Feature Glyma.16g170200

Feature Type:gene_model
Chromosome:Gm16
Start:33219352
stop:33224079
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g170200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G21320.2AT JGI N/AIEA
GO:0000398GO-bp mRNA splicing, via spliceosome JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0017069GO-mf snRNA binding JGI N/AIEA
PTHR10501PantherFam U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B JGI N/AIEA
PTHR10501:SF20PantherFam SMOOTH, ISOFORM T JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA

Gene model name correspondences to Glyma.16g170200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g28620 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g170200
>Glyma.16g170200.1 sequence-type=CDS polypeptide=Glyma.16g170200.1.p locus=Glyma.16g170200 id=Glyma.16g170200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGGACGGCTACTGGAACCGGCAACAGGCGTTTCTGCCTCACTCCGGCATGCTCAAACGGCCGCGTTCCGACTACGGTAATGAGATGCATAATCATGTTGCTCGTGATGATGACCGTACTGGTCACCGAATGCTAAAGGACACACAAACAATTGGATCTGCTTATGACCACTACCTTCAGAGTGGGCAACTTTCTTCATTTACTTCTGGGGAAGTCAGTGCAGTTGGTGGTCTTGGGTTGGCTAGGGGTGGTGGTGGTGGATTATCAGGCCATTCACTAGCTGATCCTGCTGTCATGGGGCGTCATGGGGGTGGTGGTTCAGATCTAGCGCCAAATGGACGGGGTGTTAATTATGGTGGTCAGCTACCAGTAGATGCGGTTTCCAGACCTGGACCTGAGACAGGATCTCTACCTCCAGATGCTTCAAGTACTTTATATGTTGAAGGTCTCCCTTCTGATAGCACCAGAAGGGAAGTAGCTCATATTTTCCGCCCTTTTGTTGGGTATAGAGAAGTTAGACTTGTGAGCAAAGAATCGAAACATCGTGGTGGAGATCCTCATTACCTTTGTTTTGTGGACTTTGCAAATCCAGCTTGTGCAGCAACCGCTATGAGTGCCTTGCAAGGTTATAAAGTTGATGAACTCAATCCCGAGTCCAGTCACTTGCGGCTTCAGTTTTCTCGGTATCCTGGTCCAAGAAGTGGACCTGCTTTTCGCAGTAAAAGATGA

>Glyma.16g170200.2 sequence-type=CDS polypeptide=Glyma.16g170200.2.p locus=Glyma.16g170200 id=Glyma.16g170200.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCATAATCATGTTGCTCGTGATGATGACCGTACTGGTCACCGAATGCTAAAGGACACACAAACAATTGGATCTGCTTATGACCACTACCTTCAGAGTGGGCAACTTTCTTCATTTACTTCTGGGGAAGTCAGTGCAGTTGGTGGTCTTGGGTTGGCTAGGGGTGGTGGTGGTGGATTATCAGGCCATTCACTAGCTGATCCTGCTGTCATGGGGCGTCATGGGGGTGGTGGTTCAGATCTAGCGCCAAATGGACGGGGTGTTAATTATGGTGGTCAGCTACCAGTAGATGCGGTTTCCAGACCTGGACCTGAGACAGGATCTCTACCTCCAGATGCTTCAAGTACTTTATATGTTGAAGGTCTCCCTTCTGATAGCACCAGAAGGGAAGTAGCTCATATTTTCCGCCCTTTTGTTGGGTATAGAGAAGTTAGACTTGTGAGCAAAGAATCGAAACATCGTGGTGGAGATCCTCATTACCTTTGTTTTGTGGACTTTGCAAATCCAGCTTGTGCAGCAACCGCTATGAGTGCCTTGCAAGGTTATAAAGTTGATGAACTCAATCCCGAGTCCAGTCACTTGCGGCTTCAGTTTTCTCGGTATCCTGGTCCAAGAAGTGGACCTGCTTTTCGCAGTAAAAGATGA
Predicted protein sequences of Glyma.16g170200
>Glyma.16g170200.1.p sequence-type=predicted peptide transcript=Glyma.16g170200.1 locus=Glyma.16g170200 id=Glyma.16g170200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MADGYWNRQQAFLPHSGMLKRPRSDYGNEMHNHVARDDDRTGHRMLKDTQTIGSAYDHYLQSGQLSSFTSGEVSAVGGLGLARGGGGGLSGHSLADPAVMGRHGGGGSDLAPNGRGVNYGGQLPVDAVSRPGPETGSLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYREVRLVSKESKHRGGDPHYLCFVDFANPACAATAMSALQGYKVDELNPESSHLRLQFSRYPGPRSGPAFRSKR*

>Glyma.16g170200.2.p sequence-type=predicted peptide transcript=Glyma.16g170200.2 locus=Glyma.16g170200 id=Glyma.16g170200.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MHNHVARDDDRTGHRMLKDTQTIGSAYDHYLQSGQLSSFTSGEVSAVGGLGLARGGGGGLSGHSLADPAVMGRHGGGGSDLAPNGRGVNYGGQLPVDAVSRPGPETGSLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYREVRLVSKESKHRGGDPHYLCFVDFANPACAATAMSALQGYKVDELNPESSHLRLQFSRYPGPRSGPAFRSKR*






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