Glyma.16g166500

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Report for Sequence Feature Glyma.16g166500

Feature Type:	gene_model
Chromosome:	Gm16
Start:	32581779
stop:	32585968
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.16g166500

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G43245.1	AT	SET domain-containing protein	JGI	N/A	IEA
GO:0005515	GO-mf	protein binding	EnsemblGenomes	N/A	IEA
GO:0005515	GO-mf	protein binding	JGI	N/A	IEA
KOG2084	KOG	Predicted histone tail methylase containing SET domain	JGI	N/A	IEA
PTHR12197	Panther	SET AND MYND DOMAIN CONTAINING	JGI	N/A	IEA
PTHR12197:SF90	Panther	SET AND MYND DOMAIN-CONTAINING PROTEIN DDB_G0277331	JGI	N/A	IEA
PF00856	PFAM	SET domain	JGI	N/A	IEA

Expression Patterns of Glyma.16g166500

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.16g166500 not represented in the dataset	Glyma.16g166500 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.16g166500 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma16g28140	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.16g166500

Limit To All Plant Sequences

>Glyma.16g166500.2 sequence-type=transcript locus=Glyma.16g166500 ID=Glyma.16g166500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AGGCTGGGTGGGATATGGAGATGAGAAGCAAGGAAGAGATAGAAATAGGAAGAGACATAACAGCAACACTGACTCCTCTCTCTTTTTGTCTCCACACTTTCTATCTTCACACTCACTGCTCTGCTTGCTTCTCTTCCCTTccaattcccaatcccaatcccaatcccaatTCACTCTTCTATTGCTCCCCTCCATGCTCCGCCGCACTTTCACCTCTCCACCACTCCTCCGCCGAGCGCCACCTACCTCCCTCCGCTCACTCCTCCCACCTCTGTACCGCCCTCCGCCTCCTCCTCTCCCACCGCCCCACCTCCTCCTCCCGCCTCGCCGGCCTCCTCTCCAATCGCCACATCCTCACCTCCCTCTCTGTCCACGACGACGTTTCGGAGAGAATCAGCGTCGGTGCCGGCGCCATGGCAGAAGCGATCGCGAAGCAGCGCGGCATCCCCAACGACGACGCCGTTTTGGAGGAAGCCACGATTGCGCTCAGCGCGGTGCTAACGAACGCCGTGGAGGTGCACGATAACGAAGGGCGCGCCCTCGGAATCGCGGTTTTCGACCAAATCTTCTCTTGGATCAACCACAGTTGTTCCCCCAACGCCTGCTACCGCTTTGTCCTCTCTTCTTCTTCGCATTCCGGGGAAGCCAAACTTGGAATTGCTCCACACCTACAAGCAATGAGACAGTCAGAGCTATGGTCAAAGTATAGGTTCGTTTGTTGTTGCAAACGATGTAGTGCTCTGCCCTCTTCCTACGTGGATCATGCGTTGCAAGAAATTTCTGCTATCACTTGTGAATCATCTGGTTCATGTTCCAAGTTCCTCAAAGACATGGCTGATAGAAGATTGACTGAGTGCATTGATGATGTTATATTGGAGTATCTTTCTGTTGGTGATCCTGAGTCTTGTTGTGAGAAGCTTGAGGAGATACTCACACAAGGTCTAAAAGAGCACTTAGAAGTCATTGAAGTAAAACCAGATTGTATATTCATGCTGCATCCCCTACATCACCACTCTATAAAAGCATACACAACACTGGCTTCTGCATATAAAGTTTGTGCTTGTGATTTATTGTCTGTAGACTCTGAAACAGATATAAACCAATTAAAAGCTTTTGACATGAGCAGGATCAGTGCTGCGTATTCTTTGGTACTTGCAGGAGCAACTCATCATCTCTTCAATTCTGAATCCTCACTGATTGCATCTGTTGCAAATTTTTGGACAGGAGCTGGTGAATCTTTGTTATCTCTAAGCAAAAGTTCTGGATGGAGTATGTGTGTTAATTTGGGTCTTGTTATTCCAAACCTTGCTTCTGCCATGAAATTCAAATGTACAAAGTGCTCCTTAATGGATAGGTTTAGAGCTGGTATGTTAAATGGTCAAATTAAAAGTGCAGATTTTGAGAATGTATCAAATGAATTTCTTCATTGTGTCTCAGATATTACTCAGAAAGTTTGGGGTTTCCTTATCTCTGATTGCCAATTTTTGCAATCATGCAAAGATCCTATCATTTCCAGCTGGCTAATGTCTACCAAAAGTTCAAGTACAGTGGATGTTGAGGTTTGCGTTAACAAAACTAACATGTGTTACACCAATGAATCTGAAAATAGCGTCTCTATGTGTCATGAACAAACCTTAGCAGATCATGCAGTAGCATGCATTTTTCAGCTTGGCGTACACTGCTTAGCATATGGAGGATTATTGGCTAGCATTTGTTATGGCCCCCATTCACATTTGGTTTGTCATGTTCAAAATGTTCTAGAACATGAAAAGAATTTTGTATTATATTCTCATTAAGGGTCTTGAAAGATCATGTATGACACCTTGTGAAAGATCCGATATATAAACATGAATGTTGAATTTTTTTTATTCTTTTAGCTTGATACCTTGTGATGATAAATGCTGAAGAGATAGACGTACGACTCAGTTACAGCATCATAGGTAGTAAAATGAAGTGTATAAGGAACATTAGATTAGATGATTGACATGATACTGACAATTTGTT

Coding sequences of Glyma.16g166500

Limit To All Plant Sequences

>Glyma.16g166500.1 sequence-type=CDS polypeptide=Glyma.16g166500.1.p locus=Glyma.16g166500 ID=Glyma.16g166500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGATGAGAAGCAAGGAAGAGATAGAAATAGGAAGAGACATAACAGCAACACTGACTCCTCTCTCTTTTTGTCTCCACACTTTCTATCTTCACACTCACTGCTCTGCTTGCTTCTCTTCCCTTCCAATTCCCAATCCCAATCCCAATCCCAATTCACTCTTCTATTGCTCCCCTCCATGCTCCGCCGCACTTTCACCTCTCCACCACTCCTCCGCCGAGCGCCACCTACCTCCCTCCGCTCACTCCTCCCACCTCTGTACCGCCCTCCGCCTCCTCCTCTCCCACCGCCCCACCTCCTCCTCCCGCCTCGCCGGCCTCCTCTCCAATCGCCACATCCTCACCTCCCTCTCTGTCCACGACGACGTTTCGGAGAGAATCAGCGTCGGTGCCGGCGCCATGGCAGAAGCGATCGCGAAGCAGCGCGGCATCCCCAACGACGACGCCGTTTTGGAGGAAGCCACGATTGCGCTCAGCGCGGTGCTAACGAACGCCGTGGAGGTGCACGATAACGAAGGGCGCGCCCTCGGAATCGCGGTTTTCGACCAAATCTTCTCTTGGATCAACCACAGTTGTTCCCCCAACGCCTGCTACCGCTTTGTCCTCTCTTCTTCTTCGCATTCCGGGGAAGCCAAACTTGGAATTGCTCCACACCTACAAATGAATAGTAGCGGGGTTAGTATTAGCAGTAGTGAATTTGCAAAAGGGGGCCTGGGTTATGGTCCAAGATTGGTTGTGAGGAGTATCAAGAAAATCAATAAGGGAGAAGAGGTCACTGTAGCCTATACGGATCTCTTGCAGCCTAAGGCAATGAGACAGTCAGAGCTATGGTCAAAGTATAGGTTCGTTTGTTGTTGCAAACGATGTAGTGCTCTGCCCTCTTCCTACGTGGATCATGCGTTGCAAGAAATTTCTGCTATCACTTGTGAATCATCTGGTTCATGTTCCAAGTTCCTCAAAGACATGGCTGATAGAAGATTGACTGAGTGCATTGATGATGTTATATTGGAGTATCTTTCTGTTGGTGATCCTGAGTCTTGTTGTGAGAAGCTTGAGGAGATACTCACACAAGGTCTAAAAGAGCACTTAGAAGTCATTGAAGTAAAACCAGATTGTATATTCATGCTGCATCCCCTACATCACCACTCTATAAAAGCATACACAACACTGGCTTCTGCATATAAAGTTTGTGCTTGTGATTTATTGTCTGTAGACTCTGAAACAGATATAAACCAATTAAAAGCTTTTGACATGAGCAGGATCAGTGCTGCGTATTCTTTGGTACTTGCAGGAGCAACTCATCATCTCTTCAATTCTGAATCCTCACTGATTGCATCTGTTGCAAATTTTTGGACAGGAGCTGGTGAATCTTTGTTATCTCTAAGCAAAAGTTCTGGATGGAGTATGTGTGTTAATTTGGGTCTTGTTATTCCAAACCTTGCTTCTGCCATGAAATTCAAATGTACAAAGTGCTCCTTAATGGATAGGTTTAGAGCTGGTATGTTAAATGGTCAAATTAAAAGTGCAGATTTTGAGAATGTATCAAATGAATTTCTTCATTGTGTCTCAGATATTACTCAGAAAGTTTGGGGTTTCCTTATCTCTGATTGCCAATTTTTGCAATCATGCAAAGATCCTATCATTTCCAGCTGGCTAATGTCTACCAAAAGTTCAAGTACAGTGGATGTTGAGGTTTGCGTTAACAAAACTAACATGTGTTACACCAATGAATCTGAAAATAGCGTCTCTATGTGTCATGAACAAACCTTAGCAGATCATGCAGTAGCATGCATTTTTCAGCTTGGCGTACACTGCTTAGCATATGGAGGATTATTGGCTAGCATTTGTTATGGCCCCCATTCACATTTGGTTTGTCATGTTCAAAATGTTCTAGAACATGAAAAGAATTTTGTATTATATTCTCATTAA

>Glyma.16g166500.2 sequence-type=CDS polypeptide=Glyma.16g166500.2.p locus=Glyma.16g166500 ID=Glyma.16g166500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGATGAGAAGCAAGGAAGAGATAGAAATAGGAAGAGACATAACAGCAACACTGACTCCTCTCTCTTTTTGTCTCCACACTTTCTATCTTCACACTCACTGCTCTGCTTGCTTCTCTTCCCTTCCAATTCCCAATCCCAATCCCAATCCCAATTCACTCTTCTATTGCTCCCCTCCATGCTCCGCCGCACTTTCACCTCTCCACCACTCCTCCGCCGAGCGCCACCTACCTCCCTCCGCTCACTCCTCCCACCTCTGTACCGCCCTCCGCCTCCTCCTCTCCCACCGCCCCACCTCCTCCTCCCGCCTCGCCGGCCTCCTCTCCAATCGCCACATCCTCACCTCCCTCTCTGTCCACGACGACGTTTCGGAGAGAATCAGCGTCGGTGCCGGCGCCATGGCAGAAGCGATCGCGAAGCAGCGCGGCATCCCCAACGACGACGCCGTTTTGGAGGAAGCCACGATTGCGCTCAGCGCGGTGCTAACGAACGCCGTGGAGGTGCACGATAACGAAGGGCGCGCCCTCGGAATCGCGGTTTTCGACCAAATCTTCTCTTGGATCAACCACAGTTGTTCCCCCAACGCCTGCTACCGCTTTGTCCTCTCTTCTTCTTCGCATTCCGGGGAAGCCAAACTTGGAATTGCTCCACACCTACAAGCAATGAGACAGTCAGAGCTATGGTCAAAGTATAGGTTCGTTTGTTGTTGCAAACGATGTAGTGCTCTGCCCTCTTCCTACGTGGATCATGCGTTGCAAGAAATTTCTGCTATCACTTGTGAATCATCTGGTTCATGTTCCAAGTTCCTCAAAGACATGGCTGATAGAAGATTGACTGAGTGCATTGATGATGTTATATTGGAGTATCTTTCTGTTGGTGATCCTGAGTCTTGTTGTGAGAAGCTTGAGGAGATACTCACACAAGGTCTAAAAGAGCACTTAGAAGTCATTGAAGTAAAACCAGATTGTATATTCATGCTGCATCCCCTACATCACCACTCTATAAAAGCATACACAACACTGGCTTCTGCATATAAAGTTTGTGCTTGTGATTTATTGTCTGTAGACTCTGAAACAGATATAAACCAATTAAAAGCTTTTGACATGAGCAGGATCAGTGCTGCGTATTCTTTGGTACTTGCAGGAGCAACTCATCATCTCTTCAATTCTGAATCCTCACTGATTGCATCTGTTGCAAATTTTTGGACAGGAGCTGGTGAATCTTTGTTATCTCTAAGCAAAAGTTCTGGATGGAGTATGTGTGTTAATTTGGGTCTTGTTATTCCAAACCTTGCTTCTGCCATGAAATTCAAATGTACAAAGTGCTCCTTAATGGATAGGTTTAGAGCTGGTATGTTAAATGGTCAAATTAAAAGTGCAGATTTTGAGAATGTATCAAATGAATTTCTTCATTGTGTCTCAGATATTACTCAGAAAGTTTGGGGTTTCCTTATCTCTGATTGCCAATTTTTGCAATCATGCAAAGATCCTATCATTTCCAGCTGGCTAATGTCTACCAAAAGTTCAAGTACAGTGGATGTTGAGGTTTGCGTTAACAAAACTAACATGTGTTACACCAATGAATCTGAAAATAGCGTCTCTATGTGTCATGAACAAACCTTAGCAGATCATGCAGTAGCATGCATTTTTCAGCTTGGCGTACACTGCTTAGCATATGGAGGATTATTGGCTAGCATTTGTTATGGCCCCCATTCACATTTGGTTTGTCATGTTCAAAATGTTCTAGAACATGAAAAGAATTTTGTATTATATTCTCATTAA

Predicted protein sequences of Glyma.16g166500

Limit To All Plant Sequences

>Glyma.16g166500.1.p sequence-type=predicted peptide transcript=Glyma.16g166500.1 locus=Glyma.16g166500 ID=Glyma.16g166500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEMRSKEEIEIGRDITATLTPLSFCLHTFYLHTHCSACFSSLPIPNPNPNPNSLFYCSPPCSAALSPLHHSSAERHLPPSAHSSHLCTALRLLLSHRPTSSSRLAGLLSNRHILTSLSVHDDVSERISVGAGAMAEAIAKQRGIPNDDAVLEEATIALSAVLTNAVEVHDNEGRALGIAVFDQIFSWINHSCSPNACYRFVLSSSSHSGEAKLGIAPHLQMNSSGVSISSSEFAKGGLGYGPRLVVRSIKKINKGEEVTVAYTDLLQPKAMRQSELWSKYRFVCCCKRCSALPSSYVDHALQEISAITCESSGSCSKFLKDMADRRLTECIDDVILEYLSVGDPESCCEKLEEILTQGLKEHLEVIEVKPDCIFMLHPLHHHSIKAYTTLASAYKVCACDLLSVDSETDINQLKAFDMSRISAAYSLVLAGATHHLFNSESSLIASVANFWTGAGESLLSLSKSSGWSMCVNLGLVIPNLASAMKFKCTKCSLMDRFRAGMLNGQIKSADFENVSNEFLHCVSDITQKVWGFLISDCQFLQSCKDPIISSWLMSTKSSSTVDVEVCVNKTNMCYTNESENSVSMCHEQTLADHAVACIFQLGVHCLAYGGLLASICYGPHSHLVCHVQNVLEHEKNFVLYSH*

>Glyma.16g166500.2.p sequence-type=predicted peptide transcript=Glyma.16g166500.2 locus=Glyma.16g166500 ID=Glyma.16g166500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEMRSKEEIEIGRDITATLTPLSFCLHTFYLHTHCSACFSSLPIPNPNPNPNSLFYCSPPCSAALSPLHHSSAERHLPPSAHSSHLCTALRLLLSHRPTSSSRLAGLLSNRHILTSLSVHDDVSERISVGAGAMAEAIAKQRGIPNDDAVLEEATIALSAVLTNAVEVHDNEGRALGIAVFDQIFSWINHSCSPNACYRFVLSSSSHSGEAKLGIAPHLQAMRQSELWSKYRFVCCCKRCSALPSSYVDHALQEISAITCESSGSCSKFLKDMADRRLTECIDDVILEYLSVGDPESCCEKLEEILTQGLKEHLEVIEVKPDCIFMLHPLHHHSIKAYTTLASAYKVCACDLLSVDSETDINQLKAFDMSRISAAYSLVLAGATHHLFNSESSLIASVANFWTGAGESLLSLSKSSGWSMCVNLGLVIPNLASAMKFKCTKCSLMDRFRAGMLNGQIKSADFENVSNEFLHCVSDITQKVWGFLISDCQFLQSCKDPIISSWLMSTKSSSTVDVEVCVNKTNMCYTNESENSVSMCHEQTLADHAVACIFQLGVHCLAYGGLLASICYGPHSHLVCHVQNVLEHEKNFVLYSH*

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