SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16g146500

Feature Type:gene_model
Chromosome:Gm16
Start:30930899
stop:30936487
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g146500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G23670.2AT LCB2 JGI N/AIEA
2.3.1.50EC serine C-palmitoyltransferase JGI N/AIEA
GO:0009058GO-bp biosynthetic process JGI N/AIEA
GO:0030170GO-mf pyridoxal phosphate binding JGI N/AIEA
K00654KEGG Amino acid related enzymes JGI N/AIEA
PTHR13693PantherFam CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE JGI N/AIEA
PF00155Pfam Aminotransferase class I and II JGI N/AIEA

Gene model name correspondences to Glyma.16g146500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g26210 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g146500
>Glyma.16g146500.1 sequence-type=CDS polypeptide=Glyma.16g146500.1.p locus=Glyma.16g146500 id=Glyma.16g146500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATTGCGATTCCGTATTTAACCGCCTTAACCACCTACTTCAGCTACGGGTTGCTCTTCGCCTTTGGCCAGTTCAGGGATTTCTTCCGGAAAATCTTCGACTGGTGCAGCGCCAACACTCTCCAGGGTTACGCGCCGATCTGCTTAGGGCTCGAAGATTTCTACATTCGCCGTTTGTACCTCCGAATTCAGGACTGTTTTGGGAGACCAATTGCAAGTGCTCCTGATGCTTGGTTTGATGTTGTCGAACGCTACTCGAATGATAACAACAAGACACTGAAACGGACTGATAAAATAAGTAGATGCCTTAATTTGGGATCATACAACTATCTTGGTTTTGCGGCAGCAGATGAATACTGCACACCTAGAGTAGTTGATACGTTGAAGAAGTATTCTCCTAGCACTTGCAGTACCCGTGTGGATGGGGGGACAACTGCACTTCACCTTGAACTGGAGGAGTGTGTTGCAAAATTTGTTGGGAAGCCAGCTGCTATAGTTTTTGGTATGGGCTATGTGACGAACTCTGCTATTCTTCCAGTCTTGATGGGAAAGGGAAATTTGATTATTAGTGATTCATTGAACCACAACTCAATTGTTAATGGTGCACGAGGATCAGGAGCAACAATTCGTGTTTTTCAACATAATGAGCCATCTCATCTAGAAGAAGTGTTGAGAGAACAAATTGCTGAGGGACAACCTAGGACACATAGGCCTTGGAAGAAGATAATGGTTATTGTGGAGGGGATATACAGCATGGAAGGAGAGCTTTGCAAACTTCCAGAGGTCATAGCTGTATGTAAAAAATACAAGGCTTATACATATTTGGACGAAGCACACAGCATTGGAGCTGTGGGCAAGACAGGAAGAGGTGTTTGTGAGCTCTTGGGTGTGGATACTGCTGATGTTGACATTATGATGGGAACATTCACCAAATCTTTTGGATCCTGTGGAGGTTACATTGCGGGATCTAAGGACCTTATCCAACACTTGAAGTACACTTGCCCTGCTCATCTTTATGCAACTTCAATTTCACCACCGGCTGCACAACAAATAATTTCATCCATAAGAGTTATTCTTGGAGAGGATGGTTCCAATAGAGGTGCCCAGAAACTTGCACAAATTCGAGAAAATAGCAACTTTTTCAGGTCAGAATTGCAGAAGATGGGATTTGAGGTTCTTGGGGATAATGATTCTCCAGTAATGCCAATCATGCTTTACAACCCCGCCAAAATCCCTGCCTTCTCAAGAGAGTGCCTCAAGCAGAATGTTGCTATTGTGACAGTGGCATTTCCTGCAACCCCACTGCTACTGGCTAGAGCACGTATATGCATATCTGCAGCTCATTCAAGGGAGGACCTTATCAAAGCCTTGCAGGTTATTAGCAGAGTGGGTGATCTTGTTGGCATAAAATACTTCCCTGCTGAACCAACAAAGCAGCAACAAGAAGGGGGTAAAACTGTGAAGTTTGATTGA
Predicted protein sequences of Glyma.16g146500
>Glyma.16g146500.1.p sequence-type=predicted peptide transcript=Glyma.16g146500.1 locus=Glyma.16g146500 id=Glyma.16g146500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MIAIPYLTALTTYFSYGLLFAFGQFRDFFRKIFDWCSANTLQGYAPICLGLEDFYIRRLYLRIQDCFGRPIASAPDAWFDVVERYSNDNNKTLKRTDKISRCLNLGSYNYLGFAAADEYCTPRVVDTLKKYSPSTCSTRVDGGTTALHLELEECVAKFVGKPAAIVFGMGYVTNSAILPVLMGKGNLIISDSLNHNSIVNGARGSGATIRVFQHNEPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTADVDIMMGTFTKSFGSCGGYIAGSKDLIQHLKYTCPAHLYATSISPPAAQQIISSIRVILGEDGSNRGAQKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNVAIVTVAFPATPLLLARARICISAAHSREDLIKALQVISRVGDLVGIKYFPAEPTKQQQEGGKTVKFD*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo